Information for 3-GGTGAG (Motif 3)

A C T G A C T G A C G T C T A G C G T A A C T G
Reverse Opposite:
G T A C A C G T A G T C C G T A A G T C A G T C
p-value:1e-35
log p-value:-8.195e+01
Information Content per bp:1.913
Number of Target Sequences with motif551.0
Percentage of Target Sequences with motif36.64%
Number of Background Sequences with motif10409.0
Percentage of Background Sequences with motif22.33%
Average Position of motif in Targets128.3 +/- 49.1bp
Average Position of motif in Background99.5 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GGTGAG
NTGGTGAN
A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G
C T G A C G A T C A T G A T C G G C A T C A T G G C T A A G T C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--GGTGAG---
CAGGTAAGTAT
A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G A C G T A C G T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

AGL55/MA1202.1/Jaspar

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAG
TGGTGA-
A C G T A C T G A C T G A C G T C T A G C G T A A C T G
A C G T A C T G A C T G A C G T A C T G T C G A A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GGTGAG
GTGGGGTGAT
A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:5
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GGTGAG--
GGAGGAGGTGAGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G A C G T A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

MYB41(MYB)/col-MYB41-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAG-
TTAGGTRARV
A C G T A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G A C G T
A C G T A C G T C G T A A C T G A C T G A C G T T C A G C T G A T C A G T G C A

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGTGAG-
GNMCAGGTGTGC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G A C G T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGAG
NNGCAGGTGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

At1g75490(AP2EREBP)/colamp-At1g75490-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGTGAG
AGKCGGTG--
A C G T A C G T A C G T A C G T A C T G A C T G A C G T C T A G C G T A A C T G
C G T A C T A G C A G T A G T C A C T G A C T G A G C T A C T G A C G T A C G T

z/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGTGAG--
--TGAGTG
A C T G A C T G A C G T C T A G C G T A A C T G A C G T A C G T
A C G T A C G T A G C T A C T G C G T A A C T G G A C T A C T G