p-value: | 1e-9 |
log p-value: | -2.199e+01 |
Information Content per bp: | 1.887 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.33% |
Number of Background Sequences with motif | 0.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 163.8 +/- 26.9bp |
Average Position of motif in Background | 60.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
At5g66730(C2H2)/colamp-At5g66730-DAP-Seq(GSE60143)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA --MAAAAMGACAAA |
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IDD4(C2H2)/col-IDD4-DAP-Seq(GSE60143)/Homer
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA --VAWAAAGACAAA |
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ARF18/MA1689.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCAAWRCSTACAAA--- ----ACCCGACAAAAAT |
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SPL15(SBP)/colamp-SPL15-DAP-Seq(GSE60143)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCAAWRCSTACAAA --WDWMMGTACADW |
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ID1(C2H2(Zn))/Zea mays/AthaMap
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA ---AAAACGACAAA |
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SPL9/MA1322.1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA ---NTCCGTACAAN |
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JKD(C2H2)/col-JKD-DAP-Seq(GSE60143)/Homer
Match Rank: | 7 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA- ---AAAACGACAAAA |
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SPL13/MA1321.1/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA ---NTCCGTACAAT |
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Tv_0258(RRM)/Trichomonas_vaginalis-RNCMPT00258-PBM/HughesRNA
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA-- ---------ACAAACA |
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BCL6B/MA0731.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCAAWRCSTACAAA--- TGAATTCCTAGAAAGCA |
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