p-value: | 1e-13 |
log p-value: | -3.220e+01 |
Information Content per bp: | 1.624 |
Number of Target Sequences with motif | 489.0 |
Percentage of Target Sequences with motif | 32.51% |
Number of Background Sequences with motif | 11079.1 |
Percentage of Background Sequences with motif | 23.79% |
Average Position of motif in Targets | 81.5 +/- 67.4bp |
Average Position of motif in Background | 99.1 +/- 59.6bp |
Strand Bias (log2 ratio + to - strand density) | -2.5 |
Multiplicity (# of sites on avg that occur together) | 1.28 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SeqBias: polyA-repeat
Match Rank: | 1 |
Score: | 0.85 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA --AAAAAAAAAA-- |
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VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer
Match Rank: | 2 |
Score: | 0.85 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AAAAAAAAAAAAAA --AAAAAAAAAA-- |
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ZNF384/MA1125.1/Jaspar
Match Rank: | 3 |
Score: | 0.79 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA TTTAAAAAAAAA-- |
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PB0182.1_Srf_2/Jaspar
Match Rank: | 4 |
Score: | 0.78 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAAAAAAAAAAAAA- GTTAAAAAAAAAAATTA |
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OBP3/MA1274.1/Jaspar
Match Rank: | 5 |
Score: | 0.78 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAAAAAAAAAAAAA----- AAAAAAAAAANAAAAAGTAAA |
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RLR1?/SacCer-Promoters/Homer
Match Rank: | 6 |
Score: | 0.76 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAAAAAAAAAAAAA -AAAARRGAAAAW- |
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REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer
Match Rank: | 7 |
Score: | 0.74 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA ----AAAAAAAA-- |
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AT1G69570/MA1268.1/Jaspar
Match Rank: | 8 |
Score: | 0.73 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AAAAAAAAAAAAAA------- AAAAAAAAAAAAAAGAAAAAGTGAAAA |
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PB0093.1_Zfp105_1/Jaspar
Match Rank: | 9 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AAAAAAAAAAAAAA- AACAAACAACAAGAG |
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AT3G45610/MA1270.1/Jaspar
Match Rank: | 10 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAAAAAAAAAAAAA----- AAAAAAANNAAAAAGTAAA |
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