Information for 8-CBTTTCTGAAAT (Motif 8)

A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
Reverse Opposite:
C G T A C G A T C G A T G C A T G T A C G T C A C T A G G T C A G C T A C G T A T A G C T A C G
p-value:1e-10
log p-value:-2.471e+01
Information Content per bp:1.690
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif10.14%
Number of Background Sequences with motif75.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets111.9 +/- 64.2bp
Average Position of motif in Background105.7 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PTBP1(RRM)/Homo_sapiens-RNCMPT00268-PBM/HughesRNA

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CBTTTCTGAAAT
CTTTTCT-----
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
G T A C A G C T A C G T A C G T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

kni/dmmpmm(Down)/fly

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CBTTTCTGAAAT
--TTTTTG----
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
A C G T A C G T C G A T G A C T G A C T G C A T G A C T C A T G A C G T A C G T A C G T A C G T

Nab2p(Znf)/Saccharomyces_cerevisiae-RNCMPT00042-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CBTTTCTGAAAT
CTTTTTT-----
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
A G T C G A C T A C G T A G C T A C G T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CBTTTCTGAAAT--
ANATTTTTGCAANTN
A C G T A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CPEB2(RRM)/Homo_sapiens-RNCMPT00012-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CBTTTCTGAAAT
CTTTTTT-----
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
A G T C G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tv_0257(RRM)/Trichomonas_vaginalis-RNCMPT00257-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CBTTTCTGAAAT
TTTTTCT-----
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
A G C T A G C T A C G T A C G T A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PTBP1(RRM)/Homo_sapiens-RNCMPT00269-PBM/HughesRNA

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CBTTTCTGAAAT
ACTTTCT-----
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
G T C A A G T C A C G T C G A T C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

dof42(C2C2dof)/col-dof42-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CBTTTCTGAAAT
GCCTTTTT-----
A C G T A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
C T A G A G T C A G T C A C G T A C G T A C G T C G A T G C A T A C G T A C G T A C G T A C G T A C G T

Unknown6/Drosophila-Promoters/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CBTTTCTGAAAT-
---TTTTAAAATT
A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T A C G T
A C G T A C G T A C G T C G A T A C G T A C G T G A C T T C G A C T G A C G T A C G T A C G A T G C A T

SEP3(MADS)/Arabidoposis-Flower-Sep3-ChIP-Seq/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CBTTTCTGAAAT
CCCTTTTTGG---
A C G T A T G C A T C G C G A T C G A T A C G T A G T C A C G T C A T G C G T A G C T A G C T A G C A T
G A T C G A T C G A T C G C A T G C A T C G A T C G A T C A G T C A T G C A T G A C G T A C G T A C G T