Information for 4-AGTCGC (Motif 8)

C G T A A C T G A C G T A G T C A C T G A T G C
Reverse Opposite:
A T C G A G T C A C T G C G T A A G T C A C G T
p-value:1e-2
log p-value:-6.355e+00
Information Content per bp:1.941
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif15.70%
Number of Background Sequences with motif3567.8
Percentage of Background Sequences with motif7.51%
Average Position of motif in Targets98.7 +/- 54.5bp
Average Position of motif in Background100.0 +/- 71.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CBF4(AP2EREBP)/colamp-CBF4-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------AGTCGC--
NNNNNNWHGTCGGYN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T
C G T A G C T A C G T A C G T A G A C T C G A T C G T A G A C T A C T G A C G T A G T C A C T G C T A G A G T C T C G A

CBF3(AP2EREBP)/colamp-CBF3-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AGTCGC---
NNATGTCGGYNR
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T A C G T
A G C T C A G T C G T A G C A T C A T G G C A T A G T C A C T G C T A G G A T C T C G A C T A G

CBF2(AP2EREBP)/colamp-CBF2-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------AGTCGC---
NNNNNATGTCGGYVR
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T A C G T
G C T A C T G A C G T A G C T A C A T G C G T A C G A T A C T G A G C T A G T C A C T G C T A G G A C T T C A G C T G A

CBF1(AP2EREBP)/colamp-CBF1-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AGTCGC--
NATGTCGGYR
A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T
A C G T C G T A C G A T T A C G G A C T G A T C T C A G C T A G G A T C T C G A

DREB1A/MA0971.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGTCGC---
ATGTCGGCAA
A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T A C G T
C G T A G A C T C T A G G A C T T G A C A C T G C T A G A G T C T C G A T C A G

AT1G77200(AP2EREBP)/colamp-AT1G77200-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGTCGC-
HWDTGTCGGT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T
G C T A C G A T C G A T G A C T C T A G C G A T G A T C C A T G T C A G G A C T

PB0179.1_Sp100_2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGTCGC-------
TCCGTCGCTTAAAAG
A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

CBF1/MA1224.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGTCGC----
NATGTCGGCGAN
A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T A C G T A C G T
A C T G C G T A G A C T A C T G C G A T A G T C A C T G C T A G G A T C T C A G C T G A G T C A

At4g16750(AP2EREBP)/col-At4g16750-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGTCGC--
TDTGTCGGTD
A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T
G C A T C G A T G A C T C T A G C G A T A G T C C T A G C A T G G A C T C T A G

DEAR3(AP2EREBP)/colamp-DEAR3-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AGTCGC---
NNNNNWTGTCGGTGV
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A T G C A C G T A C G T A C G T
G C A T C G A T C G T A G C A T C G T A C G A T C A G T A C T G C G A T A G T C A C T G A C T G A G C T A C T G T C A G