Information for 18-TTTTATTTCTGG (Motif 18)

A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G C G T A C G T A C G T A A C G T C G T A C G T A C G T A C G T A
p-value:1e-10
log p-value:-2.441e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.33%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.8 +/- 14.3bp
Average Position of motif in Background63.8 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD9/MA0913.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCTGG
NTTTTATTGC---
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCTGG
NTTTTATTGCNN-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCTGG
NTTTTATGAC---
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTATTTCTGG---
TTCTATTTTTAGNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCTGG
NTTTTATTACN--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

KHDRBS1(KH)/Homo_sapiens-RNCMPT00169-PBM/HughesRNA

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCTGG
CTTTTAT------
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
A G T C A C G T C G A T A C G T C G A T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

zen/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTTTATTTCTGG
-TTTATT-----
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C G T C G A T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTTTATTTCTGG-
-KCTATTTTTRGH
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

CDX4/MA1473.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATTTCTGG
GTTTTATTGCC--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T A C G T

croc/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTTATTTCTGG
TTTTAT------
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T