Information for 7-CAGTATTGATTT (Motif 7)

A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T C G T A A G T C A C G T A C T G
p-value:1e-20
log p-value:-4.692e+01
Information Content per bp:1.965
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.7 +/- 38.5bp
Average Position of motif in Background115.1 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CAGTATTGATTT---
NNTTTATTGATTTTTT
A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CAGTATTGATTT---
-NTTATTGATTTTTT
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CAGTATTGATTT---
-ATTATCGATTTTTT
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CAGTATTGATTT--
----ATTGATTYND
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CAGTATTGATTT-
---NNTTGATTTG
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A C G G A C T A C G T A C T G C G T A A C G T A C G T C G A T T C A G

SPT23/SPT23_YPD/[](Harbison)/Yeast

Match Rank:6
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CAGTATTGATTT-
-----TTGATTTC
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T T A C G C T G A C G A T G A C T A G C T A G T C

SPT23(MacIsaac)/Yeast

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CAGTATTGATTT-
-----TTGATTTC
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T T A C G C T G A C G A T G A C T A G C T A G T C

onecut/MA0235.1/Jaspar

Match Rank:8
Score:0.69
Offset:5
Orientation:forward strand
Alignment:CAGTATTGATTT
-----TTGATTT
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C G A T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CAGTATTGATTT
---TATTGAYY-
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

ceh-38/MA1699.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAGTATTGATTT----
AATTATCGATTTTTTN
A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T A C G T C G T A G A C T G A T C C A T G C T G A G A C T G C A T C G A T G C A T G A C T G A C T C A G T