Information for 8-ACGTAGGA (Motif 17)

T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A
Reverse Opposite:
C G A T G A T C A G T C A C G T T G C A G A T C C A T G A C G T
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.601
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif16.74%
Number of Background Sequences with motif3410.4
Percentage of Background Sequences with motif7.55%
Average Position of motif in Targets108.1 +/- 55.6bp
Average Position of motif in Background99.7 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRP54(RRM)/Drosophila_melanogaster-RNCMPT00272-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACGTAGGA-
--GTAGGTA
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A A C G T
A C G T A C G T A C T G A C G T C T G A A C T G A C T G C A G T T C G A

MSI(RRM)/Drosophila_melanogaster-RNCMPT00100-PBM/HughesRNA

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACGTAGGA
-AGTAGGG
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A
A C G T C G T A A C T G A C G T C G T A A C T G C A T G C T A G

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ACGTAGGA-
--TTAGGAC
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A A C G T
A C G T A C G T C G A T A G C T C G T A A C T G A C T G C G T A G A T C

SRSF1(RRM)/Homo_sapiens-RNCMPT00107-PBM/HughesRNA

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ACGTAGGA-
--GGAGGAN
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A A C G T
A C G T A C G T A C T G C T A G C G T A A C T G A C T G C T G A T G C A

Gmeb1/MA0615.1/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ACGTAGGA---
GAGTGTACGTAAGATGG
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------ACGTAGGA---
GAGTGTACGTAAGATGG
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

SRSF1(RRM)/Homo_sapiens-RNCMPT00106-PBM/HughesRNA

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ACGTAGGA-
--GGAGGAN
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A A C G T
A C G T A C G T A C T G C T A G C G T A A C T G A C T G C T G A T G A C

MSI(RRM)/Drosophila_melanogaster-RNCMPT00099-PBM/HughesRNA

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACGTAGGA
-AGTAGGT
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A
A C G T C G T A A C T G A C G T C G T A A C T G C A T G C G A T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00040-PBM/HughesRNA

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACGTAGGA
-AGTAGTT
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A
A C G T C G T A A C T G A C G T C G T A A C T G C A G T C G A T

An_0287(RRM)/Aspergillus_nidulans-RNCMPT00287-PBM/HughesRNA

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACGTAGGA
-CGTAGTA
T G C A G T A C C T A G A C G T T G C A T C A G C T A G G C T A
A C G T G T A C C A T G A C G T C G T A A C T G C G A T C G T A