Flowcell  AC565BACXX
Run Start  2014-09-04
Read Length  50 single end
HiSeq Sequencing Kit Trueseq v3

Sequencer Software	HiSeq Control Software	2.0
Gerald version     1.8

Alignment Report:

Legend:
Total - total reads considered ( random 10% of total reads sequenced )
Total Unique - total reads aligning to only a single location in the reference
U0 - # of unique hits with 0 mismatches
U1 - # of unique hits with 1 mismatches
U2 - # of unique hits with 2 mismatches
R012 - # of hits aligning to multiple location in the reference with 0,1 or 2 mismatches
NM - # of reads without a match to the reference

Mapping Algorithm : GEM allowing up to 2 mismatches

Lane 7

Sample: day2 K27
Index: GGCTAC
Lab ID: 7918
Application: ChIP Seq
Reference: M.musculus (mm10)

Total	2630237
Total Unique	2113831	80.4%

U0	1944019	73.9%
U1	140752	5.4%
U2	29060	1.1%
R012	361934	13.8%
NM	124337	4.7%

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