Information for 18-CTCTGTTGTG (Motif 16)

G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
Reverse Opposite:
A G T C G T C A A T G C T C G A G T C A G T A C G T C A A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.751e+01
Information Content per bp:1.831
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.16%
Number of Background Sequences with motif336.8
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets90.7 +/- 54.4bp
Average Position of motif in Background93.0 +/- 67.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

UNC-75(RRM)/Caenorhabditis_elegans-RNCMPT00081-PBM/HughesRNA

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CTCTGTTGTG
---TGTTGTG
G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
A C G T A C G T A C G T A C G T C T A G A C G T C G A T A C T G A C G T C T A G

REF6/MA1415.1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTTGTG
TNCTCTGTTTT-
A C G T A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
C G A T T C A G G T A C G A C T T G A C A G C T C T A G A G C T C G A T G A C T G A C T A C G T

Tb_0217(RRM)/Trypanosoma_brucei-RNCMPT00217-PBM/HughesRNA

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CTCTGTTGTG
--CTGTTGT-
G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C T G A G C T A C G T

RAV1(RAV)/colamp-RAV1-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CTCTGTTGTG
TWWTTTCTGTTG--
A C G T A C G T A C G T A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
C A G T C G T A C G T A G C A T G A C T G C A T G T A C A G C T A C T G G A C T A C G T C A T G A C G T A C G T

REF6(Zf)/Arabidopsis-REF6-ChIP-Seq(GSE106942)/Homer

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTCTGTTGTG
TVCTCTGTTT--
A C G T A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
A C G T T G A C A G T C A G C T A G T C A G C T A C T G G A C T A G C T G A C T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTTGTG-----
NNCTTTGTTTTGNTNNN
A C G T A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

RAV1(1)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTTGTG-
NTTCTGTTGCNN
A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G A C G T
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G

RAV1/MA0582.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTTGTG-
NTTCTGTTGCNN
A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G A C G T
G A C T G C A T C G A T G T A C A C G T A C T G A C G T A C G T A C T G A T G C C G A T A C T G

ZNF317/MA1593.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTTGTG-
NNTCTGCTGTNA
A C G T G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G A C G T
C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A

RBP1(RRM)/Drosophila_melanogaster-RNCMPT00058-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTCTGTTGTG
--TCGTTGT-
G T A C A C G T T G A C A C G T A C T G A C G T A G C T A T C G C A G T T C A G
A C G T A C G T A G C T A G T C A C T G A C G T A C G T A C T G C G A T A C G T