# Command line has been read
# Input file1 is ont_Crg_CapTrap_Corr0_HpreCap_0+_HEK293T01.gtf
# Input file2 is ont_Crg_CapTrap_Corr0_HpreCap_1+_HEK293T01.gtf
sort: write failed: standard output: No space left on device
sort: write error
# I have treated (sorted and put in temp file) the input files according to what the user wants
# Hashtbl of transcripts has 6769866 keys/transcripts
# Hashtbl of transcripts has 1777802 keys/transcripts
# I have 6769866 initial transcripts in file1
# I have 1777802 initial transcripts in file2
# I have divided file1 and file2 transcripts intro sublists according to strand
# I have divided file1 and file2 transcripts intro sublists according to strand and chromosome