Information for 11-ACAYAATATAATAT (Motif 15)

C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T
Reverse Opposite:
C G T A A G C T T C G A C G A T C G A T C G T A C G A T G T C A C G A T C G A T T C A G C A G T C T A G G C A T
p-value:1e-13
log p-value:-3.203e+01
Information Content per bp:1.657
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif593.3
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets129.3 +/- 68.1bp
Average Position of motif in Background100.7 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT1G04880(ARID)/colamp-AT1G04880-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ACAYAATATAATAT-
AAACTATATADTATA
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T
G C T A C G T A C G T A A G T C G A C T C G T A A C G T C T G A A C G T C G T A C G A T A C G T C G T A C G A T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACAYAATATAATAT--
TATAATTATAATATTC
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ACAYAATATAATAT--
TAAGATTATAATACGG
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACAYAATATAATAT--
TTTAATTATAATTAAG
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACAYAATATAATAT--
GCTAATTATAATTATC
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

SHEP(RRM)/Drosophila_melanogaster-RNCMPT00174-PBM/HughesRNA

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACAYAATATAATAT
---TAATATA----
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T
A C G T A C G T A C G T G A C T C G T A C G T A G C A T C G T A C G A T C G T A A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAYAATATAATAT
AAGATAAGATAACA-
A C G T C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

NHP6A/MA0345.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACAYAATATAATAT---
ATGACCTATATATAAAAATGA
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T A C G T A C G T
T G C A G C A T C A T G G C T A G T A C G A T C G C A T G T C A G C A T C G T A G C A T C G T A G C A T C G T A C G T A C G T A C G T A C G T A G C A T C T A G G T C A

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACAYAATATAATAT--
AATGCAATAAAATTTAT
A C G T C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

HOXB13/MA0901.2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACAYAATATAATAT
AACCAATAAAATTT
C G T A G A T C G C T A A G T C C G T A G C T A C A G T G C T A C G A T G C T A G C T A A G C T C T G A G C A T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T