p-value: | 1e-6 |
log p-value: | -1.497e+01 |
Information Content per bp: | 1.589 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 12.35% |
Number of Background Sequences with motif | 724.1 |
Percentage of Background Sequences with motif | 1.46% |
Average Position of motif in Targets | 82.4 +/- 57.1bp |
Average Position of motif in Background | 103.4 +/- 53.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MOT2/MA0379.1/Jaspar
Match Rank: | 1 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAATATATRCWGGT --ATATA------- |
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RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA
Match Rank: | 2 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAATATATRCWGGT --ATATATA----- |
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RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAATATATRCWGGT NTATATA------- |
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SHEP(RRM)/Drosophila_melanogaster-RNCMPT00174-PBM/HughesRNA
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CAATATATRCWGGT TAATATA------- |
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SUP-26(RRM)/Caenorhabditis_elegans-RNCMPT00182-PBM/HughesRNA
Match Rank: | 5 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CAATATATRCWGGT --ATATTTA----- |
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SPT15/MA0386.1/Jaspar
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CAATATATRCWGGT---- NNNNAATATATATANCTANNN |
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Arid5a/MA0602.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CAATATATRCWGGT NNTNNCAATATTAG----- |
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PB0002.1_Arid5a_1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----CAATATATRCWGGT NNTNNCAATATTAG----- |
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CBF(- other)/several species/AthaMap
Match Rank: | 9 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CAATATATRCWGGT AATTCCAATTATA------ |
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NHP6A/MA0345.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----CAATATATRCWGGT-- ATGACCTATATATAAAAATGA |
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