p-value: | 1e-2 |
log p-value: | -6.127e+00 |
Information Content per bp: | 1.952 |
Number of Target Sequences with motif | 30.0 |
Percentage of Target Sequences with motif | 50.85% |
Number of Background Sequences with motif | 15994.6 |
Percentage of Background Sequences with motif | 32.14% |
Average Position of motif in Targets | 98.1 +/- 59.5bp |
Average Position of motif in Background | 99.8 +/- 59.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.43 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RVE1(MYBrelated)/col-RVE1-DAP-Seq(GSE60143)/Homer
Match Rank: | 1 |
Score: | 0.92 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATT- AGATATTT |
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AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer
Match Rank: | 2 |
Score: | 0.92 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GATATT--- NWWGATATTTNW |
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LHY1(MYBrelated)/col-LHY1-DAP-Seq(GSE60143)/Homer
Match Rank: | 3 |
Score: | 0.92 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATT- AGATATTT |
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EPR1(MYBrelated)/colamp-EPR1-DAP-Seq(GSE60143)/Homer
Match Rank: | 4 |
Score: | 0.91 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATT- AGATATTT |
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At4g01280(MYBrelated)/colamp-At4g01280-DAP-Seq(GSE60143)/Homer
Match Rank: | 5 |
Score: | 0.90 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATT- AGATATTT |
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At5g52660(MYBrelated)/colamp-At5g52660-DAP-Seq(GSE60143)/Homer
Match Rank: | 6 |
Score: | 0.90 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GATATT---- WAGATATTTTTD |
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LHY(Myb)/Seedling-LHY-ChIP-Seq(GSE52175)/Homer
Match Rank: | 7 |
Score: | 0.89 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATT--- AGATATTTHT |
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AT3G10113/MA1191.1/Jaspar
Match Rank: | 8 |
Score: | 0.89 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GATATT------ TNAGATATTTTNNNN |
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RVE1/MA1184.1/Jaspar
Match Rank: | 9 |
Score: | 0.88 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GATATT----- TNAGATATTTTNNN |
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CCA1/MA0972.1/Jaspar
Match Rank: | 10 |
Score: | 0.88 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATT- AGATATTT |
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