Information for 6-AYATATATAT (Motif 9)

C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T C G T A C A G T C T G A A C G T C T A G A C G T
p-value:1e-1
log p-value:-3.793e+00
Information Content per bp:1.883
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.26%
Number of Background Sequences with motif656.1
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets160.9 +/- 18.6bp
Average Position of motif in Background96.0 +/- 95.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: TA-repeat

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-AYATATATAT
TATATATATA-
A C G T C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A C G A T C G T A A C G T

SPT15/MA0386.1/Jaspar

Match Rank:2
Score:0.83
Offset:-6
Orientation:forward strand
Alignment:------AYATATATAT-----
GACTAGATATATATATTCGAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A G A T C G A C T C G T A T C A G C T G A G C A T C G T A C A G T C G T A C G A T C G T A G C A T C G T A C G A T C G A T T A G C T C A G G C T A C A G T

Cf2/MA0015.1/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AYATATATAT
NTATATATAC
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
T C A G G A C T C T G A A G C T C T G A A C G T T C G A A G C T C T G A A G T C

Cf2/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AYATATATAT
-TATATATAC
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
A C G T A G C T C T G A G A C T C T G A A G C T T C G A A G C T C T G A A G T C

RBMS3(RRM)/Homo_sapiens-RNCMPT00057-PBM/HughesRNA

Match Rank:5
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:AYATATATAT
---TATATAT
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A C G T C G T A A C G T C T G A A C G T

SUP-26(RRM)/Caenorhabditis_elegans-RNCMPT00182-PBM/HughesRNA

Match Rank:6
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:AYATATATAT
---TAAATAT
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A G C T C G T A C G T A C G T A A C G T C G T A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:7
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AYATATATAT---
TCTTTATATATAAATA
A C G T A C G T A C G T C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

SHEP(RRM)/Drosophila_melanogaster-RNCMPT00175-PBM/HughesRNA

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AYATATATAT
---TAAATAT
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G A C T C G T A G C T A C G T A A C G T C G T A C G A T

RBMS3(RRM)/Homo_sapiens-RNCMPT00173-PBM/HughesRNA

Match Rank:9
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AYATATATAT
---TATATAN
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G A C T C G T A A C G T C G T A C G A T C G T A A T C G

MOT2/MA0379.1/Jaspar

Match Rank:10
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:AYATATATAT
-----TATAT
C G T A A G T C C G T A A G C T G T C A G C A T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G A T