Information for 17-ATGTTTGGYTGT (Motif 16)

G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
Reverse Opposite:
C G T A T G A C C G T A C T G A A G T C A G T C C G T A G T C A C G T A A G T C G T C A A C G T
p-value:1e-12
log p-value:-2.961e+01
Information Content per bp:1.814
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets138.2 +/- 26.4bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBP9(RRM)/Drosophila_melanogaster-RNCMPT00132-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:ATGTTTGGYTGT
---TTTGGTT--
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C G T A C G T A C G T A C G T

HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATGTTTGGYTGT
--BTTTGGTTTG
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T A C G T A C T G A C G T C G A T C A G T C A T G C A T G C A G T G C A T C A G T C A T G

FNE(RRM)/Drosophila_melanogaster-RNCMPT00120-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ATGTTTGGYTGT
---TTTNGTT--
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T A C G T A C G T C G A T A C G T C A G T C T G A A C T G A C G T A C G T A C G T A C G T

HAP2/MA0313.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ATGTTTGGYTGT
----TTGGT---
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A C G T A C G T A C G T

RAP1/MA0359.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGTTTGGYTGT
-TGTATGGGTG-
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T C A G T C A T G G A C T C G T A G A C T C T A G A C T G C T A G C G A T A C T G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATGTTTGGYTGT-
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C G T G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RAP1(MacIsaac)/Yeast

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATGTTTGGYTGT
GTGTATGGGTGT
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
C T A G A C G T C A T G G A C T T C G A G A C T T C A G A T C G T C A G A G C T A C T G A G C T

HuR(RRM)/Homo_sapiens-RNCMPT00117-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATGTTTGGYTGT
---TTTGTTT--
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C A G A C G T A G C T A C G T A C G T A C G T

BOS1(MYB)/col-BOS1-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGTTTGGYTGT
-AGTTAGGYNN-
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T C G T A C T A G A C G T G C A T G C T A T C A G T A C G A G T C G T C A T C A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGTTTGGYTGT
-NNTGTGGTTT-
G T C A C A G T T A C G A C G T A C G T A C G T A C T G A C T G A G C T A C G T A C T G A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T