miRDeep2

.

Parameters used


miRDeep2 version2.0.1.2
Program call/usr/local/bin/miRDeep2.pl SED-6_collapsed.fa GRCh38.primary_assembly.genome.fa_clean.fa.fasta SED-6_reads_collapsed_vs_GRCh38.primary_assembly.genome.fa_genome.arf mature.fa_igenome.fa_idx.fa none hairpin.fa_igenome.fa_idx.fa
ReadsSED-6_collapsed.fa
GenomeGRCh38.primary_assembly.genome.fa_clean.fa.fasta
MappingsSED-6_reads_collapsed_vs_GRCh38.primary_assembly.genome.fa_genome.arf
Reference mature miRNAsmature.fa_igenome.fa_idx.fa
Other mature miRNAsnone


Survey of miRDeep2 performance for score cut-offs -10 to 10
novel miRNAsknown miRBase miRNAs
miRDeep2 scorefor details on how the log-odds score is calculated, see Friedlander et al., Nature Biotechnology, 2008. predicted by miRDeep2novel miRNA hairpins are here defined by not having any of the reference mature miRNAs mapping perfectly (full length, no mismatches). The numbers show how many novel miRNA hairpins have a score equal to or exceeding the cut-off. estimated false positivesnumber of false positive miRNA hairpins predicted at this cut-off, as estimated by the miRDeep2 controls (see Friedlander et al., Nature Biotechnology, 2008). Mean and standard deviation is estimated from 100 rounds of permuted controls. estimated true positivesthe number of true positive miRNA hairpins is estimated as t = total novel miRNAs - false positive novel miRNAs. The percentage of the predicted novel miRNAs that is estimated to be true positives is calculated as p = t / total novel miRNAs. The number of false positives is estimated from 100 rounds of permuted controls. In each of the 100 rounds, t and p are calculated, generating mean and standard deviation of t and p. The variable p can be used as an estimation of miRDeep2 positive predictive value at the score cut-off. in speciesnumber of reference mature miRNAs for that species given as input to miRDeep2. in datanumber of reference mature miRNAs for that species that map perfectly (full length, no mismatches) to one or more of precursor candidates that have been excised from the genome by miRDeep2. detected by miRDeep2number of reference mature miRNAs for that species that map perfectly (full length, no mismatches) to one or more of predicted miRNA hairpins that have a score equal to or exceeding the cut-off. The percentage of reference mature miRNAs in data that is detected by miRDeep2 is calculated as s = reference mature miRNAs detected / reference mature miRNAs in data. s can be used as an estimation of miRDeep2 sensitivity at the score cut-off. estimated signal-to-noisefor the given score cut-off, the signal-to-noise ratio is estimated as r = total miRNA hairpins reported / mean estimated false positive miRNA hairpins over 100 rounds of permuted controls. excision gearingthis is the minimum read stack height required for excising a potential miRNA precursor from the genome in this analysis.
1000 ± 00 ± 0 (0 ± 0%)265648557 (12%)53.61
900 ± 00 ± 0 (0 ± 0%)265648557 (12%)51.71
800 ± 00 ± 0 (0 ± 0%)265648557 (12%)501
700 ± 00 ± 0 (0 ± 0%)265648557 (12%)47.61
600 ± 00 ± 0 (0 ± 0%)265648559 (12%)48.41
500 ± 00 ± 0 (0 ± 0%)265648561 (13%)47.81
400 ± 00 ± 0 (0 ± 0%)265648565 (13%)49.31
310 ± 11 ± 0 (79 ± 41%)265648575 (15%)23.71
231 ± 12 ± 1 (69 ± 30%)2656485174 (36%)10.11
145 ± 20 ± 1 (10 ± 18%)2656485215 (44%)61
0518 ± 40 ± 0 (0 ± 0%)2656485228 (47%)31
-11126 ± 50 ± 0 (0 ± 0%)2656485260 (54%)2.71
-22339 ± 60 ± 0 (0 ± 1%)2656485298 (61%)2.41
-35463 ± 80 ± 2 (1 ± 3%)2656485365 (75%)2.31
-480128 ± 90 ± 0 (0 ± 0%)2656485411 (85%)1.71
-594241 ± 110 ± 0 (0 ± 0%)2656485419 (86%)1.11
-6118297 ± 120 ± 0 (0 ± 0%)2656485423 (87%)11
-7184343 ± 120 ± 0 (0 ± 0%)2656485430 (89%)1.11
-8224371 ± 130 ± 0 (0 ± 0%)2656485433 (89%)1.11
-9256391 ± 140 ± 0 (0 ± 0%)2656485434 (89%)1.11
-10284405 ± 140 ± 0 (0 ± 0%)2656485434 (89%)1.11





novel miRNAs predicted by miRDeep2


provisional idthis is a provisional miRNA name assigned by miRDeep2. The first part of the id designates the chromosome or genome contig on which the miRNA gene is located. The second part is a running number that is added to avoid identical ids. The running number is incremented by one for each potential miRNA precursor that is excised from the genome. Clicking this field will display a pdf of the structure, read signature and score breakdown of the reported miRNA. miRDeep2 scorethe log-odds score assigned to the hairpin by miRDeep2 estimated probability that the miRNA candidate is a true positivethe estimated probability that a predicted novel miRNA with a score of this or higher is a true positive. To see exactly how this probability is estimated, mouse over the 'novel miRNAs, true positives' in the table at the top of the webpage. rfam alertthis field indicates if the predicted miRNA hairpin has sequence similarity to reference rRNAs or tRNAs. Warnings in this field should overrule the estimated probability that a reported miRNA is a true positive (previous field). total read countthis is the sum of read counts for the predicted mature, loop and star miRNAs. mature read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted mature miRNA, including 2 nts upstream and 5 nts downstream. loop read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted miRNA loop, including 2 nts upstream and 5 nts downstream. star read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted star miRNA, including 2 nts upstream and 5 nts downstream. significant randfold p-valuethis field indicates if the estimated randfold p-value of the excised potential miRNA hairpin is equal to or lower than 0.05 (see Bonnet et al., Bioinformatics, 2004). miRBase miRNAthis field displays the ids of any reference mature miRNAs for the species that map perfectly (full