Information for 9-TCCTCACCAAGA (Motif 9)

C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
Reverse Opposite:
G C A T G A T C A G C T A G C T A C T G A T C G G A C T A C T G G C T A C A T G T A C G C G T A
p-value:1e-33
log p-value:-7.697e+01
Information Content per bp:1.724
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif3.86%
Number of Background Sequences with motif271.5
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets118.5 +/- 40.0bp
Average Position of motif in Background100.3 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AGL55/MA1202.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCTCACCAAGA
---TCACCA---
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
A C G T A C G T A C G T A G C T A G T C C G T A A G T C A G T C C G T A A C G T A C G T A C G T

ASHR1(ND)/col-ASHR1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTCACCAAGA
--NTCACCAN--
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
A C G T A C G T T C A G C G A T G T A C C G T A T A G C G T A C G C T A G A C T A C G T A C G T

HAP2/MA0313.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCCTCACCAAGA
-----ACCAA--
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
A C G T A C G T A C G T A C G T A C G T C T G A G T A C A G T C G T C A C G T A A C G T A C G T

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCCTCACCAAGA
GTCCTAA------
A C G T C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
C T A G A C G T A G T C A G T C A C G T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MATR3(RRM)/Homo_sapiens-RNCMPT00037-PBM/HughesRNA

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TCCTCACCAAGA--
-------CAAGATT
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A C G A T A C G T

ZNF263/MA0528.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCACCAAGA
CCTCCTCCCCNN--
A C G T A C G T C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
T A G C A T G C A C G T T A G C T G A C C A G T T G A C T A G C A T G C G A T C T A G C A G T C A C G T A C G T

Aef1/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCCTCACCAAGA
----CAACAA--
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCTCACCAAGA-----
--TTGACCGAGAATTCC
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

GTS1(MacIsaac)/Yeast

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCCTCACCAAGA
----TACCAA--
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
A C G T A C G T A C G T A C G T C G A T C G T A A G T C A G T C T C G A C T G A A C G T A C G T

RIM101/MA0368.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TCCTCACCAAGA
----CGCCAAG-
C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C C G T A C G T A A C T G A C G T