Information for 3-RACGTCAA (Motif 3)

C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
Reverse Opposite:
C G A T G A C T C T A G G C T A A T G C T A C G C A G T G A T C
p-value:1e-22
log p-value:-5.278e+01
Information Content per bp:1.571
Number of Target Sequences with motif262.0
Percentage of Target Sequences with motif58.48%
Number of Background Sequences with motif15929.3
Percentage of Background Sequences with motif35.25%
Average Position of motif in Targets91.3 +/- 53.8bp
Average Position of motif in Background100.8 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SKO1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.88
Offset:1
Orientation:forward strand
Alignment:RACGTCAA
-ACGTCA-
C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:RACGTCAA
-ACGTCA-
C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T

CST6/MA0286.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-RACGTCAA
TTACGTCAT
A C G T C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
G A C T C A G T C G T A A G T C A C T G A C G T G T A C C G T A A G C T

TGA6/MA1069.1/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-RACGTCAA-
TGACGTCATN
A C G T C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A A C G T
A G C T A C T G C G T A A G T C A C T G A C G T A G T C C G T A A C G T G T A C

bZIP910/MA0096.1/Jaspar

Match Rank:5
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:RACGTCAA
-ACGTCAG
C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
A C G T C G T A A G T C A C T G A C G T A G T C C G T A A C G T

TGA1A/MA0129.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:RACGTCAA
TACGTCA-
C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
G A C T C G T A A G T C C T A G C G A T A G T C C G T A A C G T

bZIP50(bZIP)/colamp-bZIP50-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-RACGTCAA-
TGACGTCATC
A C G T C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A A C G T
G C A T A C T G C G T A A G T C T C A G G C A T G T A C C T G A A C G T G T A C

TGA10(bZIP)/colamp-TGA10-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:RACGTCAA
GACGTCAT
C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A
A C T G C T G A A G T C C T A G A C G T G T A C C G T A A G C T

TGA2/MA1068.1/Jaspar

Match Rank:9
Score:0.81
Offset:1
Orientation:forward strand
Alignment:RACGTCAA-
-ACGTCATC
C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A A C G T
A C G T C T G A A G T C T C A G G C A T T G A C C T G A A C G T T A G C

TGA6(bZIP)/colamp-TGA6-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-RACGTCAA-
TGACGTCABC
A C G T C T A G G T C A A T G C A T C G C G A T G A T C C T G A G C T A A C G T
G A C T A T C G C T G A A G T C T C A G G A C T G T A C C T G A A G C T G T A C