Information for 5-CTGRAGGAGW (Motif 4)

U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
Reverse Opposite:
C G A U A U G C C A G U A G U C A U G C C A G U A G C U A U G C C G U A A U C G
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.591
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif20.26%
Number of Background Sequences with motif4218.5
Percentage of Background Sequences with motif9.15%
Average Position of motif in Targets70.5 +/- 48.1bp
Average Position of motif in Background100.0 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-4279 MIMAT0016909 Homo sapiens miR-4279 Targets (miRBase)

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CTGRAGGAGW-
GAAGCCGGGAGGAGAG
A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A A C G U
A C U G C G U A C G U A A C U G A G U C A G U C A C U G A C U G A C U G C G U A A C U G A C U G C G U A A C U G C G U A A C U G

hsa-miR-4691-5p MIMAT0019781 Homo sapiens miR-4691-5p Targets (miRBase)

Match Rank:2
Score:0.64
Offset:-14
Orientation:forward strand
Alignment:--------------CTGRAGGAGW
CCGCAGCTCATGGCCTGGAGGAC-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A G U C A G U C A C U G A G U C C G U A A C U G A G U C A C G U A G U C C G U A A C G U A C U G A C U G A G U C A G U C A C G U A C U G A C U G C G U A A C U G A C U G C G U A A G U C A C G U

hsa-miR-1281 MIMAT0005939 Homo sapiens miR-1281 Targets (miRBase)

Match Rank:3
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CTGRAGGAGW
GGGAGAGGAGGAGGCGA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A C U G A C U G A C U G C G U A A C U G C G U A A C U G A C U G C G U A A C U G A C U G C G U A A C U G A C U G A G U C A C U G C G U A

hsa-miR-4778-3p MIMAT0019937 Homo sapiens miR-4778-3p Targets (miRBase)

Match Rank:4
Score:0.62
Offset:-12
Orientation:forward strand
Alignment:------------CTGRAGGAGW
TCAACTCTGCAAAGGAAGAAGA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A C G U A G U C C G U A C G U A A G U C A C G U A G U C A C G U A C U G A G U C C G U A C G U A C G U A A C U G A C U G C G U A C G U A A C U G C G U A C G U A A C U G C G U A

hsa-miR-3127-3p MIMAT0019201 Homo sapiens miR-3127-3p Targets (miRBase)

Match Rank:5
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------CTGRAGGAGW
CCAGCAGGCCTGCAGAAGGGGA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A G U C A G U C C G U A A C U G A G U C C G U A A C U G A C U G A G U C A G U C A C G U A C U G A G U C C G U A A C U G C G U A C G U A A C U G A C U G A C U G A C U G C G U A

hsa-miR-138-1* MIMAT0004607 Homo sapiens miR-138-1* Targets (miRBase)

Match Rank:6
Score:0.61
Offset:-12
Orientation:forward strand
Alignment:------------CTGRAGGAGW
GGCCCTGGTGTTGTGAAGTAGC
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A C U G A C U G A G U C A G U C A G U C A C G U A C U G A C U G A C G U A C U G A C G U A C G U A C U G A C G U A C U G C G U A C G U A A C U G A C G U C G U A A C U G A G U C

hsa-miR-1237 MIMAT0005592 Homo sapiens miR-1237 Targets (miRBase)

Match Rank:7
Score:0.60
Offset:-13
Orientation:forward strand
Alignment:-------------CTGRAGGAGW
CTGGGGGACGGAGCAGAAGGA--
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A G U C A C G U A C U G A C U G A C U G A C U G A C U G C G U A A G U C A C U G A C U G C G U A A C U G A G U C C G U A A C U G C G U A C G U A A C U G A C U G C G U A A C G U A C G U

hsa-miR-4268 MIMAT0016896 Homo sapiens miR-4268 Targets (miRBase)

Match Rank:8
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------CTGRAGGAGW-
CACATCCTGAGAGGAGGAGCC
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A A C G U
A G U C C G U A A G U C C G U A A C G U A G U C A G U C A C G U A C U G C G U A A C U G C G U A A C U G A C U G C G U A A C U G A C U G C G U A A C U G A G U C A G U C

hsa-miR-155* MIMAT0004658 Homo sapiens miR-155* Targets (miRBase)

Match Rank:9
Score:0.57
Offset:-13
Orientation:forward strand
Alignment:-------------CTGRAGGAGW
TGTTAATGCTAATATGTAGGAG-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A C G U A C U G A C G U A C G U C G U A C G U A A C G U A C U G A G U C A C G U C G U A C G U A A C G U C G U A A C G U A C U G A C G U C G U A A C U G A C U G C G U A A C U G A C G U

hsa-miR-22* MIMAT0004495 Homo sapiens miR-22* Targets (miRBase)

Match Rank:10
Score:0.56
Offset:-12
Orientation:forward strand
Alignment:------------CTGRAGGAGW
TAAAGCTTGCCACTGAAGAACT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U U A G C G C A U U A C G U C G A G U C A U A C G U C A G G U C A U A C G G C U A
A C G U C G U A C G U A C G U A A C U G A G U C A C G U A C G U A C U G A G U C A G U C C G U A A G U C A C G U A C U G C G U A C G U A A C U G C G U A C G U A A G U C A C G U