Information for 23-TGTCTTCCAGAT (Motif 23)

A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T G T A C A C G T A C T G A C T G C G T A C G T A A C T G C G T A A G T C C G T A
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.935
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.8 +/- 56.2bp
Average Position of motif in Background95.4 +/- 71.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR1/MA0304.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TGTCTTCCAGAT
-GGCTTCCA---
A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
A C G T T C A G C A T G T G A C C G A T A C G T A T G C A T G C G C T A A C G T A C G T A C G T

ARF1(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTCTTCCAGAT
CTTGTCTCCCA---
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
A G T C C G A T A C G T A C T G A C G T A G T C A C G T G T A C G T A C G T A C T C G A A C G T A C G T A C G T

HSF1/MA0319.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TGTCTTCCAGAT
--TGTTCCAT--
A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
A C G T A C G T G A C T T A C G A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTCTTCCAGAT
TGTCTGDCACCT
A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

ARF10/MA1685.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTTCCAGAT-
NGTGTCTCCCNTTNG
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T A C G T
T A G C C A T G A G C T A T C G A G C T A G T C A G C T A T G C G A T C A G T C C T G A A G C T A C G T C T G A A C T G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGTCTTCCAGAT
CTGTCTGTCACCT
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGTCTTCCAGAT
--TTTTCCA---
A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T

GCR1(MacIsaac)/Yeast

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTCTTCCAGAT
GGGCTTCCA---
A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
A T C G A C T G C T A G G T A C G C A T A C G T A G T C A G T C G C T A A C G T A C G T A C G T

GCR2/MA0305.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGTCTTCCAGAT
--GCTTCCT---
A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T
A C G T A C G T T A C G A G T C C G A T A C G T A G T C A T G C G C A T A C G T A C G T A C G T

SFL1/MA0377.1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTTCCAGAT----
TNTTATTTCTTCTATNNNNNA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T G C A T G C A T G A C T C G T A C A G T C G A T A G C T T G A C A G C T C G A T A G T C A C G T C T G A G A C T C A G T G A T C C A G T A G T C C A G T C G T A