Information for 5-CTGGAC (Motif 18)

A T G C A G C T A C T G A C T G C T G A A T G C
Reverse Opposite:
T A C G A G C T A G T C A G T C T C G A A T C G
p-value:1e-10
log p-value:-2.528e+01
Information Content per bp:1.819
Number of Target Sequences with motif467.0
Percentage of Target Sequences with motif55.27%
Number of Background Sequences with motif20826.8
Percentage of Background Sequences with motif43.72%
Average Position of motif in Targets99.6 +/- 47.4bp
Average Position of motif in Background99.9 +/- 67.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB26/MA1579.1/Jaspar

Match Rank:1
Score:0.81
Offset:-7
Orientation:reverse strand
Alignment:-------CTGGAC--
NNNNTTTCTGGAGNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C T G A C T G C T G A A T G C A C G T A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

RBM6(RRM)/Homo_sapiens-RNCMPT00170-PBM/HughesRNA

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CTGGAC-
CTGGATT
A T G C A G C T A C T G A C T G C T G A A T G C A C G T
A G T C A C G T A C T G A C T G C G T A C G A T C A G T

SAMD4A(SAM)/Homo_sapiens-RNCMPT00063-PBM/HughesRNA

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CTGGAC
GCTGGNC
A C G T A T G C A G C T A C T G A C T G C T G A A T G C
A C T G A G T C C A G T A C T G A C T G G T C A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGGAC
GTGGAT
A T G C A G C T A C T G A C T G C T G A A T G C
A T C G A C G T A C T G A C T G C G T A A C G T

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00082-PBM/HughesRNA

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CTGGAC
NGCTGGCC
A C G T A C G T A T G C A G C T A C T G A C T G C T G A A T G C
A G C T A C T G A G T C C G A T A C T G A C T G G A T C A T G C

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTGGAC-
GATGGAGT
A C G T A T G C A G C T A C T G A C T G C T G A A T G C A C G T
A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTGGAC-
WDNCTGGGCA
A C G T A C G T A C G T A T G C A G C T A C T G A C T G C T G A A T G C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Vts1p(SAM)/Saccharomyces_cerevisiae-RNCMPT00111-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTGGAC
NGCTGGCC
A C G T A C G T A T G C A G C T A C T G A C T G C T G A A T G C
A G C T A C T G A G T C C A G T A C T G A C T G G T A C A T G C

WIP5(C2H2)/colamp-WIP5-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTGGAC----
ACCTKGAGAAHA
A C G T A C G T A T G C A G C T A C T G A C T G C T G A A T G C A C G T A C G T A C G T A C G T
T C G A T G A C A G T C A G C T C A T G A T C G C G T A A C T G G C T A C G T A G T C A C T G A

ttk/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGGAC-
CAGGACC
A T G C A G C T A C T G A C T G C T G A A T G C A C G T
G T A C C T G A A C T G A C T G C G T A A G T C G T A C