Information for 2-TGATCA (Motif 5)

A C G T A C T G C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A G T C C G T A
p-value:1e-2
log p-value:-6.201e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif15.79%
Number of Background Sequences with motif2829.3
Percentage of Background Sequences with motif6.07%
Average Position of motif in Targets113.6 +/- 51.1bp
Average Position of motif in Background101.8 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA15(C2C2gata)/col-GATA15-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TGATCA--
TGATCATM
A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T
G A C T A T C G G T C A G A C T A T G C C G T A C G A T G T C A

GATA15/MA1016.1/Jaspar

Match Rank:2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--TGATCA-
TATGATCAG
A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T
A G C T C T G A G A C T T C A G C G T A G C A T A T G C C T G A T C A G

GATA20(C2C2gata)/colamp-GATA20-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-TGATCA---
TNGATCNDNM
A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T
G C A T G A T C T C A G G C T A G A C T A G T C C T A G C G T A C A T G G T C A

PH0016.1_Cux1_1/Jaspar

Match Rank:4
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCA------
TNAGNTGATCAACCGGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

elt-6/MA1439.1/Jaspar

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGATCA-
CTGATAAG
A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T
T A G C G C A T C T A G G C T A G A C T G C T A C G T A T A C G

ZmHOX2a(2)(HD-HOX)/Zea mays/AthaMap

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TGATCA-
TGATCTG
A C G T A C T G C G T A A C G T A G T C C G T A A C G T
C A G T A C T G C G T A A C G T A G T C A C G T A C T G

SNRNP70K(RRM)/Drosophila_melanogaster-RNCMPT00143-PBM/HughesRNA

Match Rank:7
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TGATCA
TCTTGATC-
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A
A C G T A G T C C G A T A C G T A C T G C G T A A C G T A G T C A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGATCA------
TAGTGATCATCATTA
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

ATHB34(ZFHD)/colamp-ATHB34-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGATCA
SYTAATYA
A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A
T A C G A G T C A C G T C T G A C G T A A C G T A G T C C G T A

elt-3/MA0542.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGATCA
TCTTATCA
A C G T A C G T A C G T A C T G C G T A A C G T A G T C C G T A
A G C T A G T C A C G T A C G T C G T A A C G T A G T C C G T A