Information for 20-TAARTTCWYTCT (Motif 18)

A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C T A G C G A T A C T G G T C A C G T A A G C T A G C T A C G T C G T A
p-value:1e-20
log p-value:-4.637e+01
Information Content per bp:1.785
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets75.7 +/- 61.5bp
Average Position of motif in Background93.9 +/- 50.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TAARTTCWYTCT-
------CTTTCTN
A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A G C T A G T C A G C T G A C T

abd-A/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAARTTCWYTCT
ATAATT-------
A C G T A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
C G T A A G C T C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Trl/MA0205.2/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAARTTCWYTCT---
---TCTCTCTCTTNN
A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C

EXC-7(RRM)/Caenorhabditis_elegans-RNCMPT00014-PBM/HughesRNA

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAARTTCWYTCT
TTAAGTT------
A C G T A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
A G C T A C G T C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00088-PBM/HughesRNA

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAARTTCWYTCT
-----CCTCTCT
A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G T C A G C T A G T C A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TAARTTCWYTCT---
----TTCTTTCTCTT
A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAARTTCWYTCT
TTAAGTGC-----
A C G T A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T

abd-A/dmmpmm(Down)/fly

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAARTTCWYTCT
ATAAAT-------
A C G T A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
C G T A G C A T G T C A G C T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TAARTTCWYTCT
NNNNTGAATTCANNNC
A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

AT2G38300(G2like)/col-AT2G38300-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAARTTCWYTCT
AACATTCYHT--
A C G T C G T A C T G A C T G A C G A T A C G T G T A C G C T A A G T C C G A T A G T C A C G T
G C T A C G T A G A T C C G T A A C G T A C G T A G T C A G C T G C A T G C A T A C G T A C G T