Information for 7-TTGTGTTTGTCAGG (Motif 11)

C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
Reverse Opposite:
A G T C A G T C A G C T A C T G G C T A T A G C T C G A G T C A G T C A A G T C C G T A T A G C C G T A G T C A
p-value:1e-14
log p-value:-3.437e+01
Information Content per bp:1.771
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif108.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets56.6 +/- 41.1bp
Average Position of motif in Background109.6 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BRUNOL4(RRM)/Homo_sapiens-RNCMPT00004-PBM/HughesRNA

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGTGTTTGTCAGG
-TGTGTGT------
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BRUNOL5(RRM)/Homo_sapiens-RNCMPT00166-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGTGTTTGTCAGG
-TGTGTGT------
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGTGTTTGTCAGG
-TGTGTGT------
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C T G C G A T C T A G A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00091-PBM/HughesRNA

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGTTTGTCAGG
NTTGTGT--------
A C G T C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A G C T A G C T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tv_0258(RRM)/Trichomonas_vaginalis-RNCMPT00258-PBM/HughesRNA

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGTGTTTGTCAGG
---TGTTTGT----
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C G T A C G T A C T G A C G T A G C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTGTGTTTGTCAGG
-TGTGTGT------
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IGF2BP3(KH,RRM)/Homo_sapiens-RNCMPT00172-PBM/HughesRNA

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGTGTTTGTCAGG
-TGTNTGT------
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C T G C G A T C G A T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SM(RRM)/Drosophila_melanogaster-RNCMPT00069-PBM/HughesRNA

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGTGTTTGTCAGG
-TGTGTGT------
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C T G A G C T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTGTGTTTGTCAGG
--KTGTTTGC----
C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T C A T G A C G T C T A G A C G T C A G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T

ETR-1(RRM)/Caenorhabditis_elegans-RNCMPT00183-PBM/HughesRNA

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGTGTTTGTCAGG
TTTGTGT--------
A C G T C A G T A C G T A T C G A C G T T A C G A C G T A C G T A C G T A C T G C G A T G T A C C T G A C T A G T A C G
A C G T A C G T A C G T C A T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T