Information for 6-CAAACTACACTA (Motif 6)

A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G A C G T G T C A A C T G A C G T A C G T A C G T A C T G
p-value:1e-23
log p-value:-5.384e+01
Information Content per bp:1.939
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.9 +/- 31.1bp
Average Position of motif in Background100.3 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAAACTACACTA
-CAACTACN---
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
A C G T A T G C C G T A C G T A A G T C A C G T C G T A A G T C C T A G A C G T A C G T A C G T

RBM28(RRM)/Homo_sapiens-RNCMPT00049-PBM/HughesRNA

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAAACTACACTA
---TCTACTC--
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
A C G T A C G T A C G T G C A T A G T C A C G T C G T A A G T C C G A T A G T C A C G T A C G T

SFPQ(RRM)/Homo_sapiens-RNCMPT00177-PBM/HughesRNA

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAAACTACACTA
-ACACTAC----
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
A C G T G T C A G T A C G C T A G A T C G A C T G T C A G T A C A C G T A C G T A C G T A C G T

PUM(PUF)/Drosophila_melanogaster-RNCMPT00105-PBM/HughesRNA

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAAACTACACTA
--AATTACA---
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
A C G T A C G T C G T A G C T A C G A T A C G T C G T A A G T C C G T A A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAACTACACTA
NAAACCACAG--
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAACTACACTA
TCCAAAGTCCAAA-
A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAACTACACTA
TCCAAAGTCCAGA-
A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T

MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAAACTACACTA
---ATTACAC--
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
A C G T A C G T A C G T C T G A C G A T A C G T C T G A A G T C C G T A A G T C A C G T A C G T

HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAAACTACACTA
CAAACCAAAV--
A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
G T A C G T C A C G T A G T C A G T A C G T A C G T C A G C T A T G C A T G A C A C G T A C G T

dHNF4(NR)/Fly-HNF4-ChIP-Seq(GSE73675)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CAAACTACACTA
GGTCCAAAGTCCAMT-
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T G T C A A G T C C G T A A G T C A C G T G T C A
T C A G A C T G C A G T A G T C A G T C G T C A C G T A C G T A A C T G C A G T A G T C A G T C C T G A T G C A A G C T A C G T