Information for 5-ACWMYTTWACATYG (Motif 5)

C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
Reverse Opposite:
A G T C C T G A C G T A A C G T A C T G A C G T G C A T C G T A C G T A C T G A A C T G C G T A A C T G A C G T
p-value:1e-7
log p-value:-1.622e+01
Information Content per bp:1.859
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif5.08%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets117.0 +/- 58.1bp
Average Position of motif in Background117.3 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CG11617/MA0173.1/Jaspar

Match Rank:1
Score:0.76
Offset:5
Orientation:forward strand
Alignment:ACWMYTTWACATYG
-----TTAACAT--
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T

CG11617/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACWMYTTWACATYG
---ATTTAACATA-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T C G A T C G A T C G A T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACWMYTTWACATYG
-BTVATTWGCATA-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACWMYTTWACATYG
-CTCATTTGCATW-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

PF13_0315(RRM)/Plasmodium_falciparum-RNCMPT00200-PBM/HughesRNA

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ACWMYTTWACATYG
------TTACATG-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C G T C T A G A C G T

nub/MA0197.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACWMYTTWACATYG
-CTNATTTGCATA-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T G T A C C A G T G T C A C G T A C G A T A G C T C G A T T C A G G T A C C G T A A C G T C G T A A C G T

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACWMYTTWACATYG
---CAATAACAAA-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T G A T C C G T A C G T A C G A T C G T A C G T A A G T C C G T A A C G T A C G T A C G T

caup/MA0217.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:ACWMYTTWACATYG
------TAACA---
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A C G T A A G T C C G T A A C G T A C G T A C G T

HMRA2/MA0318.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACWMYTTWACATYG
-----ATTACATG-
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G A T C G T A A G T C C G T A A G C T C T A G A C G T

PUM(PUF)/Drosophila_melanogaster-RNCMPT00104-PBM/HughesRNA

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ACWMYTTWACATYG
----ATTTACA---
C G T A A G T C C G A T G T A C A G C T A C G T A C G T C G A T C G T A A G T C C G T A A C G T A G C T A C T G
A C G T A C G T A C G T A C G T G T C A G C A T C A G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T