Information for 10-CCTGCAAAGA (Motif 10)

A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
Reverse Opposite:
A C G T T A G C C G A T A C G T A C G T C A T G T G A C T G C A T A C G T C A G
p-value:1e-24
log p-value:-5.622e+01
Information Content per bp:1.647
Number of Target Sequences with motif378.0
Percentage of Target Sequences with motif18.82%
Number of Background Sequences with motif5122.1
Percentage of Background Sequences with motif10.99%
Average Position of motif in Targets88.1 +/- 50.7bp
Average Position of motif in Background102.3 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCAAAGA
TNCCTGCA----
A C G T A C G T A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
A G C T A C G T A T G C T G A C A G C T A C T G G A T C T C G A A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCAAAGA--------
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCTGCAAAGA-
NNTGCCAAGNN
A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

RIM101/Literature(Harbison)/Yeast

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTGCAAAGA
--TGCCAAG-
A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T

RIM101(MacIsaac)/Yeast

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTGCAAAGA
--TGCCAAG-
A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCTGCAAAGA
TCCATGCAAA--
A C G T A C G T A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
C A G T G A T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T A C G T

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCTGCAAAGA-
---GCAAACAM
A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A A C G T
A C G T A C G T A C G T C T A G A G T C C G T A G T C A C G T A A G T C C G T A G T A C

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCAAAGA--------
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

br-Z4/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTGCAAAGA
---AGAAACA
A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A T C G C G T A

NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCAAAGA
CACCTGANMA--
A C G T A C G T A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A
G A T C C G T A A G T C A G T C A C G T A C T G T C G A G C T A T G C A C T G A A C G T A C G T