Information for 17-AAAAATAACCCA (Motif 16)

C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
p-value:1e-17
log p-value:-4.140e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.7 +/- 6.6bp
Average Position of motif in Background83.8 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HuR(RRM)/Homo_sapiens-RNCMPT00032-PBM/HughesRNA

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AAAAATAACCCA
-AAAATAA----
C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
A C G T T C G A C G T A C G T A G T C A G C A T C G T A C G T A A C G T A C G T A C G T A C G T

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AAAAATAACCCA
CTAAAAATAA----
A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A A C G T A C G T A C G T A C G T

pan/dmmpmm(Down)/fly

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAAAATAACCCA
AAAAACA-----
C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
G T C A G T C A T G C A G T C A G T C A A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAAAATAACCCA
DCYAAAAATAGM---
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

HNRNPC(RRM)/Homo_sapiens-RNCMPT00025-PBM/HughesRNA

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATAACCCA
AAAAAAT------
A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
T G C A C G T A C G T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T

HNRNPCL1(RRM)/Homo_sapiens-RNCMPT00167-PBM/HughesRNA

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATAACCCA
AAAAAAT------
A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
T G C A C G T A C G T A C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATAACCCA
GCTAAAAATAGC---
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATAACCCA
ATGCTAAAAATAGAA--
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

br-Z2/dmmpmm(Down)/fly

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAAATAACCCA
ATTAATA-----
C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A
G C T A G C A T G C A T G T C A T G C A G C A T G C T A A C G T A C G T A C G T A C G T A C G T

NCU02182/MA1434.1/Jaspar

Match Rank:10
Score:0.65
Offset:6
Orientation:forward strand
Alignment:AAAAATAACCCA-
------TACCCAC
C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T A C A G T C A G T C G T C A A G T C