Information for 2-ATATCA (Motif 6)

C G T A A C G T C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.643e+00
Information Content per bp:1.530
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif27.16%
Number of Background Sequences with motif6436.7
Percentage of Background Sequences with motif12.94%
Average Position of motif in Targets107.3 +/- 60.0bp
Average Position of motif in Background99.1 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Optix/MA0199.1/Jaspar

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:ATATCA
-TATCA
C G T A A C G T C G T A A C G T A G T C C G T A
A C G T A G C T C G T A A C G T A G T C C T G A

So/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-ATATCA---
NGTATCATTN
A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T
T G A C C T A G A C G T G T C A A C G T A G T C G T C A G A C T G C A T G T C A

Optix/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-ATATCA---
NNTATCACTT
A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A G C T C G T A A C G T A G T C C T G A A G T C C G A T C G A T

so/MA0246.1/Jaspar

Match Rank:4
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:ATATCA
GTATCA
C G T A A C G T C G T A A C G T A G T C C G T A
C T A G A C G T G T C A A C G T A G T C G T C A

Optix/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:ATATCA---
-TATCACNT
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T
A C G T G C A T G C T A C A G T G A T C C T G A A T G C C A G T C G A T

elt-6/MA1439.1/Jaspar

Match Rank:6
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-ATATCA-
NTTATCAN
A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T
A T G C G C A T C G A T C T G A C G A T G A T C C G T A A T C G

CCA(Myb)/Arabidopsis-CCA.GFP-ChIP-Seq(GSE70533)/Homer

Match Rank:7
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----ATATCA
AAARATATCT
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C G T A
G T C A C T G A C T G A T C G A C T G A A C G T C G T A A C G T A G T C G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.78
Offset:-7
Orientation:forward strand
Alignment:-------ATATCA----
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

AT3G10113(MYBrelated)/col-AT3G10113-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ATATCA--
WNAAATATCWWN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T
C G T A C T G A C G T A C G T A C G T A A C G T C G T A A C G T A G T C G C A T C G A T C G A T

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----ATATCA-----
ACCCGTATCAAATTT
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T