Information for 6-TTGGCTTTCT (Motif 7)

A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
Reverse Opposite:
C T G A A C T G G T C A G T C A C T G A C A T G A G T C G T A C G C T A C G T A
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.827
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif6.23%
Number of Background Sequences with motif594.8
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets85.0 +/- 58.3bp
Average Position of motif in Background96.5 +/- 63.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0220(RRM)/Trypanosoma_brucei-RNCMPT00220-PBM/HughesRNA

Match Rank:1
Score:0.76
Offset:4
Orientation:forward strand
Alignment:TTGGCTTTCT-
----CTTTCTN
A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T A C G T
A C G T A C G T A C G T A C G T A G T C A G C T A C G T A G C T A G T C A G C T G A C T

tll/MA0459.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTTTCT
TTTGACTTTT-
A C G T A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
C A G T G A C T A C G T A C T G C T G A A G T C A C G T A C G T A G C T C G A T A C G T

WRKY50/MA1317.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTGGCTTTCT-
CTTTGACTTTTTT
A C G T A C G T A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T A C G T
G A T C C A G T C G A T C G A T A C T G C T G A A G T C G A C T G C A T G C A T G A C T C G A T G C A T

WRKY8(WRKY)/colamp-WRKY8-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTGGCTTTCT
CGTTGACTTT--
A C G T A C G T A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
G A T C C A T G A C G T A C G T A C T G C G T A A G T C A G C T C G A T G A C T A C G T A C G T

Dof2/MA0020.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTGGCTTTCT
--NGCTTT--
A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
A C G T A C G T C A G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T

WRKY17/MA1299.1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTTTCT
NNCGTTGACTTTTT
A C G T A C G T A C G T A C G T A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
C T A G A C T G G A T C A C T G A C G T A G C T A C T G T C G A A G T C G A C T G A C T A G C T C A G T A C G T

WRKY46/MA1296.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTGGCTTTCT
CGTTGACTTTG-
A C G T A C G T A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
T G A C A C T G A C G T A C G T A C T G C T G A A G T C A G C T A G C T G A C T A C T G A C G T

tll/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTGGCTTTCT--
NNTTTGACTTTTNGT
A C G T A C G T A C G T A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T A C G T A C G T
C A G T C A T G C A G T G A C T A C G T A C T G C T G A A G T C A C G T A C G T A G C T C G A T C G T A A T C G A G C T

MNB1A/MA0053.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TTGGCTTTCT
---GCTTT--
A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
A C G T A C G T A C G T C A T G A G T C A C G T A C G T A C G T A C G T A C G T

PTBP1(RRM)/Homo_sapiens-RNCMPT00269-PBM/HughesRNA

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TTGGCTTTCT
---ACTTTCT
A C G T C G A T A C T G T C A G G T A C A G C T A C G T A C G T T G A C G A C T
A C G T A C G T A C G T G T C A A G T C A C G T C G A T C G A T A G T C A G C T