Information for 5-ATTAGA (Motif 10)

C G T A A G C T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A C T G A A C G T
p-value:1e-2
log p-value:-4.977e+00
Information Content per bp:1.943
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif27.12%
Number of Background Sequences with motif7067.0
Percentage of Background Sequences with motif14.20%
Average Position of motif in Targets113.0 +/- 63.3bp
Average Position of motif in Background100.1 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

inv/MA0229.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGA
TAATTAGA
A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
A G C T C G T A C G T A A C G T A C G T C G T A C T A G G C T A

Inv/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGA-
NTAATTAGAN
A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T
A G C T A G C T C G T A C G T A A C G T A C G T C G T A C T A G G C T A C T G A

ap/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGA
NNATTA--
A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
A C G T A C G T C G T A A C G T A C G T C G T A A C G T A C G T

inv/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--ATTAGA
TAATTAGA
A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
A G C T C T G A G C T A A C G T A G C T G T C A C T A G G T C A

eve/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--ATTAGA
TCATTAG-
A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
G A C T G T A C C T G A A C G T C G A T C G T A C T A G A C G T

GATA1/MA0035.4/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----ATTAGA-
NNAGATTAGAN
A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATTAGA
GCAATTAG-
A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T

Otp/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGA-
TTAATTAAAN
A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A A C G T
G A C T G A C T T G C A C G T A A C G T A C G T C T G A T C G A C T G A A T C G

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGA
TAAATAG-
A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
G C A T C G T A G C T A C G T A A C G T C G T A C T A G A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATTAGA
ACTAATTAGC
A C G T A C G T A C G T A C G T C G T A A G C T A C G T C G T A A C T G C G T A
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C