Information for 8-TTTCCCCTGTGT (Motif 8)

A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C G T C A A C T G A C T G A C T G A C T G C G T A C G T A C G T A
p-value:1e-12
log p-value:-2.932e+01
Information Content per bp:1.966
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif4.17%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.6 +/- 22.3bp
Average Position of motif in Background93.3 +/- 37.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RO3G_00049(RRM)/Rhizopus_oryzae-RNCMPT00205-PBM/HughesRNA

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTTCCCCTGTGT
-TTCCCCT----
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
A C G T C G A T A G C T A G T C A G T C A G T C G T A C A G C T A C G T A C G T A C G T A C G T

NDD1(MacIsaac)/Yeast

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTCCCCTGTGT
TTTCCCCTTT--
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
G A C T A G C T A C G T T A G C A G T C G A T C A G T C G A C T G A C T A G C T A C G T A C G T

Pcbp2(KH)/Danio_rerio-RNCMPT00246-PBM/HughesRNA

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTCCCCTGTGT
NTTTCCC------
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
T G A C G C A T C G A T C G A T G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

REI1/MA0364.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTTCCCCTGTGT
---CCCCTGA--
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A G T C G T A C A G T C A G T C A C G T A C T G C T G A A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCCTGTGT
GAATTCCCCGG---
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G A C G T A C G T A C G T

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTCCCCTGTGT
CTTTCCCT-----
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MSN4/Literature(Harbison)/Yeast

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTCCCCTGTGT
--NCCCCTG---
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PCBP1(KH)/Mus_musculus-RNCMPT00239-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTCCCCTGTGT
CCTTTCCC------
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
A G T C G T A C G A C T C G A T C G A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

MSN4/MA0342.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTTCCCCTGTGT
---CCCCT----
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T G T A C A G T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T

NHP10/MA0344.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTTCCCCTGTGT
--TCCCCGGC--
A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A G C T A G T C A G T C A G T C A G T C A C T G A C T G A G T C A C G T A C G T