Information for 21-GAGCTGCKCARC (Motif 20)

T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
Reverse Opposite:
A C T G G A C T C G A T A C T G G T A C C A T G A T G C G C T A A C T G A G T C A C G T A G T C
p-value:1e-23
log p-value:-5.329e+01
Information Content per bp:1.723
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.8 +/- 41.2bp
Average Position of motif in Background63.8 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTGCKCARC
NNCAGCTGNN----
A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T A C G T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGCTGCKCARC
CAGCAGCTGCTG---
A C G T A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTGCKCARC
CGCAGCTGCG----
A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGCTGCKCARC
NCAGCTGCTG---
A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGCTGCKCARC
AGCAGCTGCT----
A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGCTGCKCARC
NNACAGCTGC-----
A C G T A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTGCKCARC
HCAGCTGDTN---
A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGCTGCKCARC
NNAGCAGCTGCT----
A C G T A C G T A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGCTGCKCARC
GCACAGCTGTGC---
A C G T A C G T A C G T T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
T C A G T G A C T C G A T G A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGCTGCKCARC
CAGCTGNT----
T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T