Homer de novo Motif Results (tst.CDS.mia.down.mt//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2008
Total background sequences = 46587
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T 1e-66-1.531e+0217.83%6.46%44.1bp (64.1bp)SD0001.1_at_AC_acceptor/Jaspar(0.954)
More Information | Similar Motifs Found
motif file (matrix)
2 A T G C G C A T A C G T A G T C G A C T A C T G A T G C C G T A C A T G A T C G 1e-58-1.337e+0246.91%29.76%47.2bp (68.4bp)SOK2/MA0385.1/Jaspar(0.727)
More Information | Similar Motifs Found
motif file (matrix)
3 A T C G G C T A C G T A T A C G T G C A T C A G C T A G C G A T G T C A T G A C 1e-41-9.601e+0140.39%26.38%50.0bp (64.7bp)AtSPL8(SBP)/Arabidopsis thaliana/AthaMap(0.660)
More Information | Similar Motifs Found
motif file (matrix)
4 T A C G T G C A A G T C C T G A G C A T A T G C C A T G T A G C A G T C C G T A 1e-39-9.006e+0110.71%3.86%43.6bp (62.3bp)DREB26(AP2EREBP)/col-DREB26-DAP-Seq(GSE60143)/Homer(0.709)
More Information | Similar Motifs Found
motif file (matrix)
5 A T C G T A C G T G C A C T A G C T A G G C T A C A G T A T G C G C A T A C T G 1e-36-8.507e+0136.95%24.13%45.8bp (66.2bp)SF2(RRM)/Drosophila_melanogaster-RNCMPT00066-PBM/HughesRNA(0.752)
More Information | Similar Motifs Found
motif file (matrix)
6 T C A G G C A T G A T C T G C A C G A T A G T C C T A G G T C A C A G T C T A G 1e-31-7.330e+0112.45%5.49%46.5bp (65.2bp)RBP1-LIKE(RRM)/Drosophila_melanogaster-RNCMPT00127-PBM/HughesRNA(0.642)
More Information | Similar Motifs Found
motif file (matrix)
7 C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G 1e-29-6.813e+012.54%0.30%35.2bp (65.3bp)YY2/MA0748.2/Jaspar(0.810)
More Information | Similar Motifs Found
motif file (matrix)
8 C T G A T C A G T A G C A G T C C A G T T A C G G C A T C A T G C T A G G T C A 1e-26-6.097e+014.73%1.25%45.6bp (68.7bp)MET28/MA0332.1/Jaspar(0.733)
More Information | Similar Motifs Found
motif file (matrix)
9 C A T G G A T C G A C T A G T C T C A G G T C A C A G T A C T G G A C T T A G C 1e-24-5.714e+018.67%3.59%50.6bp (65.8bp)XBP1/Literature(Harbison)/Yeast(0.670)
More Information | Similar Motifs Found
motif file (matrix)
10 A G T C A T G C A C G T A C T G G T A C T G C A G T C A G C T A A T C G T C G A 1e-24-5.622e+0118.82%10.99%50.7bp (65.2bp)SOK2/SOK2_BUT14/4-SUT1(Harbison)/Yeast(0.724)
More Information | Similar Motifs Found
motif file (matrix)
11 C T A G A T C G C A G T T A G C G A C T G A C T A T G C G C T A G A C T T A G C 1e-22-5.120e+018.47%3.67%46.3bp (65.5bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.662)
More Information | Similar Motifs Found
motif file (matrix)
12 T A G C G A C T T A C G C A T G G C T A G T A C C T A G C G T A C T A G T G C A 1e-19-4.432e+0111.35%5.98%46.7bp (64.4bp)FXR2(KH)/Homo_sapiens-RNCMPT00020-PBM/HughesRNA(0.724)
More Information | Similar Motifs Found
motif file (matrix)
13 C T G A G T A C T G C A C G T A G T A C C G T A G T A C G T C A G T A C C G T A 1e-17-4.144e+0114.09%8.22%64.4bp (64.4bp)ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA(0.877)
More Information | Similar Motifs Found
motif file (matrix)
14 C T G A G C T A C G A T C G T A C G A T C G A T G T C A C G A T G C A T C G T A 1e-17-3.918e+0128.19%20.22%72.1bp (57.2bp)PHO2/MA0356.1/Jaspar(0.827)
More Information | Similar Motifs Found
motif file (matrix)
15 A C T G G T C A A C T G A C G T C T G A G T A C C G T A C A T G C T G A C G T A 1e-12-2.975e+011.44%0.25%53.0bp (66.8bp)SPL11(SBP)/col100-SPL11-DAP-Seq(GSE60143)/Homer(0.706)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A T C G A C T G A T G C A G T C A G T C A C T G A T G C A C G T C G T A 1e-10-2.483e+010.40%0.01%53.3bp (16.1bp)ROX1(MacIsaac)/Yeast(0.668)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G A G T C 1e-9-2.297e+010.35%0.01%27.7bp (50.4bp)ZBTB6/MA1581.1/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
18 * C T A G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A G T C A C G T 1e-9-2.137e+010.30%0.01%31.2bp (0.0bp)FXR2(KH)/Homo_sapiens-RNCMPT00020-PBM/HughesRNA(0.757)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C A C T G A C G T A C T G A G T C A G C T A C T G C G T A A C G T A G T C 1e-7-1.732e+010.45%0.03%35.6bp (30.6bp)Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer(0.687)
More Information | Similar Motifs Found
motif file (matrix)
20 * C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C 1e-7-1.728e+010.30%0.01%27.9bp (40.2bp)POL013.1_MED-1/Jaspar(0.714)
More Information | Similar Motifs Found
motif file (matrix)