Information for 4-WGTTCTTCAGGH (Motif 4)

C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
Reverse Opposite:
C A G T T G A C G T A C C G A T T A C G T G C A C G T A T C A G T G C A C T G A T G A C G C T A
p-value:1e-42
log p-value:-9.732e+01
Information Content per bp:1.611
Number of Target Sequences with motif371.0
Percentage of Target Sequences with motif20.45%
Number of Background Sequences with motif4521.6
Percentage of Background Sequences with motif9.69%
Average Position of motif in Targets90.5 +/- 50.5bp
Average Position of motif in Background99.9 +/- 66.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:WGTTCTTCAGGH
-CTTCTTC----
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
A C G T T A G C A C G T A C G T A T G C A G C T A C G T A G T C A C G T A C G T A C G T A C G T

WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:WGTTCTTCAGGH
TDTTCTCMAGGT
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
G A C T C A G T G C A T C G A T T G A C A C G T A T G C G T A C C T G A A C T G A C T G A G C T

NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:WGTTCTTCAGGH-
---TKNTCAGGTG
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A A C G T
A C G T A C G T A C G T G A C T A C G T C G A T A G C T A G T C C G T A A C T G A C T G C G A T C T A G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------WGTTCTTCAGGH-
TTTTTTTTTTTTTTCAGGTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------WGTTCTTCAGGH-
TTTTTTTTTTTTTTCAGGTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

nub/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:WGTTCTTCAGGH
--TTATGCAAGC
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
A C G T A C G T C G A T A C G T C G T A A C G T T A C G A G T C C G T A C G T A A C T G A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:WGTTCTTCAGGH
---GCTTCC---
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Ot_0263(RRM)/Ostreococcus_tauri-RNCMPT00263-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-WGTTCTTCAGGH
TTGTTCT------
A C G T C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
G A C T A G C T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WGTTCTTCAGGH--
ATTGCCTCAGGCCA
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

Eip74EF/MA0026.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:WGTTCTTCAGGH
----CTTCCGG-
C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A G T C A C T G A C T G A C G T