Information for 25-TGCCCCTGTAGT (Motif 24)

A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
Reverse Opposite:
G C T A T A G C G C A T C G T A A G T C C G T A C A T G C T A G C T A G A C T G T A G C C G T A
p-value:1e-15
log p-value:-3.588e+01
Information Content per bp:1.759
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.6 +/- 56.7bp
Average Position of motif in Background126.0 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USV1/MA0413.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGCCCCTGTAGT----
AAATTCCCCCTGAATTTGTG
A C G T A C G T A C G T A C G T A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A G C T C A G T T G A C A T G C A G T C G T A C G A T C A G C T A C T G C T G A G T C A G A C T G A C T C G A T A C T G C A G T T A C G

SNAI2/MA0745.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCCCCTGTAGT
ATGCACCTGTCAT
A C G T A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

REI1/MA0364.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCCCCTGTAGT
--CCCCTGA---
A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
A C G T A C G T A G T C G T A C A G T C A G T C A C G T A C T G C T G A A C G T A C G T A C G T

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGCCCCTGTAGT--
------NGTAGTTG
A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G A C G T C G T A A C T G A C G T C G A T A T C G

MSN2(MacIsaac)/Yeast

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCCCCTGTAGT
-GCCCCTT----
A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
A C G T T A C G G A T C A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCCCCTGTAGT
TGCACCTGTT--
A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T A C G T A C G T

sna/MA0086.2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCCTGTAGT
NTGCACCTGTTNN
A C G T A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
C A G T G C A T T C A G G A T C G T C A G A T C G A T C G A C T A T C G G A C T G A C T T C A G G T A C

MSN4/Literature(Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCCCCTGTAGT
-NCCCCTG----
A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

msn-1/MA1433.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCCCCTGTAGT
-CCCCCTGA---
A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
A C G T T G A C A G T C A G T C A G T C G A T C G C A T C A T G C G T A A C G T A C G T A C G T

Med/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCCTGTAGT
ACTGCGCCTG----
A C G T A C G T A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T
C T A G G A T C A C G T A C T G A T G C A T C G T A G C A T C G A G C T A T C G A C G T A C G T A C G T A C G T