Information for 17-AGTGAATCGTGC (Motif 17)

C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T A G T C C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 51.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLHm5/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGTGAATCGTGC
--TGNCNCGTGC
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C T G C A G T A G T C C A G T A G T C A C T G A C G T A C T G A T G C

Tb_0251(RRM)/Trypanosoma_brucei-RNCMPT00251-PBM/HughesRNA

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTGAATCGTGC
TGTGAAT-----
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
A G C T A C T G A C G T A C T G C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGTGAATCGTGC---
---NHGTCGTGAYDN
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

At5g04390(C2H2)/col200-At5g04390-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTGAATCGTGC
AGTGANDN----
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
C T G A T A C G A C G T C T A G C G T A T C G A C T G A C G A T A C G T A C G T A C G T A C G T

STZ(C2H2)/colamp-STZ-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTGAATCGTGC
AGTGAVND----
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
C T G A A T C G G A C T T C A G C G T A T C G A C G A T C T A G A C G T A C G T A C G T A C G T

E(spl)/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTGAATCGTGC
TGTGCCACGTGC
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
A G C T A C T G A C G T A C T G T A G C A G T C A C G T A G T C A T C G A C G T A C T G A T G C

BAS1(MacIsaac)/Yeast

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTGAATCGTGC
--TGACTCTTNC
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
A C G T A C G T C A G T T C A G C T G A A G T C A G C T A G T C A G C T C A G T A G T C G A T C

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTGAATCGTGC
TGTGACTCATT-
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T

HMRA1/MA0327.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGTGAATCGTGC
-----ATTGTGC
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G A G C T

MATA1(MacIsaac)/Yeast

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGTGAATCGTGC
-----ATTGTGC
C G T A A C T G A C G T A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C T G A G C T