Information for 1-NCAGGTAAGT (Motif 1)

G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
Reverse Opposite:
G C T A A T G C C G A T A G C T C G T A T G A C G A T C G C A T A C T G C A T G
p-value:1e-66
log p-value:-1.531e+02
Information Content per bp:1.668
Number of Target Sequences with motif358.0
Percentage of Target Sequences with motif17.83%
Number of Background Sequences with motif3009.5
Percentage of Background Sequences with motif6.46%
Average Position of motif in Targets135.9 +/- 44.1bp
Average Position of motif in Background98.2 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NCAGGTAAGT--
-CAGGTAAGTAT
G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:NCAGGTAAGT
VCAGGTRDRY
G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

vfl/MA1462.1/Jaspar

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--NCAGGTAAGT
CTGCAGGTAGGC
A C G T A C G T G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
G T A C G C A T C A T G A G T C C T G A T A C G T C A G G A C T T G C A T C A G T C A G G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:NCAGGTAAGT--
-AAGGCAAGTGT
G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--NCAGGTAAGT
GNMCAGGTGTGC
A C G T A C G T G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-NCAGGTAAGT
CAAAGGTCAAA
A C G T G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

NGA4(ABI3VP1)/col-NGA4-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---NCAGGTAAGT
TKNTCAGGTG---
A C G T A C G T A C G T G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
G A C T A C G T C G A T A G C T A G T C C G T A A C T G A C T G C G A T C T A G A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--NCAGGTAAGT
NNGCAGGTGNN-
A C G T A C G T G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T

MOT3/MA0340.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NCAGGTAAGT
-AAGGCA---
G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
A C G T G A C T C G T A A C T G A C T G A G C T C G T A A C G T A C G T A C G T

MOT3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NCAGGTAAGT
-NAGGCA---
G T A C T G A C C G T A C T A G A C T G G C A T T C G A G C T A T A C G C G A T
A C G T G A C T C G T A A C T G A C T G A G C T C G T A A C G T A C G T A C G T