length, no mismatches) to the reported miRNA hairpin. If this is the case, the reported miRNA hairpin is assigned as a known miRNA. If not, it is assigned as a novel miRNA. If more than one reference mature miRNA maps to the miRNA hairpin, then only the id of the reference miRBase miRNA that matches the predicted mature sequence is output. example miRBase miRNA with the same seedthis field displays the ids of any reference mature miRNAs from related species that have a seed sequence identical to that of the reported mature miRNA. The seed is here defined as nucleotides 2-8 from the 5' end of the mature miRNA. If more than one reference mature miRNA have identical seed, then only the id of the miRNA that occurs last in the input file of reference mature miRNAs from related species is displayed. UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the consensus precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the consensus precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). consensus mature sequencethis is the consensus mature miRNA sequence as inferred from the deep sequencing reads. consensus star sequencethis is the consensus star miRNA sequence as inferred from the deep sequencing reads. consensus precursor sequencethis is the consensus precursor miRNA sequence as inferred from the deep sequencing reads. Note that this is the inferred Drosha hairpin product, and therefore does not include substantial flanking genomic sequence as does most miRBase precursors. precursor coordinateThe given precursor coordinates refer do absolute position in the mapped reference sequence
chr22_3763 3.3 0.79 ± 0.41 18 18 0 0 yes blast gggcggcggcggcggcgg gccgccgcggccguugugc gggcggcggcggcggcgggcggggcgcagccgucgggccgggcgggcgagugcgcgcuugcccgccgccgcggccguugugc chr22:19766117..19766199:-
chr22_3782 2.8 0.69 ± 0.30 37 37 0 0 yes blast uugaggucggacaugguggcu ccaccacgccuggccuaagagu ccaccacgccuggccuaagaguguguuucuuaaagguaaagacuugaggucggacaugguggcu chr22:40956704..40956768:-
chr22_3739 2.1 0.69 ± 0.30 70 70 0 0 yes blast gaugccugggaguugcgaucug ggucgcccucaaggugaccc ggucgcccucaaggugacccgccuacuuugcgggaugccugggaguugcgaucug chr22:42615334..42615389:+
chr17_3141 1.9 0.10 ± 0.18 51 51 0 0 yes blast uuuggggauucuaagaggaag uaacucuuagaauccccaaagc uaacucuuagaauccccaaagcauucugugaagugguuuggggauucuaagaggaag chr17:44266963..44267020:+
chrX_3929 0.7 0.00 ± 0.00 92 92 0 0 yes blast aaagggauuuuuggagcaggga caugcaucaaccugguau aaagggauuuuuggagcagggagauggaauaaggacuaguuuccuccacuccaugcaucaaccugguau chrX:72377008..72377077:-



mature miRBase miRNAs detected by miRDeep2


tag idthis is a tag id assigned by miRDeep2. The first part of the id designates the chromosome or genome contig on which the miRNA gene is located. The second part is a running number that is added to avoid identical ids. The running number is incremented by one for each potential miRNA precursor that is excised from the genome. Clicking this field will display a pdf of the structure, read signature and score breakdown of the miRNA. miRDeep2 scorethe log-odds score assigned to the hairpin by miRDeep2 estimated probability that the miRNA is a true positivethe estimated probability that a predicted miRNA with a score of this or higher is a true positive. To see exactly how this probability is estimated, mouse over the 'novel miRNAs, true positives' in the table at the top of the webpage. For miRBase miRNAs, this reflects the support that the data at hand lends to the miRNA. rfam alertthis field indicates if the miRNA hairpin has sequence similarity to reference rRNAs or tRNAs. Warnings in this field should overrule the estimated probability that a reported miRNA is a true positive (previous field). predicted mature seq. in accordance with miRBase mature seq.If the predicted miRDeep2 sequence overlaps with the miRBase annotated mature sequence than this is indicated by 'TRUE'. If the predicted miRDeep2 star sequence overlaps with the miRBase annotated mature sequence this is inidicated by 'STAR'. total read countthis is the sum of read counts for the mature, loop and star miRNAs. mature read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the consensus mature miRNA, including 2 nts upstream and 5 nts downstream. loop read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the consensus miRNA loop, including 2 nts upstream and 5 nts downstream. star read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the consensus star miRNA, including 2 nts upstream and 5 nts downstream. significant randfold p-valuethis field indicates if the estimated randfold p-value of the miRNA hairpin is equal to or lower than 0.05 (see Bonnet et al., Bioinformatics, 2004). mature miRBase miRNAthis field displays the ids of any reference mature miRNAs for the species that map perfectly (full length, no mismatches) to the reported miRNA hairpin. If this is the case, the reported miRNA hairpin is assigned as a known miRNA. If not, it is assigned as a novel miRNA. If more than one reference mature miRNA maps to the miRNA hairpin, then only the id of the reference miRBase miRNA that matches the predicted mature sequence is output. example miRBase miRNA with the same seedthis field displays the ids of any reference mature miRNAs from related species that have a seed sequence identical to that of the reported mature miRNA. The seed is here defined as nucleotides 2-8 from the 5' end of the mature miRNA. If more than one reference mature miRNA have identical seed, then only the id of the miRNA that occurs last in the input file of reference mature miRNAs from related species is displayed. UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the consensus precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the consensus precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). consensus mature sequencethis is the consensus mature miRNA sequence as inferred from the deep sequencing reads. consensus star sequencethis is the consensus star miRNA sequence as inferred from the deep sequencing reads. consensus precursor sequencethis is the consensus precursor miRNA sequence as inferred from the deep sequencing reads. Note that this is the inferred Drosha hairpin product, and therefore does not include substantial flanking genomic sequence as does most miRBase precursors. precursor coordinateThe given precursor coordinates refer do absolute position in the mapped reference sequence
