Information for 10-AAAAAAAAAAAAAA (Motif 14)

C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A
Reverse Opposite:
C G A T C A G T C A G T C G A T C G A T C G A T G C A T C A G T C G A T C G A T G C A T G A C T G C A T G A C T
p-value:1e-13
log p-value:-3.220e+01
Information Content per bp:1.624
Number of Target Sequences with motif489.0
Percentage of Target Sequences with motif32.51%
Number of Background Sequences with motif11079.1
Percentage of Background Sequences with motif23.79%
Average Position of motif in Targets81.5 +/- 67.4bp
Average Position of motif in Background99.1 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-2.5
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: polyA-repeat

Match Rank:1
Score:0.85
Offset:2
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA
--AAAAAAAAAA--
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A
A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T

VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAA
--AAAAAAAAAA--
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A
A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T

ZNF384/MA1125.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA
TTTAAAAAAAAA--
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAA-
GTTAAAAAAAAAAATTA
A C G T A C G T C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

OBP3/MA1274.1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AAAAAAAAAAAAAA-----
AAAAAAAAAANAAAAAGTAAA
A C G T A C G T C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A C T G A C G T A C T G A C T G A C T G A C T G A C T G A C T G A C T G A C G T A C G T A C T G A C T G A T C A G G C A T C G T A C T G A T C G A

RLR1?/SacCer-Promoters/Homer

Match Rank:6
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAA
-AAAARRGAAAAW-
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A
A C G T C T G A C G T A C G T A T C G A C T G A C T G A C T A G C T G A C G T A G T C A C G T A C G A T A C G T

REM19(REM)/colamp-REM19-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.74
Offset:4
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA
----AAAAAAAA--
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A
A C G T A C G T A C G T A C G T G T C A T G C A T G C A G C T A C G T A G C T A G C T A G C T A A C G T A C G T

AT1G69570/MA1268.1/Jaspar

Match Rank:8
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AAAAAAAAAAAAAA-------
AAAAAAAAAAAAAAGAAAAAGTGAAAA
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A C T A G C T G A C G T A C G T A C T G A C T G A A C T G G C A T C T A G G T C A G C T A C G T A C G T A

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAA-
AACAAACAACAAGAG
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

AT3G45610/MA1270.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAA-----
AAAAAAANNAAAAAGTAAA
C T G A C G T A C T G A C G T A G C T A G C T A G T C A C G T A G C T A G C T A G C T A G T C A G T C A G C T A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A C G T A C T G A G C T A C T G A C T G A C T A G A T G C C T G A C G T A C G T A G T C A C G T A A C T G A C G T C G T A C T G A G T C A