Homer de novo Motif Results (miaOnly.CDS.down//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1812
Total background sequences = 58000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G A T A C T G A C T G A C G T A C T G A C T G A C T G A T G C A C G T A G T C C G T A A C G T 1e-48-1.106e+021.27%0.01%38.6bp (27.6bp)ARALYDRAFT_484486/MA1098.1/Jaspar(0.717)
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motif file (matrix)
2 C G T A A C T G A C T G A C T G C G A T C G T A A C T G A C T G C G T A A G T C A C T G A C T G 1e-43-1.012e+021.05%0.00%29.9bp (15.9bp)PCBP2(KH)/Homo_sapiens-RNCMPT00044-PBM/HughesRNA(0.673)
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motif file (matrix)
3 C T G A A C G T A G T C A G T C C G T A A C T G C G T A A G T C A C T G A C T G C G T A T C A G 1e-43-9.931e+011.38%0.01%44.5bp (40.0bp)Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer(0.689)
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motif file (matrix)
4 C G A T A C T G G A C T A C G T A G T C G C A T A C G T A T G C G C T A C A T G A C T G G T C A 1e-42-9.732e+0120.45%9.69%50.5bp (66.4bp)TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA(0.707)
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motif file (matrix)
5 C G T A A C G T A T G C G C T A A C G T A G T C A G T C G T C A A G T C C T G A A C T G G T A C 1e-38-8.840e+015.51%1.07%45.6bp (66.3bp)RBM47(RRM)/Gallus_gallus-RNCMPT00279-PBM/HughesRNA(0.730)
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motif file (matrix)
6 A C T G T A G C A G T C G T C A T C G A A T G C C G T A A C T G A T C G A C G T A C T G C G A T 1e-35-8.274e+010.88%0.00%13.5bp (10.9bp)SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer(0.829)
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motif file (matrix)
7 A G T C A C T G C G A T A G T C G T A C A G T C C G T A A G T C A C G T A C T G A C T G G T C A 1e-34-8.008e+011.16%0.01%52.7bp (29.2bp)BHLH112/MA0961.1/Jaspar(0.657)
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motif file (matrix)
8 C T A G G C A T A C T G A C T G C G A T A T C G G C A T C A G T C A T G T G C A G C T A A C G T 1e-33-7.708e+010.94%0.01%63.7bp (26.3bp)Hand1::Tcf3/MA0092.1/Jaspar(0.662)
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motif file (matrix)
9 C G A T A T G C G T A C C G A T T G A C C T G A T A G C T G A C T C G A C T G A C T A G C G T A 1e-33-7.697e+013.86%0.58%40.0bp (57.5bp)AGL55/MA1202.1/Jaspar(0.659)
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motif file (matrix)
10 C G T A C G A T A C T G A C G T A C G T G C A T A G T C A G C T A G T C C G T A A C G T A C T G 1e-32-7.539e+011.10%0.01%54.5bp (45.7bp)INO4/INO4_YPD/4-INO4,37-INO2(Harbison)/Yeast(0.660)
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motif file (matrix)
11 T C A G G T C A A T C G A C T G A C T G G T A C C G T A C A G T T G A C C T A G T A G C A G T C 1e-31-7.242e+011.76%0.08%54.0bp (44.1bp)TOD6/MA0350.1/Jaspar(0.689)
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motif file (matrix)
12 C T A G A T C G G T A C C G T A G T C A C G T A A G T C G C T A G T C A A C T G A C G T C G T A 1e-30-7.108e+011.60%0.06%70.0bp (46.9bp)PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer(0.697)
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motif file (matrix)
13 G T A C G T A C A C T G A T C G A C T G A C G T G C A T A G T C C G T A C G A T A C T G A T C G 1e-30-7.074e+010.77%0.00%48.1bp (35.2bp)usp/MA0016.1/Jaspar(0.681)
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motif file (matrix)
14 T A G C G C A T A T C G T G A C C G A T A T C G T A C G G C A T A C T G A T G C G C A T A T C G 1e-30-6.999e+0126.19%15.58%46.3bp (66.1bp)SeqBias: GCW-triplet(0.740)
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motif file (matrix)
15 A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C T G 1e-28-6.635e+010.83%0.00%35.4bp (23.9bp)dof24(C2C2dof)/col-dof24-DAP-Seq(GSE60143)/Homer(0.717)
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motif file (matrix)
16 A G T C A C G T C G A T A C T G C G T A A C G T A C T G A C G T A G T C C T A G A G T C A C G T 1e-28-6.537e+010.94%0.01%68.0bp (32.1bp)CTCF/MA0531.1/Jaspar(0.688)
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motif file (matrix)
17 C G T A C T G A A C T G C G T A A C G T A C T G A C T G A G T C C T G A A T C G A G T C A G T C 1e-28-6.537e+010.94%0.01%40.0bp (67.4bp)YY1(Zf)/Promoter/Homer(0.844)
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motif file (matrix)
18 C T G A T A C G C G A T T G A C C G A T A C G T A C G T A G C T C T G A C G A T G A C T C G T A 1e-27-6.402e+011.38%0.05%76.2bp (50.6bp)cad/dmmpmm(Noyes_hd)/fly(0.784)
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motif file (matrix)
19 C G T A A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T 1e-23-5.329e+010.61%0.00%87.8bp (0.0bp)PH0152.1_Pou6f1_2/Jaspar(0.703)
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motif file (matrix)
20 T C A G C G T A T C A G A G T C C G A T T A C G G T A C C A T G T G A C G C T A C T G A A G T C 1e-23-5.329e+010.61%0.00%41.2bp (10.8bp)BHLHE22(var.2)/MA1635.1/Jaspar(0.662)
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motif file (matrix)
21 A C G T A C G T A C G T A T C G A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C 1e-22-5.182e+010.88%0.02%80.1bp (55.7bp)At4g31060(AP2EREBP)/colamp-At4g31060-DAP-Seq(GSE60143)/Homer(0.686)
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motif file (matrix)
22 T G C A C T A G A G T C A C G T A G T C C G A T A T G C A G C T A G T C A C G T C T G A A G T C 1e-22-5.144e+010.77%0.01%51.2bp (57.6bp)Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer(0.661)
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motif file (matrix)
23 A C G T A C G T A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T 1e-17-4.074e+010.55%0.01%51.8bp (43.5bp)Aef1/dmmpmm(Bergman)/fly(0.707)
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motif file (matrix)
24 A C G T A T C G T A G C G A T C G A T C G T A C A C G T A C T G C G A T C G T A A T C G C A G T 1e-15-3.588e+010.50%0.01%56.7bp (5.5bp)USV1/MA0413.1/Jaspar(0.664)
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motif file (matrix)