Information for 25-AGCGGCTCCC (Motif 20)

C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G A G T C A G T C A C T G A G T C A G C T
p-value:1e-7
log p-value:-1.728e+01
Information Content per bp:1.966
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.5 +/- 27.9bp
Average Position of motif in Background111.4 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AGCGGCTCCC
----GCTCCG
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

STP1(MacIsaac)/Yeast

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCGGCTCCC
TGCGGCGC--
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C A C G T A C G T

STP1/MA0394.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCGGCTCCC
TGCGGCGC--
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A G C T C T A G A G T C A C T G C T A G A G T C C A T G A T G C A C G T A C G T

ERF105(AP2EREBP)/colamp-ERF105-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGCGGCTCCC
TGGCGGCT---
A C G T C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
G C A T A C T G C T A G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T

TBS1/MA0404.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGCGGCTCCC
--CGGATCCG
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A G T C A C T G A C T G C G T A A C G T A G T C A G T C A C T G

ERF115(AP2EREBP)/colamp-ERF115-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCTCCC
WTKRCGGCGB--
A C G T A C G T C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
C G T A G C A T C A G T C T A G A G T C A C T G A C T G G T A C A C T G A T C G A C G T A C G T

At2g33710(AP2EREBP)/colamp-At2g33710-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGCGGCTCCC
WTKGCGGCKR--
A C G T A C G T C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
C G T A G C A T C A T G C T A G A G T C A C T G A T C G G T A C A C T G T C A G A C G T A C G T

ERF1(AP2EREBP)/colamp-ERF1-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCGGCTCCC
GGCGGCTR--
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A C T G A C T G A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C G T

AT5G23930(mTERF)/col-AT5G23930-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCGGCTCCC
GGCGGCTG--
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
A C T G C T A G A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C G T

RAP2-3/MA1051.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCGGCTCCC
GGCGGCGC--
C T G A A C T G A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C
C A T G C A T G G T A C A C T G A T C G A G T C C A T G A T G C A C G T A C G T