Information for 20-CACACACAGAAG (Motif 20)

A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
Reverse Opposite:
A T G C A C G T A G C T A G T C C G A T A C T G A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif7.25%
Number of Background Sequences with motif33.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets109.4 +/- 32.0bp
Average Position of motif in Background106.3 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbm38(RRM)/Danio_rerio-RNCMPT00283-PBM/HughesRNA

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CACACACAGAAG
CACACAC-----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
G A T C G T C A G T A C C G T A A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T

RBM38(RRM)/Mus_musculus-RNCMPT00051-PBM/HughesRNA

Match Rank:2
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CACACACAGAAG
CACACAC-----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
G T A C T G C A A G T C G T C A A G T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00114-PBM/HughesRNA

Match Rank:3
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CACACACAGAAG
AACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
G T C A G T C A G T A C C G T A G T A C G T C A G T A C C G T A A C G T A C G T A C G T A C G T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CACACACAGAAG
-ACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
A C G T G T C A G T A C C G T A G T A C C G T A G T A C G T C A A C G T A C G T A C G T A C G T

SeqBias: CA-repeat

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CACACACAGAAG
CACACACACA--
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
G T A C G T C A G T A C G T C A G T A C G T C A G T A C G T C A G T A C G T C A A C G T A C G T

SM(RRM)/Drosophila_melanogaster-RNCMPT00069-PBM/HughesRNA

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CACACACAGAAG
-ACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
A C G T C G T A A T G C C G T A A G T C C T G A T G A C T G C A A C G T A C G T A C G T A C G T

BRUNOL5(RRM)/Homo_sapiens-RNCMPT00166-PBM/HughesRNA

Match Rank:7
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CACACACAGAAG
-ACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
A C G T G T C A G T A C G T C A G T A C C G T A G T A C C G T A A C G T A C G T A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00003-PBM/HughesRNA

Match Rank:8
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CACACACAGAAG
-ACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
A C G T G T C A G T A C C G T A G T A C G T C A G T A C C G T A A C G T A C G T A C G T A C G T

ARET(RRM)/Drosophila_melanogaster-RNCMPT00270-PBM/HughesRNA

Match Rank:9
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CACACACAGAAG
-ACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
A C G T C G T A G T A C C G T A G A T C C G T A G T A C C G T A A C G T A C G T A C G T A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:10
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CACACACAGAAG
-ACACACA----
A G T C C G T A A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A C G T A A T C G
A C G T G T C A G T A C C G T A G A T C C G T A G T A C G T C A A C G T A C G T A C G T A C G T