Information for 5-CTACCA (Motif 9)

A G T C A C G T C G T A A G T C A T G C C G T A
Reverse Opposite:
A C G T A T C G A C T G A C G T C G T A A C T G
p-value:1e-2
log p-value:-5.482e+00
Information Content per bp:1.971
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif13.58%
Number of Background Sequences with motif2686.5
Percentage of Background Sequences with motif5.40%
Average Position of motif in Targets91.1 +/- 59.0bp
Average Position of motif in Background98.1 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

schlank/MA0193.1/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:CTACCA-
CTACCAA
A G T C A C G T C G T A A G T C A T G C C G T A A C G T
A G T C A G C T G T C A G T A C A G T C C T G A C T G A

GTS1(MacIsaac)/Yeast

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CTACCA-
-TACCAA
A G T C A C G T C G T A A G T C A T G C C G T A A C G T
A C G T C G A T C G T A A G T C A G T C T C G A C T G A

FZF1/MA0298.1/Jaspar

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTACCA
CTATCA
A G T C A C G T C G T A A G T C A T G C C G T A
A G T C A C G T C G T A A C G T A G T C C G T A

P(MYB)/Zea mays/AthaMap

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTACCA-
ACCTACCCG
A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A A C G T
C G T A A G T C A G T C C G A T C G T A A G T C G A T C G T A C A T C G

HRB87F(RRM)/Drosophila_melanogaster-RNCMPT00029-PBM/HughesRNA

Match Rank:5
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CTACCA
CCCTACC-
A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A
A G T C A G T C A G T C C G A T C G T A G T A C A G T C A C G T

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00095-PBM/HughesRNA

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CTACCA
CCCTACC-
A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A
A G T C A G T C A G T C C G A T C G T A G T A C A G T C A C G T

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00094-PBM/HughesRNA

Match Rank:7
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CTACCA
CCCTACC-
A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A
G T A C A G T C A G T C C G A T C G T A G T A C A G T C A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CTACCA-----
ACATGCTACCTAATAC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

HRB98DE(RRM)/Drosophila_melanogaster-RNCMPT00096-PBM/HughesRNA

Match Rank:9
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CTACCA
CCCTACC-
A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A
A G T C A G T C A G T C C G A T C G T A G T A C A G T C A C G T

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CTACCA
ATCTACT-
A C G T A C G T A G T C A C G T C G T A A G T C A T G C C G T A
C G T A G A C T A G T C A C G T C G T A A G T C C G A T A C G T