p-value: | 1e-27 |
log p-value: | -6.325e+01 |
Information Content per bp: | 1.857 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 2.83% |
Number of Background Sequences with motif | 3.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.2 +/- 46.2bp |
Average Position of motif in Background | 81.3 +/- 25.3bp |
Strand Bias (log2 ratio + to - strand density) | 2.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rbm24(RRM)/Tetraodon_nigroviridis-RNCMPT00285-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.73 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GACAGGCGTGTG- -----GAGTGTGN |
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Rbm38(RRM)/Danio_rerio-RNCMPT00283-PBM/HughesRNA
Match Rank: | 2 |
Score: | 0.72 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GACAGGCGTGTG -----GTGTGTG |
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RBM38(RRM)/Mus_musculus-RNCMPT00051-PBM/HughesRNA
Match Rank: | 3 |
Score: | 0.70 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GACAGGCGTGTG -----GTGTGTG |
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CG33714(RRM)/Drosophila_melanogaster-RNCMPT00009-PBM/HughesRNA
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GACAGGCGTGTG ---NGGCGTG-- |
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Tp_0225(RRM)/Thalassiosira_pseudonana-RNCMPT00225-PBM/HughesRNA
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GACAGGCGTGTG -----GCGTGTT |
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SUP-12(RRM)/Caenorhabditis_elegans-RNCMPT00179-PBM/HughesRNA
Match Rank: | 6 |
Score: | 0.69 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GACAGGCGTGTG- ------TGTGTGA |
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Ptf1a(var.3)/MA1620.1/Jaspar
Match Rank: | 7 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GACAGGCGTGTG NNACAGGTGTNN- |
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Rbpjl/MA1621.1/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GACAGGCGTGTG NNNACAGGTGTNNN |
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FAR1/MA1382.1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GACAGGCGTGTG---- -NNAGGCGCGTGANNN |
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RBM24(RRM)/Homo_sapiens-RNCMPT00184-PBM/HughesRNA
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GACAGGCGTGTG- ------AGTGTGA |
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