Information for 15-TTGAGCTTTAAA (Motif 15)

A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T C G T A C G T A C G T A C T A G A G T C A C G T A G T C C G T A C G T A
p-value:1e-9
log p-value:-2.173e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif25.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets112.0 +/- 45.8bp
Average Position of motif in Background105.8 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGAGCTTTAAA
NNTTGAGGTTNN--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTGAGCTTTAAA
NNTGACCTTTNN-
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A A C G T

TCX2/MA1162.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGAGCTTTAAA-
ATTTGAATTTTAAAT
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
C G T A A C G T A C G T A G C T C T A G C G T A G C T A G C A T C G A T G A C T A C G T C T G A C G T A G C T A G C A T

nhr-6/MA1451.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGAGCTTTAAA
-TGACCTTT---
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
A C G T A C G T A C T G C G T A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGAGCTTTAAA-
NNNNTGACCTTTNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

WRKY50/MA1317.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGAGCTTTAAA
CTTTGACTTTTTT-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
G A T C C A G T C G A T C G A T A C T G C T G A A G T C G A C T G C A T G C A T G A C T C G A T G C A T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGAGCTTTAAA-
-TGACCTTTNCNT
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGAGCTTTAAA-
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

TCF7L1/MA1421.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGAGCTTTAAA
CCTTTGATCTTT---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGAGCTTTAAA
TTGAMCTTTG--
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G A T C G T A C G T A C G T A
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T A C G T