Information for 3-AGCAAGAGACCR (Motif 3)

C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
Reverse Opposite:
A G T C A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A T C G A G T C C G A T
p-value:1e-29
log p-value:-6.856e+01
Information Content per bp:1.929
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif3.30%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets118.7 +/- 44.9bp
Average Position of motif in Background113.0 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NAC078/MA1677.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGCAAGAGACCR
AACAAGAAACAT
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
G C T A C T G A A G T C C G T A G T C A A C T G G C T A G C T A C G T A G A T C G T C A C G A T

SRSF10(RRM)/Homo_sapiens-RNCMPT00090-PBM/HughesRNA

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AGCAAGAGACCR
----AGAGAAA-
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C T A G C G T A T G C A T G C A A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00019-PBM/HughesRNA

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AGCAAGAGACCR
----AGAGAAA-
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
A C G T A C G T A C G T A C G T C G T A C T A G C G T A C T A G G T C A T G C A T G C A A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCAAGAGACCR
GGTTAGAGACCT
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Trl/MA0205.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCAAGAGACCR-
-GAAAGAGAGAGA
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G A C G T
A C G T T C A G T C G A T C G A G C T A C A T G C G T A A T C G T G C A C T A G T G C A T C A G T C G A

BPC1(BBRBPC)/colamp-BPC1-DAP-Seq(GSE60143)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGAGACCR
GARGAGAGAGAA--
A C G T A C G T C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
C A T G G C T A C T A G T A C G C G T A T C A G C G T A A C T G C G T A C A T G C T G A C G T A A C G T A C G T

SeqBias: GA-repeat

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCAAGAGACCR
GAGAGAGAGA---
A C G T C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A C T A G C T G A A C G T A C G T A C G T

SRSF10(RRM)/Homo_sapiens-RNCMPT00089-PBM/HughesRNA

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCAAGAGACCR
----AGAGAAA-
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
A C G T A C G T A C G T A C G T C G T A C T A G C G T A C T A G C T G A T C G A T C G A A C G T

Trl/dmmpmm(Down)/fly

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCAAGAGACCR
GAGAGAGAGAGC-
A C G T C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
T C A G T G C A T C A G G T C A C A T G T C G A T C A G G T C A C T A G T G C A C T A G G T A C A C G T

RTG3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGCAAGAGACCR
-----GTGACC-
C G T A A C T G A T G C C G T A C G T A A C T G C G T A A C T G C G T A A G T C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A G T C A C G T