Information for 8-TGTAARTCASACWM (Motif 12)

A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
Reverse Opposite:
A C G T C G A T A C T G C G A T A T G C A C G T A C T G C G T A A G C T A C G T A C G T C T G A A G T C C G T A
p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.883
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.4 +/- 59.1bp
Average Position of motif in Background100.9 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PUM(PUF)/Drosophila_melanogaster-RNCMPT00105-PBM/HughesRNA

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGTAARTCASACWM
TGTAATT-------
A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
A C G T A C T G A C G T C G T A G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PUM(PUF)/Drosophila_melanogaster-RNCMPT00103-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGTAARTCASACWM
TGTAAAT-------
A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
A C G T A C T G A C G T C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTAARTCASACWM
SCTGTCAVTCAV----
A C G T A C G T A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T

PUM(PUF)/Drosophila_melanogaster-RNCMPT00104-PBM/HughesRNA

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTAARTCASACWM
TGTAAAT-------
A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
A C G T A C T G A C G T C G T A G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTAARTCASACWM
NCTGTCAATCAN----
A C G T A C G T A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T

YPR013C/MA0434.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTAARTCASACWM
TGTAGATCA-----
A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
A G C T A C T G G A C T G T C A C T A G C G T A A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTAARTCASACWM
NCYATMAATCAY----
A C G T A C G T A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGTAARTCASACWM
NNGCTGTCACTCANN---
A C G T A C G T A C G T A C G T A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTAARTCASACWM
GSCTGTCACTCA-----
A C G T A C G T A C G T A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T A C G T A C G T

SUP-12(RRM)/Caenorhabditis_elegans-RNCMPT00179-PBM/HughesRNA

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TGTAARTCASACWM
------TCACACA-
A C G T A C T G A G C T C G T A C G T A C T G A A C G T A G T C C G T A A T C G C G T A A G T C C G T A G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G T C C G T A A G T C C G T A A G T C C G T A A C G T