chr3_786 8.3e+4 0.00 ± 0.00 TRUE 163435 163434 0 1 yes hsa-miR-16-5p blast uagcagcacguaaauauuggcg accaauauuacugugcug uagcagcacguaaauauuggcguagugaaauauauauuaaacaccaauauuacugugcug chr3:160404753..160404813:+
chr12_2518 1.1e+4 0.00 ± 0.00 TRUE 22436 22434 0 2 yes hsa-let-7i-5p blast ugagguaguaguuugugcuguu cugcgcaagcuacugccuug ugagguaguaguuugugcuguuggucggguugugacauugcccgcuguggagauaacugcgcaagcuacugccuug chr12:62603690..62603766:+
chr8_1859 7.7e+3 0.00 ± 0.00 TRUE 15216 15123 0 93 yes hsa-miR-486-5p blast uccuguacugagcugccccgag cggggcagcucaguacagga uccuguacugagcugccccgaggcccuucaugcugcccagcucggggcagcucaguacagga chr8:41660443..41660505:-
chr8_1740 7.7e+3 0.00 ± 0.00 TRUE 15178 15094 0 84 yes hsa-miR-486-5p blast uccuguacugagcugccccgag cggggcagcucaguacagga uccuguacugagcugccccgagcugggcagcaugaagggccucggggcagcucaguacagga chr8:41660443..41660505:+
chr9_2023 5.4e+3 0.00 ± 0.00 STAR 10731 8966 0 1765 yes hsa-miR-126-5p blast cguaccgugaguaauaaugcg cauuauuacuuuugguacgcg cauuauuacuuuugguacgcgcugugacacuucaaacucguaccgugaguaauaaugcg chr9:136670615..136670674:+
chr17_3124 3.1e+3 0.00 ± 0.00 TRUE 6164 6161 0 3 yes hsa-miR-423-5p blast ugaggggcagagagcgagacuuu agcucggucugaggccccuca ugaggggcagagagcgagacuuuucuauuuuccaaaagcucggucugaggccccuca chr17:30117094..30117151:+
chr8_1927 2.5e+3 0.00 ± 0.00 TRUE 4979 4887 0 92 yes hsa-miR-151b blast ucgaggagcucacagucuagu cuagacugaagcuccuugagg ucgaggagcucacagucuaguaugucucauccccuacuagacugaagcuccuugagg chr8:140732586..140732643:-
chr3_847 2.4e+3 0.00 ± 0.00 TRUE 4803 4799 0 4 yes hsa-miR-191-5p blast caacggaaucccaaaagcagcu gcugcgcuuggauuucgucccc caacggaaucccaaaagcagcuguugucuccagagcauuccagcugcgcuuggauuucgucccc chr3:49020630..49020694:-
chr9_1986 1.7e+3 0.00 ± 0.00 TRUE 3460 3456 0 4 yes hsa-let-7d-5p blast agagguaguagguugcauagu cuauacgaccugcugccuuuc agagguaguagguugcauaguuuuagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuuc chr9:94178840..94178915:+
chr1_36 9.1e+2 0.00 ± 0.00 TRUE 1784 1611 0 173 yes hsa-miR-30e-5p blast uguaaacauccuugacuggaagcu cuuucagucggauguuuacagc uguaaacauccuugacuggaagcuguaagguguucagaggagcuuucagucggauguuuacagc chr1:40754370..40754434:+
chr17_3227 1.6e+2 0.00 ± 0.00 TRUE 316 312 0 4 yes hsa-miR-4732-5p blast uguagagcagggagcaggaagcu gcccugaccuguccuguuc uguagagcagggagcaggaagcuguguguguccagcccugaccuguccuguuc chr17:28861669..28861722:-
chrX_3841 1.4e+2 0.00 ± 0.00 TRUE 282 92 0 190 yes hsa-miR-223-5p blast cguguauuugacaagcugaguug ugucaguuugucaaauaccccaa cguguauuugacaagcugaguuggacacuccaugugguagagugucaguuugucaaauaccccaa chrX:66018894..66018959:+
chr13_2668 1.3e+2 0.00 ± 0.00 TRUE 256 250 0 6 yes hsa-miR-20a-5p blast uaaagugcuuauagugcagguag cugcauuaugagcacuuaaagu uaaagugcuuauagugcagguaguguuuaguuaucuacugcauuaugagcacuuaaagu chr13:91351071..91351130:+
chr13_2662 7.9e+1 0.00 ± 0.00 TRUE 154 141 0 13 yes hsa-miR-17-5p blast caaagugcuuacagugcagguag cugcagugaaggcacuugua caaagugcuuacagugcagguagugauaugugcaucuacugcagugaaggcacuugua chr13:91350617..91350675:+
chr7_1676 7.1e+1 0.00 ± 0.00 STAR 144 139 0 5 no hsa-miR-25-5p blast cauugcacuugucucggucuga aggcggagacuugggcaauugcu aggcggagacuugggcaauugcuggacgcugcccugggcauugcacuugucucggucuga chr7:100093570..100093630:-
chr14_2765 7.0e+1 0.00 ± 0.00 STAR 134 119 0 15 yes hsa-miR-342-5p blast ucucacacagaaaucgcacccguc aggggugcuaucugugauugagg aggggugcuaucugugauugagggacaugguuaauggaauugucucacacagaaaucgcacccguc chr14:100109672..100109738:+
chrX_3985 6.1e+1 0.00 ± 0.00 TRUE 117 115 0 2 yes hsa-miR-505-5p blast gggagccaggaaguauugaugu cgucaacacuugcugguu gggagccaggaaguauugauguuucugccaguuuagcgucaacacuugcugguu chrX:139924163..139924217:-
chr11_2435 5.4e+1 0.00 ± 0.00 TRUE 104 92 0 12 yes hsa-miR-139-5p blast ucuacagugcacgugucuccagu uggagacgcggcccuguuggagu ucuacagugcacgugucuccaguguggcucggaggcuggagacgcggcccuguuggagu chr11:72615065..72615124:-
chr6_1501 4.0e+1 0.00 ± 0.00 TRUE 77 50 0 27 yes hsa-miR-30a-5p blast uguaaacauccucgacuggaagcu cuuucagucggauguuugcagc uguaaacauccucgacuggaagcugugaagccacagaugggcuuucagucggauguuugcagc chr6:71403553..71403616:-
chr15_2908 3.9e+1 0.00 ± 0.00 STAR 76 75 0 1 yes hsa-miR-628-5p blast ucuaguaagaguggcagucgaag augcugacauauuuacuagagg augcugacauauuuacuagaggguaaaauuaauaaccuucuaguaagaguggcagucgaag chr15:55372951..55373012:-
chr13_2669 3.9e+1 0.00 ± 0.00 STAR 75 72 0 3 yes hsa-miR-92a-1-5p blast uauugcacuugucccggccugu agguugggaucgguugcaaug agguugggaucgguugcaaugcuguguuucuguaugguauugcacuugucccggccugu chr13:91351323..91351382:+
chr3_813 3.3e+1 0.00 ± 0.00 STAR 63 51 0 12 yes hsa-miR-28-5p blast cacuagauugugagcuccugga ucaaggagcucacagucuauu ucaaggagcucacagucuauugaguuaccuuucugacuuucccacuagauugugagcuccugga chr3:188688791..188688855:+
chrX_3861 2.4e+1 0.00 ± 0.00 STAR 44 41 0 3 yes hsa-miR-652-5p blast aauggcgccacuaggguugugc acaacccuaggagagggugcc acaacccuaggagagggugccauucacauagacuauaauugaauggcgccacuaggguugugc chrX:110055347..110055410:+
chr9_2008 1.9e+1 0.00 ± 0.00 TRUE 36 32 0 4 yes hsa-miR-181a-5p blast aacauucaacgcugucggugagu accacugaccguugacugu aacauucaacgcugucggugaguuugggauuugaaaaaaccacugaccguugacugu chr9:124692479..124692536:+
chrX_3981 1.8e+1 0.00 ± 0.00 TRUE 34 28 0 6 yes hsa-miR-424-5p blast cagcagcaauucauguuuuga caaaacgugaggcgcugcu cagcagcaauucauguuuugaaguguucuaaaugguucaaaacgugaggcgcugcu chrX:134546645..134546701:-
