p-value: | 1e-21 |
log p-value: | -5.024e+01 |
Information Content per bp: | 1.899 |
Number of Target Sequences with motif | 22.0 |
Percentage of Target Sequences with motif | 1.28% |
Number of Background Sequences with motif | 26.8 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 126.1 +/- 42.0bp |
Average Position of motif in Background | 86.5 +/- 58.7bp |
Strand Bias (log2 ratio + to - strand density) | 1.1 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CTGTCAGAGGAT--- NTGTCAGADNNNNNN |
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GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer
Match Rank: | 2 |
Score: | 0.75 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------CTGTCAGAGGAT NNNNNNNTGTCAGWN--- |
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achi/MA0207.1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGTCAGAGGAT CTGTCA------ |
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Achi/dmmpmm(Noyes_hd)/fly
Match Rank: | 4 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGTCAGAGGAT GCTGTCAAAN--- |
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Hth/dmmpmm(Noyes_hd)/fly
Match Rank: | 5 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGTCAGAGGAT NCTGTCANAG--- |
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hth/MA0227.1/Jaspar
Match Rank: | 6 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGTCAGAGGAT CTGTCA------ |
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vis/MA0252.1/Jaspar
Match Rank: | 7 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGTCAGAGGAT CTGTCA------ |
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MEIS1/MA0498.2/Jaspar
Match Rank: | 8 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGTCAGAGGAT NTGTCAN----- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 9 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTGTCAGAGGAT GCTGTCAA----- |
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HVH21(HD-KNOTTED)/Hordeum vulgare/AthaMap
Match Rank: | 10 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTGTCAGAGGAT ANCTGTCACNNN-- |
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