Information for 2-MCAYCATCAVHVTG (Motif 3)

T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
Reverse Opposite:
A T G C G C T A A C G T C A T G A G C T G C A T A T C G T G C A C G A T A C T G C T A G G C A T C T A G A C T G
p-value:1e-21
log p-value:-5.016e+01
Information Content per bp:1.587
Number of Target Sequences with motif293.0
Percentage of Target Sequences with motif34.67%
Number of Background Sequences with motif9655.1
Percentage of Background Sequences with motif20.28%
Average Position of motif in Targets102.6 +/- 47.9bp
Average Position of motif in Background98.9 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:MCAYCATCAVHVTG
-CATCATCATC---
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T T A G C G T C A G A C T T A G C G T C A G A C T A G T C G C T A G A C T G A T C A C G T A C G T A C G T

AGL42/MA1201.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:MCAYCATCAVHVTG
-CATCATC------
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T A G T C C G T A A G C T A G T C C G T A A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00116-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:MCAYCATCAVHVTG
--AACATCA-----
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T A C G T C G T A G T C A A G T C C G T A A G C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

BRU-3(RRM)/Drosophila_melanogaster-RNCMPT00122-PBM/HughesRNA

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MCAYCATCAVHVTG
ACACCAC-------
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
G T C A A G T C G T C A G T A C G T A C G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YBX1(CSD)/Homo_sapiens-RNCMPT00083-PBM/HughesRNA

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:MCAYCATCAVHVTG
--AACATCA-----
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T A C G T C G T A G T C A A G T C C G T A G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MCAYCATCAVHVTG
ACTCCATC------
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
C G T A G A T C A C G T A G T C A G T C C G T A C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:MCAYCATCAVHVTG
--ACCAGCA-----
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T A C G T C G T A A G T C A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T

TGA4/MA1335.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--MCAYCATCAVHVTG
TGACGTCATCA-----
A C G T A C G T T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
G A C T A T C G C G T A A G T C T C A G A G C T G T A C G T C A A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

Aef1/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MCAYCATCAVHVTG
-CAACAACA-----
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

HAP3(CCAATHAP3)/col-HAP3-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:MCAYCATCAVHVTG
-WTCCATCA-----
T G A C A G T C C G T A G A T C A G T C G C T A A C G T T A G C C G T A T C G A G T A C T C G A C G A T A T C G
A C G T G C A T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T