chr17_3138 1.5e+1 0.00 ± 0.00 TRUE 29 27 0 2 yes hsa-miR-5010-5p blast agggggauggcagagcaaaau uuuugugucucccauuccccag agggggauggcagagcaaaauucauggccuacagcugccucuugccaaacugcacuggauuuugugucucccauuccccag chr17:42514207..42514288:+
chr19_3488 1.5e+1 0.00 ± 0.00 STAR 27 25 0 2 yes hsa-miR-199a-5p blast acaguagucugcacauugguu cccaguguucagacuaccuguuc cccaguguucagacuaccuguucaggaggcucucaauguguacaguagucugcacauugguu chr19:10817429..10817491:-
chr1_296 1.5e+1 0.00 ± 0.00 STAR 27 25 0 2 yes hsa-miR-199a-5p blast acaguagucugcacauugguu cccaguguucagacuaccuguuc cccaguguucagacuaccuguucaggacaaugccguuguacaguagucugcacauugguu chr1:172144554..172144614:-
chr9_2100 1.4e+1 0.00 ± 0.00 STAR 26 25 0 1 yes hsa-miR-199b-5p blast acaguagucugcacauugguu cccaguguuuagacuaucuguuca cccaguguuuagacuaucuguucaggacucccaaauuguacaguagucugcacauugguu chr9:128244745..128244805:-
chr16_3034 1.1e+1 0.00 ± 0.00 TRUE 18 6 0 12 yes hsa-miR-140-5p blast cagugguuuuacccuaugguag uaccacaggguagaaccacggaca cagugguuuuacccuaugguagguuacgucaugcuguucuaccacaggguagaaccacggaca chr16:69933102..69933165:+
chr1_73 6.3 0.00 ± 0.00 STAR 9 4 0 5 yes hsa-miR-197-5p blast uucaccaccuucuccacccagc cggguagagagggcaguggga cggguagagagggcagugggagguaagagcucuucacccuucaccaccuucuccacccagc chr1:109598900..109598961:+
chr9_1987 5.3 0.00 ± 0.00 STAR 7 6 0 1 yes hsa-miR-27b-5p blast uucacaguggcuaaguucugc agagcuuagcugauuggugaa agagcuuagcugauuggugaacagugauugguuuccgcuuuguucacaguggcuaaguucugc chr9:95085462..95085525:+
chr12_2585 4.5 0.00 ± 0.00 TRUE 4 3 0 1 yes hsa-miR-3913-5p blast uuugggacugaucuugaugu caucaagaucagucccaaauau uuugggacugaucuugaugucugccaaaaccuuggcagacaucaagaucagucccaaauau chr12:69584740..69584801:-
chr12_2526 4.4 0.00 ± 0.00 TRUE 4 3 0 1 yes hsa-miR-3913-5p blast uuugggacugaucuugaugu caucaagaucagucccaaauau uuugggacugaucuugaugucugccaagguuuuggcagacaucaagaucagucccaaauau chr12:69584743..69584804:+
chr1_80 4.1 0.00 ± 0.00 TRUE 4 3 0 1 yes hsa-miR-942-5p blast uucucuguuuuggccaugugu cacauggccgaaacagagaagu uucucuguuuuggccauguguguacucacagccccucacacauggccgaaacagagaagu chr1:117094656..117094716:+
chrX_3933 3.6 0.79 ± 0.41 TRUE 5 4 0 1 yes hsa-miR-374a-5p blast uuauaauacaaccugauaagug cuuaucagauuguauuguaauug uuauaauacaaccugauaaguguuauagcacuuaucagauuguauuguaauug chrX:74287293..74287346:-
chr14_2748 3.4 0.79 ± 0.41 TRUE 22 22 0 0 yes hsa-miR-625-5p blast agggggaaaguucuauaguc cuauagaacuuucccccuca agggggaaaguucuauaguccuguaauuagaucucaggacuauagaacuuucccccuca chr14:65471115..65471174:+
chr14_2817 3.2 0.79 ± 0.41 TRUE 22 22 0 0 yes hsa-miR-625-5p blast agggggaaaguucuauaguc cuauagaacuuucccccuca agggggaaaguucuauaguccugagaucuaauuacaggacuauagaacuuucccccuca chr14:65471113..65471172:-
chr15_2919 3.1 0.79 ± 0.41 TRUE 213 213 0 0 yes hsa-miR-629-5p blast uggguuuacguugggagaacu uucucccaacguaagcccagc uggguuuacguugggagaacuuuuacggugaaccaggagguucucccaacguaagcccagc chr15:70079386..70079447:-
chr4_955 3.0 0.79 ± 0.41 TRUE 126 126 0 0 yes hsa-miR-574-5p blast ugagugugugugugugagugu gcucaugcacacacccaca ugagugugugugugugagugugugucgcuccggguccacgcucaugcacacacccaca chr4:38868055..38868113:+
chrX_3992 3.0 0.79 ± 0.41 STAR 3 2 0 1 yes hsa-miR-452-5p blast ucagucucaucugcaaagaa uguuugcagaggaaacugaga uguuugcagaggaaacugagacuuuguaacuaugucucagucucaucugcaaagaa chrX:151959640..151959696:-
chr5_1202 2.8 0.69 ± 0.30 TRUE 90 90 0 0 yes hsa-miR-1294 blast ugugagguuggcauuguugu aacagugccaaccucacagg ugugagguuggcauuguugucuggcauugucugauauacaacagugccaaccucacagg chr5:154347152..154347211:+
chr19_3453 2.8 0.69 ± 0.30 STAR 2 1 0 1 yes hsa-miR-518e-5p blast aaagugcauccuuuuagagug cucuagagggaagcgcuuucu cucuagagggaagcgcuuucuguugucugaaagaaaggaaagugcauccuuuuagagug chr19:53752410..53752469:+
chr19_3527 2.8 0.69 ± 0.30 TRUE 16 16 0 0 yes hsa-miR-150-5p blast ucucccaacccuuguaccagu ugguacaggccugggggaca ucucccaacccuuguaccagugcugggcucagacccugguacaggccugggggaca chr19:49500797..49500853:-
chr1_100 2.7 0.69 ± 0.30 TRUE 11 11 0 0 yes hsa-miR-92b-5p blast agggacgggacgcggugcagu ugcacucgucccggccucc agggacgggacgcggugcaguguuguuuuuucccccgccaauauugcacucgucccggccucc chr1:155195195..155195258:+
chr22_3746 2.7 0.69 ± 0.30 TRUE 75203 75203 0 0 yes hsa-let-7b-5p blast ugagguaguagguuguguggu uauacaaccuacugccuuccc ugagguaguagguugugugguuucagggcagugauguugccccucggaagauaacuauacaaccuacugccuuccc chr22:46113690..46113766:+
chr7_1624 2.7 0.69 ± 0.30 STAR 34 34 0 0 yes hsa-miR-339-5p blast ugagcgccucgacgacagag cuguccuccaggagcucacg cuguccuccaggagcucacgugugccugccugugagcgccucgacgacagag chr7:1022957..1023009:-
chr17_3128 2.7 0.69 ± 0.30 TRUE 28 28 0 0 yes hsa-miR-193a-5p blast ugggucuuugcgggcgagauga aacuggccuacaaagucccagu ugggucuuugcgggcgagaugagggugucggaucaacuggccuacaaagucccagu chr17:31560015..31560071:+
chr11_2380 2.7 0.69 ± 0.30 STAR 12 12 0 0 yes hsa-miR-210-5p blast cugugcgugugacagcggcu ccccugcccaccgcacacug ccccugcccaccgcacacugcgcugccccagacccacugugcgugugacagcggcu chr11:568113..568169:-
chr3_708 2.7 0.69 ± 0.30 TRUE 1088 1088 0 0 yes hsa-miR-26a-5p blast uucaaguaauccaggauaggcu ccuauucuugguuacuugcacg uucaaguaauccaggauaggcugugcaggucccaaugggccuauucuugguuacuugcacg chr3:37969412..37969473:+
chrX_3921 2.6 0.69 ± 0.30 TRUE 1294 1294 0 0 yes hsa-miR-98-5p blast ugagguaguaaguuguauugu uauacaacuuacuacuuuccc ugagguaguaaguuguauuguugugggguagggauauuaggccccaauuagaagauaacuauacaacuuacuacuuuccc chrX:53556240..53556320:-
chr7_1564 2.6 0.69 ± 0.30 TRUE 25 25 0 0 yes hsa-miR-550a-3-5p blast ugccugagggaguaagagcc gucuuacucccucaggcaca ugccugagggaguaagagcccuguuguugucagauagugucuuacucccucaggcaca chr7:32733003..32733061:+
chr7_1677 2.6 0.69 ± 0.30 TRUE 11975 11975 0 0 yes hsa-miR-93-5p blast caaagugcuguucgugcagguag acugcugagcuagcacuucccg caaagugcuguucgugcagguagugugauuacccaaccuacugcugagcuagcacuucccg chr7:100093776..100093837:-
