Information for 2-RTKTCMGKKMGTTR (Motif 2)

C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
Reverse Opposite:
A G C T C G T A C G T A G T A C C A G T G T C A G T C A G T A C A C G T A C T G C G T A T G A C C G T A A G T C
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.789
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif9.92%
Number of Background Sequences with motif331.4
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets76.8 +/- 55.0bp
Average Position of motif in Background95.6 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YRM1/MA0438.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RTKTCMGKKMGTTR
ATTTCCGT------
C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
C G T A C G A T A G C T A C G T A G T C A G T C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

GRF9(GRF)/colamp-GRF9-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------RTKTCMGKKMGTTR
NNNNNNNTGTCAGWN-----
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
C G T A G C A T C G A T C G T A G T C A G C T A C G A T A C G T A C T G A C G T A G T C C G T A A C T G C G A T C T A G A C G T A C G T A C G T A C G T A C G T

CELF2(RRM)/JSL1-CELF2-CLIP-Seq(GSE71264)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RTKTCMGKKMGTTR
RGTGTCAG-------
A C G T C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
C T G A A C T G A C G T A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YKL222C/MA0428.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RTKTCMGKKMGTTR
ATTTCCGTT-----
C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
C G T A C G A T A G C T A G C T A G T C A G T C A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

AtGRF6(GRF)/col-AtGRF6-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RTKTCMGKKMGTTR-
NTGTCAGADNNNNNN
C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A A C G T
C A T G A G C T A C T G A C G T A G T C C G T A A C T G C G T A C T G A C G T A G C T A C G T A C G A T G C A T C G T A

MYB56(MYB)/colamp-MYB56-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:RTKTCMGKKMGTTR-
-----RDKYCGTTAD
C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G C A T G G A T C T G A C A C T G C A G T G A C T T C G A C A T G

GAMYB(MYB)/Hordeum vulgare/AthaMap

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:RTKTCMGKKMGTTR
------GGCGGTTG
C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T A G T C A T C G A C T G A C G T A C G T C T A G

ETV2/MA0762.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RTKTCMGKKMGTTR
TATTTCCGGTT----
A C G T C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T A C G T A C G T A C G T A C G T

FMR1(KH)/Drosophila_melanogaster-RNCMPT00015-PBM/HughesRNA

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RTKTCMGKKMGTTR
-TGTCCNT------
C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
A C G T A G C T C T A G A C G T G T A C G T A C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RTKTCMGKKMGTTR
NRYTTCCGGY-----
A C G T C T A G A C G T A C G T A C G T A G T C G T C A A C T G A C G T A C G T G T A C A C T G A C G T C G A T C T G A
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T