Information for 6-YCVTCACACHRGCC (Motif 10)

A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
Reverse Opposite:
A C T G A C T G T G A C A G T C C T A G A C T G C G A T A C T G C G A T A T C G C G T A A C G T T C A G C T A G
p-value:1e-14
log p-value:-3.441e+01
Information Content per bp:1.736
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets110.9 +/- 43.8bp
Average Position of motif in Background78.5 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

At_0284(RRM)/Arabidopsis_thaliana-RNCMPT00284-PBM/HughesRNA

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACT----
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G A C T A G T C C G T A G T A C C G T A A G T C G A C T A C G T A C G T A C G T A C G T

SUP-12(RRM)/Caenorhabditis_elegans-RNCMPT00179-PBM/HughesRNA

Match Rank:2
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACA----
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G C A T A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T

RBM24(RRM)/Homo_sapiens-RNCMPT00184-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACT----
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G C A T A G T C C G T A A G T C C G T A A G T C C G A T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACCT---
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACCT---
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACCT---
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACCT---
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---TCACACCT---
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

TBX18/MA1565.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
-NTTCACACCTCC-
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C A C G T

Rbm24(RRM)/Tetraodon_nigroviridis-RNCMPT00285-PBM/HughesRNA

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:YCVTCACACHRGCC
---NCACACTC---
A G T C A G T C T G C A A C G T A T G C C G T A A G T C G C T A A G T C G A T C T C A G A C T G G T A C A G T C
A C G T A C G T A C G T G A T C G A T C C G T A A G T C C G T A A G T C C G A T A G T C A C G T A C G T A C G T