Information for 1-AACATGGCGG (Motif 1)

C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G
Reverse Opposite:
G T A C G A T C C T A G A G T C G A T C C G T A A C G T A T C G G C A T A C G T
p-value:1e-35
log p-value:-8.080e+01
Information Content per bp:1.875
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif11.95%
Number of Background Sequences with motif237.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets105.6 +/- 38.7bp
Average Position of motif in Background101.2 +/- 67.5bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-AACATGGCGG-
CAAGATGGCGGC
A C G T C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-AACATGGCGG-
CAAGATGGCGGC
A C G T C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.2/Jaspar

Match Rank:3
Score:0.86
Offset:1
Orientation:forward strand
Alignment:AACATGGCGG--
-AGATGGCGGCG
C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T
A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

ZFP42/MA1651.1/Jaspar

Match Rank:4
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AACATGGCGG------
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

pho/MA1460.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AACATGGCGG--
-AAATGGCCGCC
C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T
A C G T G T C A C T G A T G C A A G C T A T C G A C T G G T A C A T G C C T A G G T A C A G T C

RAP212(AP2EREBP)/col-RAP212-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AACATGGCGG--
AAAATGGCGGCG
C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T
C T G A G C T A C G T A C T G A G A C T C A T G C T A G A G T C A C T G T A C G A G T C C A T G

AT4G18450(AP2EREBP)/col-AT4G18450-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AACATGGCGG---
---ATGGCGGCKG
C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C T G T C A G

ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AACATGGCGG--
----TGGCGGCT
C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AACATGGCGG------
NAGANTGGCGGGGNGNA
A C G T C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ERF1B/MA0567.1/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AACATGGCGG--
----TGGCGGCG
C G T A C G T A A T G C C G T A A C G T C T A G A C T G A G T C C T A G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C T G C T A G G A T C A C T G T A C G A G T C A C T G