Information for 5-TGATGAAGAA (Motif 6)

C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
Reverse Opposite:
G C A T C G A T A G T C C G A T A G C T T A G C G C T A A G C T G T A C G C T A
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.677
Number of Target Sequences with motif91.0
Percentage of Target Sequences with motif23.64%
Number of Background Sequences with motif5742.7
Percentage of Background Sequences with motif12.00%
Average Position of motif in Targets79.8 +/- 55.5bp
Average Position of motif in Background98.7 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TGATGAAGAA-
-GATGATGATG
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A A C G T
A C G T C T A G C T G A C G A T T C A G C T G A C A G T A T C G C T G A C A G T A T C G

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:2
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TGATGAAGAA-
----GAAGAAG
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G C G T A C T G A A T C G C G T A C G T A A T C G

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGATGAAGAA-
-RAAGAMGAMG
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A A C G T
A C G T C T A G C T G A T G C A C T A G C G T A G T A C C T A G T G C A G T C A T A C G

LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGATGAAGAA
---NGGAGAA
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
A C G T A C G T A C G T G T A C A C T G A C T G C G T A A C T G C G T A C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TGATGAAGAA
---NGAAGC-
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGATGAAGAA
TGATGGAW--
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGATGAAGAA
-GATGGAGT-
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
A C G T A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGATGAAGAA
---AGAAGAN
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
A C G T A C G T A C G T C G T A C T A G C G T A C G T A T C A G C G T A A G T C

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGATGAAGAA-
---AGGAGANG
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A A C G T
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C T A G C T A G

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGATGAAGAA
-GATGATN--
C G A T C A T G T C G A C G A T A T C G T C G A C G T A A C T G G C T A C G T A
A C G T A C T G C G T A A C G T A T C G C G T A C G A T C G A T A C G T A C G T