Information for 2-CGTGTTTCTGGA (Motif 2)

A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C T G
p-value:1e-28
log p-value:-6.481e+01
Information Content per bp:1.976
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.1 +/- 52.4bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB26/MA1579.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGTGTTTCTGGA---
NNNNTTTCTGGAGNN
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A A C G T A C G T A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

Hsf/MA1458.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CGTGTTTCTGGA---
---NNTTCTGGAANN
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T G C A T C A G T A T G C A C G T T C A G T A C G G T C A C G T A C G T A G C T A

Tb_0253(RRM)/Trypanosoma_brucei-RNCMPT00253-PBM/HughesRNA

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGTGTTTCTGGA
--TTTTTCT---
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
A C G T A C G T A G C T A G C T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T

br-Z4/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGTGTTTCTGGA
--TCTTTAC---
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
A C G T A C G T A C G T A T C G A C G T A C G T A C G T G T A C A G C T A C G T A C G T A C G T

STE12(MacIsaac)/Yeast

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTGTTTCTGGA
--TGTTTCA---
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
A C G T A C G T G A C T C T A G A G C T A G C T G A C T A G T C T C G A A C G T A C G T A C G T

Tp_0225(RRM)/Thalassiosira_pseudonana-RNCMPT00225-PBM/HughesRNA

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGTGTTTCTGGA
GCGTGTT------
A C G T A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
C T A G A G T C A C T G A G C T A T C G A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

sma-4/MA0925.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGTGTTTCTGGA-
--AGTGTCTGGAC
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A A C G T
A C G T A C G T C G T A T C A G A C G T A C T G C G A T A G T C A C G T C T A G A C T G T C G A A G T C

DIG1/DIG1_YPD/32-STE12(Harbison)/Yeast

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTGTTTCTGGA
--TGTTTCA---
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
A C G T A C G T A G C T A T C G A G C T G A C T C A G T A G T C C G T A A C G T A C G T A C G T

STE12/STE12_Alpha/92-STE12(Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTGTTTCTGGA
--TGTTTCA---
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A
A C G T A C G T G A C T C T A G G A C T A G C T C A G T A G T C C T G A A C G T A C G T A C G T

DIG1(MacIsaac)/Yeast

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTGTTTCTGGA------
--TGTTTCANAANTGTNT
A G T C A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G A G C T G C A T G C A T A T G C G T C A A C G T C T G A C G T A C A G T A G C T C A T G A G C T C A G T A G C T