Information for 17-CACAGCCTCC (Motif 16)

G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A A C T G A T C G A G T C A C G T A T C G C G A T A C T G
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.844
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif4.44%
Number of Background Sequences with motif207.0
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets91.9 +/- 67.8bp
Average Position of motif in Background100.9 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTCC
--CAGCCAC-
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
A C G T A C G T A G T C C G T A A C T G A G T C A G T C C G A T A G T C A C G T

ZNF460/MA1596.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACAGCCTCC----
GCCTCAGCCTCCCGAG
A C G T A C G T G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C A C G T A C G T A C G T A C G T
T C A G A T G C A T G C A G C T A T G C T G C A C T A G A G T C A T G C C A G T A T G C A T G C A G T C T C A G T C G A T C A G

CRZ1/MA0285.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACAGCCTCC
CTAAGCCAC-
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
T G A C G C A T T G C A G T C A A C T G A G T C A G T C G T C A A G T C A C G T

AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTCC
--CAGCCGCC
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
A C G T A C G T G A T C T G C A A C T G A G T C G T A C C T A G A G T C A G T C

ERF2(AP2EREBP)/colamp-ERF2-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTCC
--CAGCCGCC
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
A C G T A C G T A G T C T G C A A C T G A G T C G T A C A C T G A G T C A G T C

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CACAGCCTCC
--YAGCCGCC
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
A C G T A C G T G A T C G T C A A C T G A G T C A G T C A C T G A G T C A G T C

AT5G18450/MA1226.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CACAGCCTCC---
TCCACCGCCTCCNCC
A C G T A C G T G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C A C G T A C G T A C G T
C A G T A G T C G T A C C T G A A G T C A G T C C T A G G A T C G A T C C G A T G A T C G T A C C T G A G A T C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CACAGCCTCC
CACAGN----
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ADR1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CACAGCCTCC-
-----ACCCCN
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G C T A G T C A G T C A C G T

ADR1(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CACAGCCTCC-
-----ACCCCN
G T A C C G T A A T G C G T C A A C T G T A G C A G T C C G A T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G C T A G T C A G T C A C G T