Information for 7-AASCGAATGA (Motif 5)

C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A
Reverse Opposite:
A C G U A G U C C G U A A C G U C G A U A G U C A C U G A U G C A C G U A G C U
p-value:1e-10
log p-value:-2.339e+01
Information Content per bp:1.906
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif25.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets54.4 +/- 56.1bp
Average Position of motif in Background63.7 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

hsa-miR-1298 MIMAT0005800 Homo sapiens miR-1298 Targets (miRBase)

Match Rank:1
Score:0.79
Offset:-11
Orientation:forward strand
Alignment:-----------AASCGAATGA-
TACATCTGGACAGCCGAATGAA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U
A C G U C G U A A G U C C G U A A C G U A G U C A C G U A C U G A C U G C G U A A G U C C G U A A C U G A G U C A G U C A C U G C G U A C G U A A C G U A C U G C G U A C G U A

hsa-miR-579 MIMAT0003244 Homo sapiens miR-579 Targets (miRBase)

Match Rank:2
Score:0.66
Offset:-12
Orientation:forward strand
Alignment:------------AASCGAATGA-
AATCGCGGTTTATACCAAATGAA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U
C G U A C G U A A C G U A G U C A C U G A G U C A C U G A C U G A C G U A C G U A C G U C G U A A C G U C G U A A G U C A G U C C G U A C G U A C G U A A C G U A C U G C G U A C G U A

hsa-miR-668 MIMAT0003881 Homo sapiens miR-668 Targets (miRBase)

Match Rank:3
Score:0.57
Offset:-11
Orientation:forward strand
Alignment:-----------AASCGAATGA--
GTAGTGGGCCGAGCCGAGTGACA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U A C G U
A C U G A C G U C G U A A C U G A C G U A C U G A C U G A C U G A G U C A G U C A C U G C G U A A C U G A G U C A G U C A C U G C G U A A C U G A C G U A C U G C G U A A G U C C G U A

hsa-miR-3938 MIMAT0018353 Homo sapiens miR-3938 Targets (miRBase)

Match Rank:4
Score:0.55
Offset:-13
Orientation:forward strand
Alignment:-------------AASCGAATGA
CCGGGTTATCTACAAGGGAATT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A
A G U C A G U C A C U G A C U G A C U G A C G U A C G U C G U A A C G U A G U C A C G U C G U A A G U C C G U A C G U A A C U G A C U G A C U G C G U A C G U A A C G U A C G U A C G U

hsa-miR-130b* MIMAT0004680 Homo sapiens miR-130b* Targets (miRBase)

Match Rank:5
Score:0.55
Offset:-9
Orientation:forward strand
Alignment:---------AASCGAATGA--
GTAGTGCAACAGGGAAAGAGT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U A C G U
A C U G A C G U C G U A A C U G A C G U A C U G A G U C C G U A C G U A A G U C C G U A A C U G A C U G A C U G C G U A C G U A C G U A A C U G C G U A A C U G A C G U

hsa-miR-543 MIMAT0004954 Homo sapiens miR-543 Targets (miRBase)

Match Rank:6
Score:0.54
Offset:-10
Orientation:forward strand
Alignment:----------AASCGAATGA--
AAGAAGTGCACCGCGAATGTTT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U A C G U
C G U A C G U A A C U G C G U A C G U A A C U G A C G U A C U G A G U C C G U A A G U C A G U C A C U G A G U C A C U G C G U A C G U A A C G U A C U G A C G U A C G U A C G U

hsa-miR-1179 MIMAT0005824 Homo sapiens miR-1179 Targets (miRBase)

Match Rank:7
Score:0.54
Offset:-9
Orientation:forward strand
Alignment:---------AASCGAATGA--
CCAACCAATGAAAGAATGCTT
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U A C G U
A G U C A G U C C G U A C G U A A G U C A G U C C G U A C G U A A C G U A C U G C G U A C G U A C G U A A C U G C G U A C G U A A C G U A C U G A G U C A C G U A C G U

hsa-miR-4790-5p MIMAT0019961 Homo sapiens miR-4790-5p Targets (miRBase)

Match Rank:8
Score:0.52
Offset:-13
Orientation:forward strand
Alignment:-------------AASCGAATGA
AACATGAATGGTAAAGCGAT---
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A
C G U A C G U A A G U C C G U A A C G U A C U G C G U A C G U A A C G U A C U G A C U G A C G U C G U A C G U A C G U A A C U G A G U C A C U G C G U A A C G U A C G U A C G U A C G U

hsa-miR-4778-5p MIMAT0019936 Homo sapiens miR-4778-5p Targets (miRBase)

Match Rank:9
Score:0.51
Offset:-13
Orientation:forward strand
Alignment:-------------AASCGAATGA
CCTCTTCTTCCTTTACAGAATT-
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A
A G U C A G U C A C G U A G U C A C G U A C G U A G U C A C G U A C G U A G U C A G U C A C G U A C G U A C G U C G U A A G U C C G U A A C U G C G U A C G U A A C G U A C G U A C G U

hsa-miR-375 MIMAT0000728 Homo sapiens miR-375 Targets (miRBase)

Match Rank:10
Score:0.51
Offset:-11
Orientation:forward strand
Alignment:-----------AASCGAATGA-
TCACGCGAGCCGAACGAACAAA
A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U A C G U C U G A C G U A A U C G A G U C A C U G C G U A C G U A A C G U A C U G C G U A A C G U
A C G U A G U C C G U A A G U C A C U G A G U C A C U G C G U A A C U G A G U C A G U C A C U G C G U A C G U A A G U C A C U G C G U A C G U A A G U C C G U A C G U A C G U A