p-value: | 1e-6 |
log p-value: | -1.572e+01 |
Information Content per bp: | 1.935 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 4.35% |
Number of Background Sequences with motif | 7.1 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 55.8 +/- 56.2bp |
Average Position of motif in Background | 95.4 +/- 71.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.33 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GCR1/MA0304.1/Jaspar
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TGTCTTCCAGAT -GGCTTCCA--- |
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ARF1(ABI3/VP1)/Arabidopsis thaliana/AthaMap
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTCTTCCAGAT CTTGTCTCCCA--- |
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HSF1/MA0319.1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TGTCTTCCAGAT --TGTTCCAT-- |
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Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTCTTCCAGAT TGTCTGDCACCT |
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ARF10/MA1685.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGTCTTCCAGAT- NGTGTCTCCCNTTNG |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTCTTCCAGAT CTGTCTGTCACCT |
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NFATC2/MA0152.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTCTTCCAGAT --TTTTCCA--- |
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GCR1(MacIsaac)/Yeast
Match Rank: | 8 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGTCTTCCAGAT GGGCTTCCA--- |
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GCR2/MA0305.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TGTCTTCCAGAT --GCTTCCT--- |
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SFL1/MA0377.1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGTCTTCCAGAT---- TNTTATTTCTTCTATNNNNNA |
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