Information for 18-CACAGCCTTCTGGG (Motif 22)

A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G
Reverse Opposite:
G T A C G T A C A G T C C G T A A C T G T C G A C G T A C T A G A C T G A G T C A G C T A C T G A C G T A C T G
p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.816
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets96.3 +/- 48.5bp
Average Position of motif in Background87.9 +/- 44.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG----
---RGSMTBCTGGGAAAT
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG
---NNCCTGCTGNG
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Zic2/MA1629.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG--
--CCCCCTGCTGTGNN
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG
--CCCCCTGCTGTG
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG
----GCCTTCT---
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG---
--TNTCCTGCTGTGNNG
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CACAGCCTTCTGGG-
-----CCTGCTGAGH
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG---
--TCNCCTGCTGNGNNN
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTTCTGGG---
--NNTCCTGCTGTGNNN
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CACAGCCTTCTGGG
----GCCATCTGTT
A G T C C G T A T A G C C T G A C T A G A G T C G A T C C G A T A C G T G T A C A C G T A C T G A C T G A C T G
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T