Information for 11-GGGATC (Motif 27)

A C T G A C T G A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.194e+01
Information Content per bp:1.530
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif7.31%
Number of Background Sequences with motif2202.2
Percentage of Background Sequences with motif4.72%
Average Position of motif in Targets98.0 +/- 44.2bp
Average Position of motif in Background98.5 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:GGGATC--
NGGATTAN
A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

GATA15/MA1016.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGGATC---
NNGATCANN
A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A G T C G A C T T A C G C G T A C G A T A G T C C T G A G A C T T C G A

GATA8/MA1017.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGGATC--
NNAGATCTN
A C G T A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T
A G T C A G C T T C G A T C A G C T G A G C A T A G T C A C G T T A C G

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGGATC--
-TGATCTG
A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T
A C G T C A G T A C T G C G T A A C G T A G T C A C G T A C T G

MZF1/MA0056.2/Jaspar

Match Rank:5
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----GGGATC--
NNNTGGGGATTNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGATC----
TNGATCNDNM
A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G C A T G A T C T C A G G C T A G A C T A G T C C T A G C G T A C A T G G T C A

GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGGATC---
-TGATCATM
A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T G A C T A T C G G T C A G A C T A T G C C G T A C G A T G T C A

ECM23/MA0293.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGGATC---
NNNAGATCTNN
A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T C T G A T C A G C G T A A C G T A G T C A C G T A C G T A C G T

GAT4/MA0302.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGGATC---
NNTAGATCTNN
A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A C T G C G T A C G A T A G T C A G C T C A G T A G C T

GAT3/MA0301.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGGATC-
NNTAGATCT
A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C A C G T
A C G T A C T G A C G T C T G A C A T G G C T A C G A T A G T C A G C T