Information for 19-AGTCTTTTATTA (Motif 18)

C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A
Reverse Opposite:
G A C T C G T A C G T A G A C T C T G A T G C A C G T A C G T A A C T G G C T A A T G C A G C T
p-value:1e-27
log p-value:-6.402e+01
Information Content per bp:1.763
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif21.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets100.0 +/- 76.2bp
Average Position of motif in Background102.3 +/- 50.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

cad/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AGTCTTTTATTA-
---NTTTTATTAN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T
A C G T A C G T A C G T G A C T G C A T A C G T C G A T C G A T C G T A A C G T C A G T C T G A A T C G

CG12361/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AGTCTTTTATTA-
---NTTTTATTAC
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T
A C G T A C G T A C G T C G A T A C G T C G A T C G A T C G A T C G T A A C G T A C G T C T G A A T G C

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGTCTTTTATTA----
NNANTTTTATTGGNNN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:AGTCTTTTATTA--
----TTTTATTRGN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

cad/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.76
Offset:5
Orientation:reverse strand
Alignment:AGTCTTTTATTA-
-----TTTATTAN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C G A T C G T A A C G T C A G T C T G A A T C G

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGTCTTTTATTA----
TNAATTTTATTACCTN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:AGTCTTTTATTA--
----TTTTATTRGN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

HOXA10/MA0899.1/Jaspar

Match Rank:8
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:AGTCTTTTATTA--
---NTTTTATTACN
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T A C G T
A C G T A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AGTCTTTTATTA-
---NTTTTATGAC
C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGTCTTTTATTA----
NTNAATTTTATTGNATT
A C G T C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T