Information for 7-ATCATGGCGG (Motif 7)

C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G
Reverse Opposite:
A G T C G T A C C T A G G A T C G A T C T G C A C A G T A T C G C G T A G C A T
p-value:1e-29
log p-value:-6.813e+01
Information Content per bp:1.608
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif2.54%
Number of Background Sequences with motif137.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets68.5 +/- 35.2bp
Average Position of motif in Background108.0 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.2/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:ATCATGGCGG--
-AGATGGCGGCG
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T A C G T
A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

Tv_0259(RRM)/Trichomonas_vaginalis-RNCMPT00259-PBM/HughesRNA

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATCATGGCGG
ACCATGN---
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G
C G T A A G T C A G T C C G T A A C G T A C T G C T G A A C G T A C G T A C G T

RIM101/MA0368.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ATCATGGCGG
--CTTGGCG-
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G
A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C T A G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG-
CAAGATGGCGGC
A C G T C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATCATGGCGG-
CAAGATGGCGGC
A C G T C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

DRE1C/MA0985.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ATCATGGCGG-
---ATGTCGGC
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T
A C G T A C G T A C G T C G T A A C G T A C T G A C G T A G T C A C T G A C T G A G C T

DREB1E/MA0978.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATCATGGCGG-
---ATGTCGGC
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T
A C G T A C G T A C G T C T G A G A C T C T A G G A C T G A T C A C T G C T A G A G T C

DREB1B/MA1669.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATCATGGCGG----
NNNATGTCGGCNNN
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T A C G T A C G T A C G T
C G T A G A C T A C T G C G T A G A C T T C A G C G A T A T G C C A T G T C A G G A T C T C G A C T G A G C T A

brk/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.67
Offset:4
Orientation:forward strand
Alignment:ATCATGGCGG-
----TGGCGCT
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A G C T

pho/MA1460.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATCATGGCGG--
-AAATGGCCGCC
C G T A G C A T T A G C G T C A A C G T C T A G C T A G G A T C C A T G T C A G A C G T A C G T
A C G T G T C A C T G A T G C A A G C T A T C G A C T G G T A C A T G C C T A G G T A C A G T C