chr22_3724 2.6 0.69 ± 0.30 TRUE 2821 2821 0 0 yes hsa-miR-185-5p blast uggagagaaaggcaguuccuga aggggcuggcuuuccucuggu uggagagaaaggcaguuccugaugguccccuccccaggggcuggcuuuccucuggu chr22:20033152..20033208:+
chr7_1679 2.6 0.69 ± 0.30 TRUE 46 46 0 0 yes hsa-miR-106b-5p blast uaaagugcugacagugcaga cgcacuguggguacuugcug uaaagugcugacagugcagauagugguccucuccgugcuaccgcacuguggguacuugcug chr7:100094002..100094063:-
chr11_2387 2.6 0.69 ± 0.30 TRUE 19 19 0 0 yes hsa-miR-483-5p blast aagacgggaggaaagaagggag cacuccucuccucccgucuucu aagacgggaggaaagaagggagugguuccaucacgccuccucacuccucuccucccgucuucu chr11:2134139..2134202:-
chr8_1836 2.6 0.69 ± 0.30 STAR 1448 1448 0 0 yes hsa-miR-320a-5p blast aaaagcuggguugagagggcga gccuucucuucccgguucuucc gccuucucuucccgguucuucccggagucgggaaaagcuggguugagagggcga chr8:22244974..22245028:-
chr17_3181 2.6 0.69 ± 0.30 TRUE 14 14 0 0 yes hsa-miR-195-5p blast uagcagcacagaaauauugg aauauuggcugugcugcucca uagcagcacagaaauauuggcacagggaagcgagucugccaauauuggcugugcugcucca chr17:7017626..7017687:-
chr19_3492 2.5 0.69 ± 0.30 STAR 17 17 0 0 yes hsa-miR-27a-5p blast uucacaguggcuaaguuccgc agggcuuagcugcuugugagca agggcuuagcugcuugugagcaggguccacaccaagucguguucacaguggcuaaguuccgc chr19:13836446..13836508:-
chr19_3442 2.5 0.69 ± 0.30 TRUE 185 185 0 0 yes hsa-let-7e-5p blast ugagguaggagguuguauaguu cuauacggccuccuagcuuucc ugagguaggagguuguauaguugaggaggacacccaaggagaucacuauacggccuccuagcuuucc chr19:51692792..51692859:+
chr3_855 2.5 0.69 ± 0.30 TRUE 37314 37314 0 0 yes hsa-let-7g-5p blast ugagguaguaguuuguacagu uguacaggccacugccuugcc ugagguaguaguuuguacaguuugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugcc chr3:52268278..52268357:-
chr2_514 2.5 0.69 ± 0.30 TRUE 2240 2240 0 0 yes hsa-miR-26b-5p blast uucaaguaauucaggauagguu ccuguucuccauuacuuggcu uucaaguaauucaggauagguugugugcuguccagccuguucuccauuacuuggcu chr2:218402656..218402712:+
chr9_1984 2.5 0.69 ± 0.30 TRUE 24756 24756 0 0 yes hsa-let-7f-5p blast ugagguaguagauuguauagu uauacaaucuauugccuuccc ugagguaguagauuguauaguugugggguagugauuuuacccuguucaggagauaacuauacaaucuauugccuuccc chr9:94176352..94176430:+
chr5_1197 2.4 0.69 ± 0.30 STAR 426 426 0 0 yes hsa-miR-143-5p blast ugagaugaagcacuguagcu gugcagugcugcaucucugg gugcagugcugcaucucuggucaguugggagucugagaugaagcacuguagcu chr5:149428944..149428997:+
chr19_3444 2.4 0.69 ± 0.30 TRUE 14 13 0 1 yes hsa-miR-125a-5p blast ucccugagacccuuuaaccugu acaggugagguucuugggagc ucccugagacccuuuaaccugugaggacauccagggucacaggugagguucuugggagc chr19:51693267..51693326:+
chr1_230 2.4 0.69 ± 0.30 STAR 25 25 0 0 yes hsa-miR-101-5p blast uacaguacugugauaacugaag ucaguuaucacagugcugaugcu ucaguuaucacagugcugaugcugucuauucuaaagguacaguacugugauaacugaag chr1:65058440..65058499:-
chrX_3923 2.4 0.69 ± 0.30 TRUE 25028 25028 0 0 yes hsa-let-7f-5p blast ugagguaguagauuguauagu uauacagucuacugucuuucc ugagguaguagauuguauaguuuuagggucauaccccaucuuggagauaacuauacagucuacugucuuucc chrX:53557195..53557267:-
chr11_2329 2.4 0.69 ± 0.30 STAR 718 718 0 0 yes hsa-miR-130a-5p blast cagugcaauguuaaaagggca cucuuuucacauugugcuacu cucuuuucacauugugcuacugucugcaccugucacuagcagugcaauguuaaaagggca chr11:57641212..57641272:+
chr12_2581 2.4 0.69 ± 0.30 TRUE 1092 1092 0 0 yes hsa-miR-26a-5p blast uucaaguaauccaggauaggcu ccuauucuugauuacuuguuuc uucaaguaauccaggauaggcuguuuccaucugugaggccuauucuugauuacuuguuuc chr12:57824619..57824679:-
chr7_1687 2.4 0.69 ± 0.30 TRUE 285 285 0 0 yes hsa-miR-182-5p blast uuuggcaaugguagaacucaca gugguucuagacuugccaacua uuuggcaaugguagaacucacacuggugagguaacaggauccggugguucuagacuugccaacua chr7:129770405..129770470:-
chr14_2772 2.4 0.69 ± 0.30 TRUE 23 23 0 0 yes hsa-miR-432-5p blast ucuuggaguaggucauugggugg acuggauggcuccuccaugucu ucuuggaguaggucauuggguggauccucuauuuccuuacgugggccacuggauggcuccuccaugucu chr14:100884495..100884564:+
chr6_1377 2.4 0.69 ± 0.30 TRUE 27 27 0 0 yes hsa-miR-206 blast uggaauguaaggaagugugugg acaugcuucuuuauauccccaua acaugcuucuuuauauccccauauggauuacuuugcuauggaauguaaggaagugugugg chr6:52144362..52144422:+
chr21_3688 2.4 0.69 ± 0.30 TRUE 75 75 0 0 yes hsa-miR-155-5p blast uuaaugcuaaucgugauaggggu uccuacauauuagcauuaaca uuaaugcuaaucgugauagggguuuuugccuccaacugacuccuacauauuagcauuaaca chr21:25573982..25574043:+
chr1_30 2.4 0.69 ± 0.30 STAR 24 24 0 0 yes hsa-miR-1976 blast ggcagcaaggaaggcaggggu cuccugcccuccuugcuguaga ggcagcaaggaaggcagggguccuaagguguguccuccugcccuccuugcuguaga chr1:26554540..26554596:+
chr18_3322 2.3 0.69 ± 0.30 TRUE 6740 6740 0 0 yes hsa-miR-122-5p blast uggagugugacaaugguguuu acgccauuaucacacuaaaua uggagugugacaaugguguuugugucuaaacuaucaaacgccauuaucacacuaaaua chr18:58451087..58451145:+
chr17_3281 2.3 0.69 ± 0.30 TRUE 1452 1452 0 0 yes hsa-miR-142-5p blast cccauaaaguagaaagcacu uguuuccuacuuuauggaug cccauaaaguagaaagcacuacuaacagcacuggaggguguaguguuuccuacuuuauggaug chr17:58331242..58331305:-
chr9_2079 2.3 0.69 ± 0.30 TRUE 359 359 0 0 yes hsa-miR-7-5p blast uggaagacuagugauuuuguug acaaaucacagucugccaua uggaagacuagugauuuuguuguuuuuagauaacuaaaucgacaacaaaucacagucugccaua chr9:83969770..83969834:-
chr22_3744 2.3 0.69 ± 0.30 TRUE 56656 56656 0 0 yes hsa-let-7a-5p blast ugagguaguagguuguauag auacaaucuacugucuuucc ugagguaguagguuguauaguuuggggcucugcccugcuaugggauaacuauacaaucuacugucuuucc chr22:46112751..46112821:+
chr7_1562 2.3 0.69 ± 0.30 TRUE 25 25 0 0 yes hsa-miR-550a-3-5p blast ugccugagggaguaagagcc gucuuacucccucaggcaca ugccugagggaguaagagcccuguuguuguaagauagugucuuacucccucaggcaca chr7:30289816..30289874:+
chr17_3226 2.3 0.69 ± 0.30 STAR 1678 1678 0 0 yes hsa-miR-144-5p blast uacaguauagaugaugua uaucaucauauacuguaag uaucaucauauacuguaaguuugcgaugagacacuacaguauagaugaugua chr17:28861549..28861601:-
chr15_2878 2.3 0.69 ± 0.30 TRUE 359 359 0 0 yes hsa-miR-7-5p blast uggaagacuagugauuuuguug acaaaucccagucuaccuaa uggaagacuagugauuuuguuguugucuuacugcgcucaacaacaaaucccagucuaccuaa chr15:88611855..88611917:+
chr17_3178 2.2 0.69 ± 0.30 STAR 60 57 0 3 yes hsa-miR-22-5p blast aagcugccaguugaagaacu aguucuucaguggcaagcu aguucuucaguggcaagcuuuauguccugacccagcuaaagcugccaguugaagaacu chr17:1713915..1713973:-
