Information for 2-BCGCCGTC (Motif 4)

A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C
Reverse Opposite:
C T A G C T G A A T G C A C T G T C A G A G T C A T C G T G C A
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.539
Number of Target Sequences with motif123.0
Percentage of Target Sequences with motif32.45%
Number of Background Sequences with motif8896.1
Percentage of Background Sequences with motif18.64%
Average Position of motif in Targets84.0 +/- 54.8bp
Average Position of motif in Background100.0 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF11/MA1001.2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-BCGCCGTC---
GCCGCCGTCATC
A C G T A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C A C G T A C G T A C G T
C A T G A T G C G T A C C A T G A T G C G T A C C T A G G A C T G A T C C T G A G A C T G T A C

ERF4/MA0992.2/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-BCGCCGTC---
GCCGCCGTCATA
A C G T A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C A C G T A C G T A C G T
C A T G A T G C G T A C C T A G A G T C T G A C C T A G G A C T G A T C C T G A G A C T G C T A

Rbm4.3(RRM)/Danio_rerio-RNCMPT00248-PBM/HughesRNA

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:BCGCCGTC
TCGTCGTN
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C
A C G T A G T C A C T G A G C T A G T C A C T G A G C T A G C T

RBM45(RRM)/Homo_sapiens-RNCMPT00241-PBM/HughesRNA

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:BCGCCGTC
-TGTCGTC
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C
A C G T A C G T A C T G A G C T G T A C A T C G A C G T A G T C

ERF10(AP2EREBP)/col-ERF10-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:BCGCCGTC--
CCGCCGCCAY
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C A C G T A C G T
A G T C G T A C A C T G A G T C A G T C C T A G A G T C G T A C C G T A G A T C

SRSF7(RRM,Znf)/Homo_sapiens-RNCMPT00073-PBM/HughesRNA

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:BCGCCGTC
NCGTCGTC
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C
A G T C A G T C A C T G A C G T A G T C A C T G A C G T A G T C

ERF7(AP2EREBP)/col-ERF7-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:BCGCCGTC--
CCGCCGYCAT
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C A C G T A C G T
G A T C G T A C A C T G A G T C A G T C C T A G G A T C G T A C C T G A G C A T

ERF8(AP2EREBP)/colamp-ERF8-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:BCGCCGTC---
-CGCCGYCATW
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C A C G T A C G T A C G T
A C G T G T A C A C T G A T G C T G A C C T A G G A C T G T A C C G T A G C A T G C A T

ERF4(AP2EREBP)/colamp-ERF4-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:BCGCCGTC----
CCGCCGCCAWHW
A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C A C G T A C G T A C G T A C G T
A G T C T G A C C T A G A G T C G T A C C T A G G A T C G T A C C G T A G C A T G C A T C G A T

LEP(AP2EREBP)/col-LEP-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--BCGCCGTC
CDCCGCCGTC
A C G T A C G T A C G T T A G C T C A G A G T C T G A C T A C G G A C T G A T C
G A T C C A G T T A G C A G T C A C T G A G T C A G T C C T A G G A C T G T A C