p-value: | 1e-12 |
log p-value: | -2.832e+01 |
Information Content per bp: | 1.828 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 0.73% |
Number of Background Sequences with motif | 12.8 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 100.4 +/- 48.5bp |
Average Position of motif in Background | 100.3 +/- 52.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
LIN28A(CSD,Znf)/Homo_sapiens-RNCMPT00036-PBM/HughesRNA
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AGATCTTCTCCACA -----TTCTCCN-- |
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KUA1/MA1398.2/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGATCTTCTCCACA --ATCTTATCCAA- |
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AT5G56840(MYBrelated)/colamp-AT5G56840-DAP-Seq(GSE60143)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGATCTTCTCCACA --ACCTTATCCA-- |
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NFATC2/MA0152.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | AGATCTTCTCCACA -----TTTTCCA-- |
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At5g47390(MYBrelated)/col-At5g47390-DAP-Seq(GSE60143)/Homer
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGATCTTCTCCACA ----CTTATCCA-- |
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AT5G61620(MYBrelated)/colamp-AT5G61620-DAP-Seq(GSE60143)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGATCTTCTCCACA ----CTTATCCA-- |
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AT5G61620/MA1189.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGATCTTCTCCACA-- -AATCTTATCCAAATN |
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At3g09600(MYBrelated)/colamp-At3g09600-DAP-Seq(GSE60143)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AGATCTTCTCCACA AAGATATTTT----- |
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At1g19000/MA1400.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGATCTTCTCCACA- -AACCTTATCCATTT |
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AT5G56840/MA1195.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGATCTTCTCCACA-- -AACCTTATCCATAAA |
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