chr21_3684 2.2 0.69 ± 0.30 TRUE 675 675 0 0 yes hsa-let-7c-5p blast ugagguaguagguuguau acaaccuucuagcuuucc ugagguaguagguuguaugguuuagaguuacacccugggaguuaacuguacaaccuucuagcuuucc chr21:16539837..16539904:+
chr17_3162 2.2 0.69 ± 0.30 TRUE 139 139 0 0 yes hsa-miR-21-5p blast uagcuuaucagacugauguug acaccagucgaugggcuguc uagcuuaucagacugauguugacuguugaaucucauggcaacaccagucgaugggcuguc chr17:59841272..59841332:+
chr9_1982 2.2 0.69 ± 0.30 TRUE 56662 56662 0 0 yes hsa-let-7a-5p blast ugagguaguagguuguauag auacaaucuacugucuuucc ugagguaguagguuguauaguuuuagggucacacccaccacugggagauaacuauacaaucuacugucuuucc chr9:94175961..94176034:+
chr7_1689 2.1 0.69 ± 0.30 TRUE 37 37 0 0 yes hsa-miR-183-5p blast uauggcacugguagaauuca aauuaccgaagggccauaaa uauggcacugguagaauucacugugaacagucucagucagugaauuaccgaagggccauaaa chr7:129774926..129774988:-
chr7_1598 2.1 0.69 ± 0.30 TRUE 498 498 0 0 yes hsa-miR-335-5p blast ucaagagcaauaacgaaaaaug uuuuucauuauugcuccugacc ucaagagcaauaacgaaaaauguuugucauaaaccguuuuucauuauugcuccugacc chr7:130496125..130496183:+
chrX_3975 2.0 0.69 ± 0.30 TRUE 300 300 0 0 yes hsa-miR-20b-5p blast caaagugcucauagugcaggua acuguaguaugggcacuuccag caaagugcucauagugcagguaguuuuggcaugacucuacuguaguaugggcacuuccag chrX:134169812..134169872:-
chr7_1694 2.0 0.69 ± 0.30 STAR 37 37 0 0 yes hsa-miR-29b-1-5p blast uagcaccauuugaaaucagug cugguuucauauggugguuuaga cugguuucauauggugguuuagauuuaaauagugauugucuagcaccauuugaaaucagug chr7:130877468..130877529:-
chr9_1989 2.0 0.69 ± 0.30 STAR 150 150 0 0 yes hsa-miR-24-1-5p blast uggcucaguucagcaggaacagg ggugccuacugagcugauaucagu ggugccuacugagcugauaucaguucucauuuuacacacuggcucaguucagcaggaacagg chr9:95086024..95086086:+
chr1_350 2.0 0.69 ± 0.30 TRUE 82 82 0 0 yes hsa-miR-320b blast aaaagcuggguugagagggc uuucucuucccagauuucc uuucucuucccagauuucccaaaguugggaaaagcuggguugagagggc chr1:224257050..224257099:-
chr1_332 2.0 0.69 ± 0.30 STAR 56 56 0 0 yes hsa-miR-29c-5p blast uagcaccauuugaaaucgg gauuucuccugguguucaga gauuucuccugguguucagagucuguuuuugucuagcaccauuugaaaucgg chr1:207801867..207801919:-
chr17_3102 2.0 0.69 ± 0.30 TRUE 56 56 0 0 yes hsa-miR-744-5p blast ugcggggcuagggcuaacagc uguugccacuaaccucaacc ugcggggcuagggcuaacagcagucuuacugaagguuuccuggaaaccacgcacaugcuguugccacuaaccucaacc chr17:12081908..12081986:+
chr7_1692 1.9 0.10 ± 0.18 STAR 50 50 0 0 yes hsa-miR-29a-5p blast uagcaccaucugaaaucgg gauuucuuuugguguucaga gauuucuuuugguguucagagucaauauaauuuucuagcaccaucugaaaucgg chr7:130876750..130876804:-
chr19_3388 1.9 0.10 ± 0.18 TRUE 359 359 0 0 yes hsa-miR-7-5p blast uggaagacuagugauuuuguug acaagucacagccggccuca uggaagacuagugauuuuguuguucugauguacuacgacaacaagucacagccggccuca chr19:4770699..4770759:+
chr11_2483 1.9 0.10 ± 0.18 TRUE 56681 56681 0 0 yes hsa-let-7a-5p blast ugagguaguagguuguauag guacagccuccuagcuuucc ugagguaguagguuguauaguuuagaauuacaucaagggagauaacuguacagccuccuagcuuucc chr11:122146522..122146589:-
chrX_3932 1.9 0.10 ± 0.18 TRUE 79 79 0 0 yes hsa-miR-421 blast aucaacagacauuaauugggcg cucauuaaauguuuguugaauga cucauuaaauguuuguugaaugaaaaaaugaaucaucaacagacauuaauugggcg chrX:74218392..74218448:-
chr1_199 1.9 0.10 ± 0.18 TRUE 17 17 0 0 yes hsa-miR-6734-5p blast uugaggggagaaugagguggag ucccucacucuucucucaggu uugaggggagaaugagguggagaagcccagguucugaauccccuucccucacucuucucucaggu chr1:43364645..43364710:-
chr14_2778 1.9 0.10 ± 0.18 TRUE 16 16 0 0 yes hsa-miR-382-5p blast gaaguuguucgugguggauucg aaucauucacggacaacacuuuu gaaguuguucgugguggauucgcuuuacuuaugacgaaucauucacggacaacacuuuu chr14:101054315..101054374:+
chr13_2701 1.9 0.10 ± 0.18 TRUE 163591 163591 0 0 yes hsa-miR-16-5p blast uagcagcacguaaauauuggcg ccaguauuaacugugcugcugaa uagcagcacguaaauauuggcguuaagauucuaaaauuaucuccaguauuaacugugcugcugaa chr13:50048983..50049048:-
chrX_3972 1.8 0.10 ± 0.18 STAR 71 71 0 0 yes hsa-miR-92a-2-5p blast uauugcacuugucccggccugu ggguggggauuuguugcauuacu ggguggggauuuguugcauuacuuguguucuauauaaaguauugcacuugucccggccugu chrX:134169543..134169604:-
chr8_1919 1.8 0.10 ± 0.18 TRUE 542 542 0 0 yes hsa-miR-30d-5p blast uguaaacauccccgacuggaagcu cuuucagucagauguuugcugc uguaaacauccccgacuggaagcuguaagacacagcuaagcuuucagucagauguuugcugc chr8:134804878..134804940:-
chr18_3305 1.7 0.10 ± 0.18 TRUE 41 41 0 0 yes hsa-miR-320c blast aaaagcuggguugagaggg uucucuucccaguucuucc uucucuucccaguucuucccagagucaggaaaagcuggguugagaggg chr18:21683529..21683577:+
chr5_1329 1.7 0.10 ± 0.18 TRUE 16 16 0 0 yes hsa-miR-340-5p blast uuauaaagcaaugagacugauu uccgucucaguuacuuuauagcc uuauaaagcaaugagacugauugucauaugucguuugugggauccgucucaguuacuuuauagcc chr5:180015317..180015382:-
chr18_3311 1.7 0.10 ± 0.18 TRUE 45 45 0 0 yes hsa-miR-320c blast aaaagcuggguugagaggg uucucuuuccaguucuucc uucucuuuccaguucuucccagaauugggaaaagcuggguugagaggg chr18:24321686..24321734:+
chr5_1316 1.7 0.10 ± 0.18 STAR 1101 1101 0 0 yes hsa-miR-103a-1-5p blast agcagcauuguacagggcu cuucuuuacagugcugccuug cuucuuuacagugcugccuuguugcauauggaucaagcagcauuguacagggcu chr5:168560907..168560961:-
chr1_334 1.7 0.10 ± 0.18 STAR 37 37 0 0 yes hsa-miR-29b-2-5p blast uagcaccauuugaaaucagug cugguuucacaugguggcuuaga cugguuucacaugguggcuuagauuuuuccaucuuuguaucuagcaccauuugaaaucagug chr1:207802451..207802513:-
chr20_3541 1.6 0.10 ± 0.18 STAR 1101 1101 0 0 yes hsa-miR-103a-2-5p blast agcagcauuguacagggcu cuucuuuacagugcugccuug cuucuuuacagugcugccuuguagcauucaggucaagcagcauuguacagggcu chr20:3917505..3917559:+
chrX_3838 1.6 0.10 ± 0.18 TRUE 74 74 0 0 yes hsa-miR-660-5p blast uacccauugcauaucggaguug ccuccugugugcauggauuac uacccauugcauaucggaguugugaauucucaaaacaccuccugugugcauggauuac chrX:50013255..50013313:+
chr9_2010 1.6 0.10 ± 0.18 TRUE 14 14 0 0 yes hsa-miR-181b-5p blast acauucauugcugucggug cugaucaaugaaugcaa acauucauugcugucgguggguuugagucugaaucaacucacugaucaaugaaugcaa chr9:124693725..124693783:+
