Information for 19-GAGTACAGAA (Motif 15)

A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
Reverse Opposite:
A C G T A G C T G T A C A C G T A C T G A G C T C G T A A G T C A C G T A G T C
p-value:1e-12
log p-value:-2.975e+01
Information Content per bp:1.901
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif115.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets123.8 +/- 53.0bp
Average Position of motif in Background98.4 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GAGTACAGAA
DVAAGTACAR--
A C G T A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
C A T G T G C A G C T A T C G A A C T G C A G T C G T A T A G C C T G A C T G A A C G T A C G T

ZBTB32/MA1580.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGTACAGAA-
-TGTACAGTAT
A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A A C G T
A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

SPL9(SBP)/colamp-SPL9-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGTACAGAA
AAGTACAV--
A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
G C T A T G C A A C T G A C G T C G T A A G T C C T G A T C G A A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAGTACAGAA---
ARGAGGMCAAAATGW
A C G T A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

AtSPL8(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAGTACAGAA--
AATAAGGTACANANAA
A C G T A C G T A C G T A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A A C G T A C G T
C G T A C G T A C G A T C T G A C G T A C T A G A C T G A C G T C G T A A G T C C T G A C G A T G C T A G C T A G C T A G C T A

SPL8/MA0578.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GAGTACAGAA--
AATAAGGTACANANAA
A C G T A C G T A C G T A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A A C G T A C G T
C G T A C G T A C G A T C T G A C G T A C T A G A C T G A C G T C G T A A G T C C T G A C G A T G C T A G C T A G C T A G C T A

SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGTACAGAA
WDWMMGTACADW-
A C G T A C G T A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
C G A T C G T A G C A T G T A C G T A C A C T G A C G T C G T A A G T C C T G A C G T A C G T A A C G T

CG11360(KH)/Drosophila_melanogaster-RNCMPT00129-PBM/HughesRNA

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGTACAGAA
AGAGTATA---
A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
C G T A A C T G C G T A C T A G C G A T C G T A G C A T C T G A A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGTACAGAA
TGAGTTCA---
A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

SPL9/MA1322.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTACAGAA
NTCCGTACAAN-
A C G T A C G T A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A
C T G A C G A T G T A C T G A C A C T G A C G T C G T A A G T C T C G A C G T A C A G T A C G T