Information for 22-ATCGAACTAC (Motif 20)

C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C G T A C G T A G T C A C T G C G T A A C G T
p-value:1e-9
log p-value:-2.208e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.2 +/- 26.1bp
Average Position of motif in Background53.5 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:ATCGAACTAC-
---CAACTACN
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A T G C C G T A C G T A A G T C A C G T C G T A A G T C C T A G

MSI(RRM)/Drosophila_melanogaster-RNCMPT00040-PBM/HughesRNA

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:ATCGAACTAC-
----AACTACT
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A G T C A A G T C A C G T C G T A A G T C C G A T

RBM42(RRM)/Homo_sapiens-RNCMPT00151-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ATCGAACTAC-
----AACTAAG
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A G T C A A C T G

MYB30(MYB)/colamp-MYB30-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATCGAACTAC--
--CCAACTACCT
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T G A T C G A T C C G T A G T C A G A T C G A C T C T G A G T A C G A T C G C A T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00099-PBM/HughesRNA

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ATCGAACTAC-
----ACCTACT
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A G T A C A G T C A C G T C G T A A G T C A C G T

MSI1(RRM)/Homo_sapiens-RNCMPT00176-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATCGAACTAC
--CTAACTA-
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C
A C G T A C G T A G T C A G C T G C T A G T C A A G T C A C G T C G T A A C G T

MSI1(RRM)/Homo_sapiens-RNCMPT00041-PBM/HughesRNA

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATCGAACTAC
--CTAACTA-
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C
A C G T A C G T A G T C A G C T C G T A G C T A A G T C A C G T C G T A A C G T

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATCGAACTAC-
----ATCTACT
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A G A C T A G T C A C G T C G T A A G T C C G A T

HSF1/MA0319.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCGAACTAC
ATGGAACA--
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C
T C G A A C G T C T A G A C T G C G T A C G T A A G T C C T G A A C G T A C G T

OPI1/Literature(Harbison)/Yeast

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATCGAACTAC
-TCGAACC--
C G T A A C G T A G T C A C T G C G T A C G T A A G T C A C G T C G T A A G T C
A C G T A C G T A G T C A C T G C G T A C G T A A G C T A G T C A C G T A C G T