Information for 2-TCATTTTTGT (Motif 2)

A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
Reverse Opposite:
C U G A A U G C C G U A C U G A G U C A C G U A U G C A A C G U U A C G C G U A
p-value:1e-12
log p-value:-2.881e+01
Information Content per bp:1.830
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif8.57%
Number of Background Sequences with motif828.7
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets99.6 +/- 53.8bp
Average Position of motif in Background103.1 +/- 68.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1323 MIMAT0005795 Homo sapiens miR-1323 Targets (miRBase)

Match Rank:1
Score:0.67
Offset:-12
Orientation:forward strand
Alignment:------------TCATTTTTGT
AGAAAATGCCCCTCAGTTTTGA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
C G U A A C U G C G U A C G U A C G U A C G U A A C G U A C U G A G U C A G U C A G U C A G U C A C G U A G U C C G U A A C U G A C G U A C G U A C G U A C G U A C U G C G U A

hsa-miR-3662 MIMAT0018083 Homo sapiens miR-3662 Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-16
Orientation:forward strand
Alignment:----------------TCATTTTTGT
CATCAGTCACTACTCATCATTTTC--
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A G U C C G U A A C G U A G U C C G U A A C U G A C G U A G U C C G U A A G U C A C G U C G U A A G U C A C G U A G U C C G U A A C G U A G U C C G U A A C G U A C G U A C G U A C G U A G U C A C G U A C G U

hsa-miR-548t MIMAT0015009 Homo sapiens miR-548t Targets (miRBase)

Match Rank:3
Score:0.66
Offset:-12
Orientation:forward strand
Alignment:------------TCATTTTTGT
CAAAAACCACGATCACTTTTG-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A G U C C G U A C G U A C G U A C G U A C G U A A G U C A G U C C G U A A G U C A C U G C G U A A C G U A G U C C G U A A G U C A C G U A C G U A C G U A C G U A C U G A C G U

hsa-miR-3613-3p MIMAT0017991 Homo sapiens miR-3613-3p Targets (miRBase)

Match Rank:4
Score:0.65
Offset:-14
Orientation:forward strand
Alignment:--------------TCATTTTTGT
GAAGGGTTGGGCTTTTTTTTTTGT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A C U G C G U A C G U A A C U G A C U G A C U G A C G U A C G U A C U G A C U G A C U G A G U C A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C U G A C G U

hsa-miR-548c-3p MIMAT0003285 Homo sapiens miR-548c-3p Targets (miRBase)

Match Rank:5
Score:0.64
Offset:-13
Orientation:forward strand
Alignment:-------------TCATTTTTGT
GCAAAAGTAATTGAGATTTTTG-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A C G U A A C G U A C G U A C U G C G U A A C U G C G U A A C G U A C G U A C G U A C G U A C G U A C U G A C G U

hsa-miR-3646 MIMAT0018065 Homo sapiens miR-3646 Targets (miRBase)

Match Rank:6
Score:0.63
Offset:-15
Orientation:forward strand
Alignment:---------------TCATTTTTGT
TGGGCTGGGCTCATTTCATTTT---
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A C G U A C U G A C U G A C U G A G U C A C G U A C U G A C U G A C U G A G U C A C G U A G U C C G U A A C G U A C G U A C G U A G U C C G U A A C G U A C G U A C G U A C G U A C G U A C G U A C G U

hsa-miR-548ah MIMAT0018972 Homo sapiens miR-548ah Targets (miRBase)

Match Rank:7
Score:0.63
Offset:-12
Orientation:forward strand
Alignment:------------TCATTTTTGT
CAAACACTGCAATCACTTTT--
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A G U C C G U A C G U A C G U A A G U C C G U A A G U C A C G U A C U G A G U C C G U A C G U A A C G U A G U C C G U A A G U C A C G U A C G U A C G U A C G U A C G U A C G U

hsa-miR-4709-5p MIMAT0019811 Homo sapiens miR-4709-5p Targets (miRBase)

Match Rank:8
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------TCATTTTTGT
TTGGAGAGCAAGTCACTGTTGT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A C G U A C G U A C U G A C U G C G U A A C U G C G U A A C U G A G U C C G U A C G U A A C U G A C G U A G U C C G U A A G U C A C G U A C U G A C G U A C G U A C U G A C G U

hsa-miR-548e MIMAT0005874 Homo sapiens miR-548e Targets (miRBase)

Match Rank:9
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------TCATTTTTGT
TGCAAAAGTAGTCTCAGTTTTT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A C G U A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A A C U G A C G U A G U C A C G U A G U C C G U A A C U G A C G U A C G U A C G U A C G U A C G U A C G U

hsa-miR-548o MIMAT0005919 Homo sapiens miR-548o Targets (miRBase)

Match Rank:10
Score:0.60
Offset:-12
Orientation:forward strand
Alignment:------------TCATTTTTGT
GCAAAAGTAACTGCAGTTTTGG
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A U G C G U C A A C G U A C G U C A G U G A C U A C G U A U C G G A C U
A C U G A G U C C G U A C G U A C G U A C G U A A C U G A C G U C G U A C G U A A G U C A C G U A C U G A G U C C G U A A C U G A C G U A C G U A C G U A C G U A C U G A C U G