chr10_2234 1.6 0.10 ± 0.18 TRUE 700 700 0 0 yes hsa-miR-107 blast agcagcauuguacagggcu cuucuuuacaguguugccuug cuucuuuacaguguugccuuguggcauggaguucaagcagcauuguacagggcu chr10:89592759..89592813:-
chr9_1935 1.5 0.10 ± 0.18 STAR 25 25 0 0 yes hsa-miR-101-2-5p blast uacaguacugugauaacugaag ucgguuaucaugguaccgaugcu ucgguuaucaugguaccgaugcuguauaucugaaagguacaguacugugauaacugaag chr9:4850307..4850366:+
chr17_3267 1.5 0.10 ± 0.18 TRUE 94 94 0 0 yes hsa-miR-10a-5p blast uacccuguagauccgaauuugu aaauucguaucuaggggaaua uacccuguagauccgaauuuguguaaggaauuuuguggucacaaauucguaucuaggggaaua chr17:48579863..48579926:-
chr4_1044 1.5 0.10 ± 0.18 STAR 11 11 0 0 yes hsa-miR-95-5p blast uucaacggguauuuauugagc ucaauaaaugucuguugaauu ucaauaaaugucuguugaauugaaaugcguuacauucaacggguauuuauugagc chr4:8005312..8005367:-
chr1_321 1.5 0.10 ± 0.18 TRUE 14 14 0 0 yes hsa-miR-181b-5p blast acauucauugcugucggugg acugaacaaugaaugcaa acauucauugcugucgguggguugaacuguguggacaagcucacugaacaaugaaugcaa chr1:198858886..198858946:-
chr7_1647 1.4 0.10 ± 0.18 TRUE 10 10 0 0 yes hsa-miR-550a-3-5p blast ugccugagggaguaagaguc gucuuacucccucaggcaca ugccugagggaguaagaguccuguuguuguaagauagugucuuacucccucaggcaca chr7:29680748..29680806:-
chr1_323 1.3 0.10 ± 0.18 TRUE 32 32 0 0 yes hsa-miR-181a-5p blast aacauucaacgcugucggugagu ccaucgaccguugauuguacc aacauucaacgcugucggugaguuuggaauuaaaaucaaaaccaucgaccguugauuguacc chr1:198859068..198859130:-
chr16_2982 1.3 0.10 ± 0.18 TRUE 10 10 0 0 yes hsa-miR-193b-5p blast cgggguuuugagggcgagaug acuggcccucaaagucccgcu cgggguuuugagggcgagaugaguuuauguuuuauccaacuggcccucaaagucccgcu chr16:14303979..14304038:+
chrX_3935 1.3 0.10 ± 0.18 TRUE 10 10 0 0 yes hsa-miR-361-5p blast uuaucagaaucuccaggggua ccccaggugugauucugauuugc uuaucagaaucuccagggguacuuuauaauuucaaaaagucccccaggugugauucugauuugc chrX:85903638..85903702:-
chr13_2703 1.1 0.10 ± 0.18 TRUE 214 214 0 0 yes hsa-miR-15a-5p blast uagcagcacauaaugguuugu aggccauauugugcugccuca uagcagcacauaaugguuuguggauuuugaaaaggugcaggccauauugugcugccuca chr13:50049129..50049188:-
chrX_3832 1.0 0.10 ± 0.18 TRUE 91 91 0 0 yes hsa-miR-532-5p blast caugccuugaguguaggaccgu ccucccacacccaaggcuugca caugccuugaguguaggaccguuggcaucuuaauuacccucccacacccaaggcuugca chrX:50003166..50003225:+
chr2_490 1.0 0.10 ± 0.18 TRUE 10 10 0 0 yes hsa-miR-10b-5p blast uacccuguagaaccgaauuugu agauucgauucuaggggaaua uacccuguagaaccgaauuugugugguauccguauagucacagauucgauucuaggggaaua chr2:176150328..176150390:+
chr1_77 0.9 0.00 ± 0.00 TRUE 81 81 0 0 yes hsa-miR-320b blast aaaagcuggguugagagggc ccucucuuucuaguucuucc ccucucuuucuaguucuuccuagagugaggaaaagcuggguugagagggc chr1:116671756..116671806:+
chr1_37 0.9 0.00 ± 0.00 STAR 10 5 0 5 yes hsa-miR-30c-5p blast cugggagaggguuguuuacu uguaaacauccuacacucucag uguaaacauccuacacucucagcugugagcucaagguggcugggagaggguuguuuacu chr1:40757299..40757358:+
chr1_343 0.7 0.00 ± 0.00 TRUE 21 21 0 0 yes hsa-miR-664a-5p blast cuggcuagggaaaaugauugga cauuuauccccagccuaca cuggcuagggaaaaugauuggauagaaacuauuauucuauucauuuauccccagccuaca chr1:220200548..220200608:-
chr3_784 0.6 0.00 ± 0.00 TRUE 390 390 0 0 yes hsa-miR-15b-5p blast uagcagcacaucaugguu ucauuauuugcugcucua uagcagcacaucaugguuuacaugcuacagucaagaugcgaaucauuauuugcugcucua chr3:160404606..160404666:+
chr9_2090 0.4 0.00 ± 0.00 STAR 8 8 0 0 yes hsa-miR-32-5p blast caauuuagugugugugauauu uauugcacauuacuaaguugca uauugcacauuacuaaguugcauguugucacggccucaaugcaauuuagugugugugauauu chr9:109046231..109046293:-
chr20_3583 0.2 0.00 ± 0.00 STAR 8 8 0 0 yes hsa-miR-1-5p blast uggaauguaaagaaguauguau acauacuucuuuauaugcccaua acauacuucuuuauaugcccauauggaccugcuaagcuauggaauguaaagaaguauguau chr20:62554311..62554372:+
chr2_459 0.1 0.00 ± 0.00 STAR 8 8 0 0 yes hsa-miR-128-1-5p blast ucacagugaaccggucucuuu cggggccguagcacugucugaga cggggccguagcacugucugagagguuuacauuucucacagugaaccggucucuuu chr2:135665410..135665466:+
chr19_3499 0.1 0.00 ± 0.00 TRUE 8 8 0 0 yes hsa-miR-1270 blast cuggagauauggaagagcugugu aggcuuuucuuuaucuucuaug cuggagauauggaagagcuguguuggguauaaguaacaggcuuuucuuuaucuucuaug chr19:20399283..20399342:-
chr18_3346 0 0.00 ± 0.00 TRUE 8 8 0 0 yes hsa-miR-1-3p blast uggaauguaaagaaguauguau acauacuucuuuauguacccaua acauacuucuuuauguacccauaugaacauacaaugcuauggaauguaaagaaguauguau chr18:21829014..21829075:-
chr10_2284 -0.1 0.00 ± 0.00 STAR 6 6 0 0 yes hsa-miR-202-5p blast agagguauagggcaugggaaaac uuuccuaugcauauacuucuuu uuuccuaugcauauacuucuuugaggaucuggccuaaagagguauagggcaugggaaaac chr10:133247534..133247594:-
chr7_1645 -0.1 0.00 ± 0.00 TRUE 8 8 0 0 yes hsa-miR-196b-5p blast uagguaguuuccuguuguug acagcacgacacugccuuca uagguaguuuccuguuguugggauccaccuuucucucgacagcacgacacugccuuca chr7:27169491..27169549:-
chr1_231 -0.2 0.00 ± 0.00 TRUE 7 7 0 0 yes hsa-miR-186-5p blast caaagaauucuccuuuugggcu cccaaaggugaauuuuuuggg caaagaauucuccuuuugggcuuucugguuuuauuuuaagcccaaaggugaauuuuuuggg chr1:71067641..71067702:-
chr19_3494 -0.2 0.00 ± 0.00 STAR 7 7 0 0 yes hsa-miR-23a-5p blast aucacauugccagggauuucc gguuccuggggaugggauuu gguuccuggggaugggauuugcuuccugucacaaaucacauugccagggauuucc chr19:13836594..13836649:-
chr8_1828 -0.2 0.00 ± 0.00 NA 7 7 0 0 yes hsa-miR-1322 blast uacgucaucguugucaucguc cggugaucccgauggugugag cggugaucccgauggugugagcuggaaauggggugcuacgucaucguugucaucguc chr8:11035221..11035278:-
chr11_2425 -0.3 0.00 ± 0.00 TRUE 7 7 0 0 yes hsa-miR-192-5p blast cugaccuaugaauugacagcc cugccaauuccauaggucacag cugaccuaugaauugacagccagugcucucgucuccccucuggcugccaauuccauaggucacag chr11:64891158..64891223:-
chr11_2427 -0.3 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-194-5p blast uguaacagcaacuccaugugg aguggggcugcuguuaucug uguaacagcaacuccauguggaagugcccacugguuccaguggggcugcuguuaucug chr11:64891367..64891425:-
chr17_3284 -0.4 0.00 ± 0.00 STAR 7 7 0 0 yes hsa-miR-454-5p blast uagugcaauauugcuuauagggu ccuaucaauauugucucugc ccuaucaauauugucucugcuguguaaauaguucugaguagugcaauauugcuuauagggu chr17:59137786..59137847:-
