Information for 6-GAAGATGGCACGAC (Motif 9)

A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
Reverse Opposite:
A C T G C G A T A T G C A T C G A G C T A C T G G T A C A T G C C G T A A C G T A G T C A G C T A C G T A G T C
p-value:1e-13
log p-value:-3.080e+01
Information Content per bp:1.896
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.7 +/- 24.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGATGGCACGAC
CAAGATGGCGGC--
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAAGATGGCACGAC--
----NHRTCACGACDN
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAGATGGCACGAC
--VGCTGGCA----
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAGATGGCACGAC
--GGTTGGCAT---
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAGATGGCACGAC
NGTAGGTTGGCATNNN
A C G T A C G T A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAGATGGCACGAC
CAAGATGGCGGC--
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAAGATGGCACGAC
--ARNTGACA----
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

AGL42/MA1201.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAGATGGCACGAC
GATGATG-------
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
C T A G C G T A A C G T A C T G C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAGATGGCACGAC
AAGATGATGTCAT---
A C G T A C G T A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T A C G T A C G T

MATR3(RRM)/Homo_sapiens-RNCMPT00037-PBM/HughesRNA

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAGATGGCACGAC
CAAGATT-------
A C T G C G T A C T G A A C T G C G T A A C G T A T C G A C T G A G T C C T G A A T G C A T C G C G T A A G T C
A G T C C G T A C G T A A C T G C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T