Information for 2-TTTTAACWCAAGGA (Motif 2)

A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
Reverse Opposite:
G A C T G A T C G T A C A C G T C G A T A C T G C G A T C T A G C G A T C A G T G T C A C G T A G C T A G T C A
p-value:1e-7
log p-value:-1.803e+01
Information Content per bp:1.706
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif13.56%
Number of Background Sequences with motif370.2
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets107.1 +/- 57.9bp
Average Position of motif in Background97.4 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTTTAACWCAAGGA
ATTTAACATA----
A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
C G A T C G A T C G A T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

AT3G10030/MA1662.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTTAACWCAAGGA
AGTTAACAGAAAT-
A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
G C T A C T A G G C A T G C A T T C G A C T G A G A T C C T G A C A T G G C T A C T G A C G T A G C A T A C G T

AT3G25990(Trihelix)/colamp-AT3G25990-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTTAACWCAAGGA
--TTAACCATAG--
A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
A C G T A C G T A G C T G C A T C T G A T G C A A G T C G A T C T C G A C A G T C T G A T C A G A C G T A C G T

FNE(RRM)/Drosophila_melanogaster-RNCMPT00120-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTTTAACWCAAGGA
----AACNAAA---
A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
A C G T A C G T A C G T A C G T C G T A C G T A G T A C G A C T G T C A C G T A C G T A A C G T A C G T A C G T

AT-GTL1/MA1661.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAACWCAAGGA
NNTTTTAACCNT----
A C G T A C G T A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
G C T A G C A T G C A T G C A T C G A T G C A T G C T A G T C A G A T C G A T C C G T A G C A T A C G T A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTTTAACWCAAGGA
CCTTAGTTAACTAAAAT-
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T A C G T

KHDRBS1(KH)/Mus_musculus-RNCMPT00062-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAACWCAAGGA
CCTTTTA---------
A C G T A C G T A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
A T G C A T G C A C G T C G A T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTAACWCAAGGA
TTTTTA---------
A C G T A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
C G A T A C G T C G A T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTTTAACWCAAGGA
ACTTAGTTAACTAAAAA-
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A A C G T

RBP9(RRM)/Drosophila_melanogaster-RNCMPT00132-PBM/HughesRNA

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTTTAACWCAAGGA
----AACCAAA---
A C G T C G A T A C G T A C G T G T C A C G T A A G T C C G T A T G A C C G T A G T C A C A T G C T A G C T G A
A C G T A C G T A C G T A C G T C G T A C G T A G T A C G A T C G C T A C G T A C G T A A C G T A C G T A C G T