Information for 5-ATCATCCACAGC (Motif 5)

C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
Reverse Opposite:
C A T G G T A C G A C T C T A G C A G T C T A G C T A G C G T A C G A T A T C G C G T A G C A T
p-value:1e-38
log p-value:-8.840e+01
Information Content per bp:1.742
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif5.51%
Number of Background Sequences with motif498.6
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets88.4 +/- 45.6bp
Average Position of motif in Background103.2 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCCACAGC
NATCATC------
A C G T C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
G C T A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Rbm47(RRM)/Xenopus_tropicalis-RNCMPT00280-PBM/HughesRNA

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCCACAGC
NATCATC------
A C G T C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
C T G A C G T A A C G T A T G C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

RIN(RRM)/Drosophila_melanogaster-RNCMPT00138-PBM/HughesRNA

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCCACAGC
CATCATCT-----
A C G T C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
G A T C C G T A A G C T G T A C C G T A C G A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

G3BP2(RRM)/Homo_sapiens-RNCMPT00021-PBM/HughesRNA

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATCATCCACAGC
-TCATCCT----
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
A C G T G A C T G A T C C G T A A C G T A G T C A G T C C G A T A C G T A C G T A C G T A C G T

MET28/MA0332.1/Jaspar

Match Rank:5
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:ATCATCCACAGC
-----CCACAG-
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T

MET28(MacIsaac)/Yeast

Match Rank:6
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:ATCATCCACAGC
-----CCACAG-
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCATCCACAGC
NTCCTCC-----
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
A C G T A G C T A G T C T G A C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATCATCCACAGC
---ATCCAC---
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00106-PBM/HughesRNA

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCATCCACAGC
NTCCTCC-----
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
A C T G A G C T A G T C T G A C C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

TARDBP(RRM)/Homo_sapiens-RNCMPT00076-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCATCCACAGC
NTCATTCN----
C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C
G A T C G C A T A G T C C G T A A C G T G A C T A G T C G C A T A C G T A C G T A C G T A C G T