Information for 5-TCAAAATAAA (Motif 5)

A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C G T A C G T C G A T A G C T A C T G C G T A
p-value:1e-11
log p-value:-2.746e+01
Information Content per bp:1.954
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif5.80%
Number of Background Sequences with motif248.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets50.8 +/- 44.6bp
Average Position of motif in Background102.6 +/- 64.3bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

zen/dmmpmm(Down)/fly

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TCAAAATAAA
ATAAAAATAAA
A C G T A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
G C T A C A G T C G T A C G T A G T C A T G C A C T G A G A C T C G T A T G C A G C T A

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:TCAAAATAAA
--AAAATAA-
A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T T C G A C G T A C G T A G T C A G C A T C G T A C G T A A C G T

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:3
Score:0.78
Offset:3
Orientation:forward strand
Alignment:TCAAAATAAA---
---HAATAAAGNN
A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G C T A C G T A C G A T C G T A G T C A C T G A A T C G C G A T A C G T

zen/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.78
Offset:4
Orientation:forward strand
Alignment:TCAAAATAAA
----AATAAA
A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T A C G T A C G T G T C A C G T A A C G T C G T A C G T A C G T A

ZC3H14(Znf)/Homo_sapiens-RNCMPT00086-PBM/HughesRNA

Match Rank:5
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TCAAAATAAA
---AAACAAA
A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T A C G T C G T A G T C A G T C A G T A C G T C A C G T A G T C A

HuR(?)/HEK293-HuR-CLIP-Seq(GSE87887)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCAAAATAAA-
-CAAACCAAAV
A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T G T A C G T C A C G T A G T C A G T A C G T A C G T C A G C T A T G C A T G A C

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCAAAATAAA---
ATATCAAAACAAAACA
A C G T A C G T A C G T A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TCAAAATAAA
CTAAAAATAA-
A C G T A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCAAAATAAA-----
GTTCAAAAAAAAAATTC
A C G T A C G T A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

HuR(RRM)/Homo_sapiens-RNCMPT00117-PBM/HughesRNA

Match Rank:10
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:TCAAAATAAA
---AAACAAA
A C G T A G T C T C G A C G T A C G T A C G T A A C G T C G T A C G T A C G T A
A C G T A C G T A C G T G T C A C T G A G T C A A G T C G C T A C G T A C G T A