Information for 12-CAYTCGTGTA (Motif 9)

G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A G T C A C T G C T G A C T A G A C G T A C T G
p-value:1e-7
log p-value:-1.620e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets85.4 +/- 84.4bp
Average Position of motif in Background98.3 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lm_0223(RRM)/Leishmania_major-RNCMPT00223-PBM/HughesRNA

Match Rank:1
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:CAYTCGTGTA-
----CGTGTAA
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G A T C G T A G T C A

MATALPHA2/MA0328.2/Jaspar

Match Rank:2
Score:0.75
Offset:4
Orientation:forward strand
Alignment:CAYTCGTGTA--
----CGTGTAAT
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T A G A G C T C T A G A C G T C G T A G C T A G C A T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00091-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CAYTCGTGTA
--NTTGTGT-
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A
A C G T A C G T A G C T A G C T A G C T A C T G A C G T A C T G A C G T A C G T

MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA

Match Rank:4
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:CAYTCGTGTA--
-----GTGTAAT
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G C T C G T A G C T A A G C T

ABF3/MA0930.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CAYTCGTGTA
-ACACGTGT-
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A
A C G T C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T

HMRA2/MA0318.1/Jaspar

Match Rank:6
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CAYTCGTGTA--
----CATGTAAT
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C T G A C G A T A C T G A C G T C G T A C G T A C G A T

BZR1/MA0550.2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAYTCGTGTA---------
CCACACGTGCGACTTTTTTT
A C G T G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A A G T C C G T A A G T C A C T G C G A T A C T G A G T C C T A G G C T A G T A C G A C T A G C T G C A T G A C T G C A T G C A T A G C T

BEH2/MA1332.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAYTCGTGTA
TCACACGTGCG
A C G T G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A
A G C T A G T C T C G A A G T C C G T A A G T C A C T G A C G T A C T G A G T C C T A G

BEH3/MA1333.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAYTCGTGTA
TCACACGTGCG
A C G T G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A
A G C T A T G C T C G A A G T C C G T A A G T C A C T G A C G T C T A G A G T C T C A G

ABF2/MA0941.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAYTCGTGTA---
NNCACGTGTCNNN
G T A C C G T A A G T C A G C T A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C G T A C G T
C G T A G T C A A G T C C G T A A G T C C T A G A C G T C T A G A C G T G A T C C T G A A C G T A C T G