Information for 14-CTCACGTCCT (Motif 14)

A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G C G T A A T G C A C T G C G A T A C T G C G T A T C A G
p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.806
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif5.46%
Number of Background Sequences with motif331.6
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets103.0 +/- 49.7bp
Average Position of motif in Background92.2 +/- 67.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--CTCACGTCCT--
NNCTCACCTCCTNN
A C G T A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

SPIB/MA0081.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTCACGTCCT-----
TTTCACTTCCTCTTTT
A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T A G C T A T G C C G T A A T G C G C A T A C G T G A T C G A T C A G C T A G T C G C A T G A C T G A C T A G C T

hkb/MA0450.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTCACGTCCT
-TCACGCCCC
A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T
A C G T C A G T G T A C G T C A A G T C A C T G A G T C A G T C A G T C G T A C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTCACGTCCT-
AAGGTCATGACCTT
A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTCACGTCCT-
GAGGTCATGACCTC
A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

hkb/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCACGTCCT-
CNTCACGCCCCC
A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T
T G A C G T A C C G A T T A G C G T C A G T A C T A C G G T A C A G T C G A T C G T A C A G T C

SPI1/MA0080.5/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTCACGTCCT-------
NNTTTCACTTCCTCTTTTNN
A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G A C T G A C T G A C T A G C T A T G C G C T A A G T C G C A T A G C T G A T C G A T C G A C T A G T C G C A T G A C T G A C T G A C T G A C T G A C T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTCACGTCCT-
AAGGTCATGACCTT
A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTCACGTCCT-
GAGGTCATGACCTC
A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C

ELF1/MA0473.3/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTCACGTCCT----
NNCACTTCCTGNNN
A G T C A C G T A G T C C G T A G T A C T A C G C G A T A G T C A G T C A G C T A C G T A C G T A C G T A C G T
A T G C A G T C A G T C G C T A A G T C G C A T A C G T G A T C T A G C A C G T A T C G A C G T G A C T G A C T