Input file : cls.txID.sjs.hg38.buildLoci.tsv 
Output file for trans: cls.tx.supp 
Output file for genes: cls.gene.supp 
Annotation: cls.lncRNAs.hg38.chrOnly.buildLoci.gtf 
Validated sj file: /users/rg/buszczynska/Projects/intropolis/intropolis.intron.coord.hg38.tsv