Information for 1-HCWKCATSWTCHTC (Motif 4)

G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
Reverse Opposite:
T C A G C T G A C T G A T C A G T C G A C G T A T A C G G T C A C A G T A T C G G T C A C G A T A T C G C G T A
p-value:1e-28
log p-value:-6.668e+01
Information Content per bp:1.440
Number of Target Sequences with motif618.0
Percentage of Target Sequences with motif41.09%
Number of Background Sequences with motif12841.0
Percentage of Background Sequences with motif27.57%
Average Position of motif in Targets104.4 +/- 48.8bp
Average Position of motif in Background99.9 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZML2(C2C2gata)/col-ZML2-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:HCWKCATSWTCHTC
-CATCATCATC---
G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
A C G T T A G C G T C A G A C T T A G C G T C A G A C T A G T C G C T A G A C T G A T C A C G T A C G T A C G T

AGL42/MA1201.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:HCWKCATSWTCHTC
-CATCATC------
G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
A C G T A G T C C G T A A G C T A G T C C G T A A C G T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

skn-1/MA0547.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----HCWKCATSWTCHTC
AATTGTCATCATTTT----
A C G T A C G T A C G T A C G T A C G T G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
G C T A G C T A C G A T G C A T C T A G A C G T A G T C C G T A C A G T A T G C C T G A G C A T G A C T G A C T A G C T A C G T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--HCWKCATSWTCHTC
GVACAGNMTGTYCTB-
A C G T A C G T G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

MAFF/MA0495.3/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---HCWKCATSWTCHTC
AAGTCAGCATTTTTTT-
A C G T A C G T A C G T G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
C T G A C G T A T A C G C G A T G T A C C G T A C A T G A G T C C G T A C G A T G C A T G C A T G C A T G C A T G C A T G C A T A C G T

MAFG/MA0659.2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---HCWKCATSWTCHTC
GAGTCAGCATTTTTT--
A C G T A C G T A C G T G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
C T A G C G T A T A C G C G A T G T A C C G T A A C T G G A T C C G T A C G A T G C A T G C A T G A C T G A C T G C A T A C G T A C G T

SWI5/Literature(Harbison)/Yeast

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:HCWKCATSWTCHTC
CCAGCA--------
G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
A G C T A G T C C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:HCWKCATSWTCHTC
-CAGCTGTTTCCT-
G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---HCWKCATSWTCHTC
AGNACAGNCTGTTCTN-
A C G T A C G T A C G T G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--HCWKCATSWTCHTC
GAACADWATGTTCTT-
A C G T A C G T G C A T T A G C G C T A C A G T T A G C G T C A C A G T A T G C G C A T A G C T A G T C G A C T G A C T A G T C
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T