Information for 10-TSMWGMAGAWGANS (Motif 13)

C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
Reverse Opposite:
A T C G G T A C C G A T A T G C G C A T A G C T A G T C C G A T C A G T A G T C C G A T C A T G T A G C C G T A
p-value:1e-13
log p-value:-3.046e+01
Information Content per bp:1.573
Number of Target Sequences with motif224.0
Percentage of Target Sequences with motif26.51%
Number of Background Sequences with motif7792.2
Percentage of Background Sequences with motif16.36%
Average Position of motif in Targets92.8 +/- 48.3bp
Average Position of motif in Background100.3 +/- 68.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TSMWGMAGAWGANS
-GATGATGATG---
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T C T A G C T G A C G A T T C A G C T G A C A G T A T C G C T G A C A G T A T C G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TSMWGMAGAWGANS
--CAGCTGNT----
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

SeqBias: GCW-triplet

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TSMWGMAGAWGANS
AGCAGCAGCAGC--
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C C G A T A C T G A G T C A C G T A C G T

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TSMWGMAGAWGANS
----RAAGAMGAMG
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T A C G T C T A G C T G A T G C A C T A G C G T A G T A C C T A G T G C A G T C A T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TSMWGMAGAWGANS
---NGAAGC-----
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

Tb_0230(RRM)/Trypanosoma_brucei-RNCMPT00230-PBM/HughesRNA

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TSMWGMAGAWGANS
---AGAAGGAC---
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G A C T G C T G A T G A C A C G T A C G T A C G T

PABPN1(RRM)/Homo_sapiens-RNCMPT00157-PBM/HughesRNA

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TSMWGMAGAWGANS
------AGAAGAN-
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A T C A G C G T A A G T C A C G T

REF2(RRM)/Drosophila_melanogaster-RNCMPT00059-PBM/HughesRNA

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TSMWGMAGAWGANS
---AGAAGGC----
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T C G T A A C T G C G T A C G T A C T A G T C A G G T A C A C G T A C G T A C G T A C G T

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TSMWGMAGAWGANS
----GAAGAAG---
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T A C G T T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T A C G T A C G T

SRSF2(RRM)/Homo_sapiens-RNCMPT00072-PBM/HughesRNA

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TSMWGMAGAWGANS
------AGGAGANG
C G A T A T C G G T A C C G T A C T A G G T C A C G T A C T A G T C G A C G T A A T C G G C T A C A T G T A G C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C T A G C T A G