Information for 23-CATCGGTTTT (Motif 21)

A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A G T A C T A G C T C A G C G T A A C G T C T A G
p-value:1e-6
log p-value:-1.429e+01
Information Content per bp:1.857
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.38%
Number of Background Sequences with motif278.9
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets99.6 +/- 58.6bp
Average Position of motif in Background103.6 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PABPC3(RRM)/Homo_sapiens-RNCMPT00153-PBM/HughesRNA

Match Rank:1
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:CATCGGTTTT-
----GGTTTTC
A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A T G A C G T A C G T A C G T A C G T A G T C

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CATCGGTTTT---
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

MYB70/MA1393.2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CATCGGTTTT
NTAACGGTTAN
A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T
C G T A G C A T C G T A C G T A G A T C C T A G T C A G G A C T G C A T C G T A G C A T

AT1G76870/MA1367.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CATCGGTTTT----
TNCCGGTTTTNNTT
A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A T C C T A G A C T G C A G T G C A T C G A T C G A T C T A G C A G T C G A T C G A T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATCGGTTTT--
ATTATCGATTTTTT
A C G T A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATCGGTTTT---
NDHDDCNGTTDNNNN
A C G T A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T A C G T A C G T A C G T
C G A T C G A T G C A T C G T A C G T A A G T C T C A G A C T G A C G T A C G T C G T A C G T A C G A T C G A T C G A T

prd/dmmpmm(Down)/fly

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CATCGGTTTT
---CAGTTT-
A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T
A C G T A C G T A C G T A G T C T C G A T C A G C G A T C A G T A G C T A C G T

MYB81(MYB)/col-MYB81-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CATCGGTTTT
NNWAWCSGTTWN
A C G T A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T
G A C T C T A G C G A T C G T A C G T A A G T C T A C G A C T G A C G T G C A T C G T A A G T C

ONECUT3/MA0757.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATCGGTTTT--
NTTATTGATTTTTT
A C G T A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

GRHL1/MA0647.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATCGGTTTT
NAAACCGGTTTT
A C G T A C G T A G T C C G T A C G A T A G T C A T C G A C T G A C G T A C G T C G A T A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T