chr6_1463 -0.5 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-4646-5p blast ugggaagaggagcugagggac cccucucccuucccagg ugggaagaggagcugagggacauugcggagagggucucacauugucccucucccuucccagg chr6:31701027..31701089:-
chr12_2493 -0.6 0.00 ± 0.00 STAR 5 5 0 0 yes hsa-miR-200c-5p blast uaauacugccggguaaugaugg gucuuacccagcaguguuugg gucuuacccagcaguguuugggugcgguugggagucucuaauacugccggguaaugaugg chr12:6963703..6963763:+
chr10_2247 -0.6 0.00 ± 0.00 TRUE 5 5 0 0 yes hsa-miR-3157-5p blast uucagccaggcuagugcaguc cugcccuagucuagcugaagc uucagccaggcuagugcagucugcuuugugccaacacuggggugaugacugcccuagucuagcugaagc chr10:96064321..96064390:-
chr11_2457 -0.6 0.00 ± 0.00 TRUE 4 4 0 0 yes hsa-miR-1304-5p blast cgguuugaggcuacagugaga ucacuguagccucgaaccccu cgguuugaggcuacagugagaugugauccugccacaucucacuguagccucgaaccccu chr11:93733689..93733748:-
chr7_1629 -0.7 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-589-5p blast ugagaaccacgucugcucug gaacaaaugccgguucccaga ugagaaccacgucugcucugagcuggguacugccuguucagaacaaaugccgguucccaga chr7:5495833..5495894:-
chr6_1500 -0.8 0.00 ± 0.00 TRUE 7 5 0 2 yes hsa-miR-30c-5p blast uguaaacauccuacacucucag cugggagaaggcuguuuacu uguaaacauccuacacucucagcuguggaaaguaagaaagcugggagaaggcuguuuacu chr6:71376965..71377025:-
chr17_3216 -0.9 0.00 ± 0.00 STAR 15 15 0 0 no hsa-miR-1180-5p blast uuuccggcucgcgugggugug gacccacccggccgggaaua gacccacccggccgggaauagugcuccugguuguuuccggcucgcgugggugug chr17:19344513..19344567:-
chr11_2417 -1.0 0.00 ± 0.00 TRUE 108 108 0 0 no hsa-miR-1908-5p blast cggcggggacggcgauuggu cggccgccggcuccgccccg cggcggggacggcgauugguccguauguguggugccaccggccgccggcuccgccccg chr11:61815171..61815229:-
chr20_3540 -1.1 0.00 ± 0.01 TRUE 27 27 0 0 no hsa-miR-1292-5p blast ugggaacggguuccggcagacg gccccggcucccguuccaggu ugggaacggguuccggcagacgcugagguugcguugacgcucgcgccccggcucccguuccaggu chr20:2652778..2652843:+
chrX_3979 -1.2 0.00 ± 0.01 TRUE 4 4 0 0 yes hsa-miR-503-5p blast uagcagcgggaacaguucugca ggguauuguuuccgcugccagg uagcagcgggaacaguucugcagugagcgaucggugcucugggguauuguuuccgcugccagg chrX:134546330..134546393:-
chr2_656 -1.2 0.00 ± 0.01 STAR 27 27 0 0 no hsa-miR-375-5p blast uuuguucguucggcucgcg cgagccccucgcacaaacc cgagccccucgcacaaaccggaccugagcguuuuguucguucggcucgcg chr2:219001650..219001700:-
chr5_1204 -1.3 0.00 ± 0.01 TRUE 5 5 0 0 yes hsa-miR-146a-5p blast ugagaacugaauuccauggguug accucugaaauucaguucuucag ugagaacugaauuccauggguugugucagugucagaccucugaaauucaguucuucag chr5:160485371..160485429:+
chr1_170 -1.3 0.00 ± 0.01 TRUE 4 4 0 0 yes hsa-miR-3124-5p blast uucgcgggcgaaggcaaagucg acuuuccucacucccgugaagu uucgcgggcgaaggcaaagucgauuuccaaaagugacuuuccucacucccgugaagu chr1:248826382..248826439:+
chr2_544 -1.3 0.00 ± 0.01 STAR 4 4 0 0 yes hsa-miR-1301-5p blast uugcagcugccugggagugacuuc ggucgcucuaggcaccgcagca ggucgcucuaggcaccgcagcacugugcuggggauguugcagcugccugggagugacuuc chr2:25328650..25328710:-
chr22_3734 -1.3 0.00 ± 0.01 TRUE 5 5 0 0 yes hsa-miR-3200-5p blast aaucugagaaggcgcacaaggu cuugcgcuacucaggucug aaucugagaaggcgcacaagguuuguguccaauacaguccacaccuugcgcuacucaggucug chr22:30731568..30731631:+
chrX_3804 -1.4 0.00 ± 0.01 TRUE 5 5 0 0 yes hsa-miR-651-5p blast uuuaggauaagcuugacu gaaaguguauccuaaaag uuuaggauaagcuugacuuuuguucaaauaaaaaugcaaaaggaaaguguauccuaaaag chrX:8126979..8127039:+
chr1_341 -1.4 0.00 ± 0.01 TRUE 5 5 0 0 yes hsa-miR-194-5p blast uguaacagcaacuccaugugg aguggagaugcuguuacuuu uguaacagcaacuccauguggacuguguaccaauuuccaguggagaugcuguuacuuu chr1:220118169..220118227:-
chr19_3490 -1.4 0.00 ± 0.01 STAR 147 147 0 0 no hsa-miR-24-2-5p blast uggcucaguucagcaggaacagg cgugccuacugagcugaaacacagu cgugccuacugagcugaaacacaguugguuuguguacacuggcucaguucagcaggaacagg chr19:13836287..13836349:-
chr22_3727 -1.4 0.00 ± 0.01 STAR 257 257 0 0 no hsa-miR-130b-5p blast cagugcaaugaugaaagggca cucuuucccuguugcacuacu cucuuucccuguugcacuacuauaggccgcugggaagcagugcaaugaugaaagggca chr22:21653316..21653374:+
chr19_3515 -1.4 0.00 ± 0.01 TRUE 3 3 0 0 yes hsa-miR-641 blast aaagacauaggauagaguca acuguccuaugucuuucc aaagacauaggauagagucaccucuguccucuguccucuaccuauagaggugacuguccuaugucuuucc chr19:40282556..40282626:-
chrX_3989 -1.4 0.00 ± 0.01 TRUE 4 4 0 0 yes hsa-miR-224-5p blast caagucacuagugguuccguuuag aaauggugcccuagugacuacaa caagucacuagugguuccguuuaguagaugauugugcauuguuucaaaauggugcccuagugacuacaa chrX:151958582..151958651:-
chr4_992 -1.5 0.00 ± 0.01 TRUE 4 4 0 0 yes hsa-miR-576-5p blast auucuaauuucuccacgucuuu agauguggaaaaauuggaaucc auucuaauuucuccacgucuuugguaauaagguuuggcaaagauguggaaaaauuggaaucc chr4:109488712..109488774:+
chr10_2277 -1.5 0.00 ± 0.01 TRUE 40 40 0 0 no hsa-miR-2110 blast uuggggaaacggccgcugagu ucaccgcggucuuuuccucccac uuggggaaacggccgcugagugaggcgucggcuguguuucucaccgcggucuuuuccucccac chr10:114174109..114174172:-
chr19_3489 -1.5 0.00 ± 0.01 TRUE 147 147 0 0 no hsa-miR-24-3p blast uggcucaguucagcaggaacagg ugccuucccugggugggcugaugcuugg uggcucaguucagcaggaacaggggucaagcccccuuggagccugcagccccugccuucccugggugggcugaugcuugg chr19:13836230..13836310:-
chr6_1354 -1.5 0.00 ± 0.01 TRUE 43 43 0 0 no hsa-miR-877-5p blast uagaggagauggcgcaggggac ccucuucucccuccucccag uagaggagauggcgcaggggacacgggcaaagacuuggggguuccugggacccucagacguguguccucuucucccuccucccag chr6:30584332..30584417:+
chr17_3185 -1.5 0.00 ± 0.01 TRUE 59 59 0 0 no hsa-miR-324-5p blast cgcauccccuagggcauuggug ccacugccccaggugcugcugg cgcauccccuagggcauugguguaaagcuggagacccacugccccaggugcugcugg chr17:7223307..7223364:-
chr8_1860 -1.6 0.00 ± 0.01 TRUE 15123 15123 0 0 no hsa-miR-486-5p blast uccuguacugagcugccccgag cagcggccggcucugauc cagcggccggcucugaucuccauccucccuggggcauccuguacugagcugccccgag chr8:41660483..41660541:-
chr10_2264 -1.6 0.00 ± 0.01 STAR 22 22 0 0 no hsa-miR-1307-5p blast cucggcguggcgucggucgugg ucgaccggaccucgaccggcuc ucgaccggaccucgaccggcucgucuguguugccaaucgacucggcguggcgucggucgugg chr10:103394299..103394361:-
chr22_3743 -1.7 0.00 ± 0.01 TRUE 56656 56656 0 0 no hsa-let-7a-5p blast ugagguaguagguuguauag ccaagaccgacugcccuuu ccaagaccgacugcccuuuggggugagguaguagguuguauag chr22:46112728..46112771:+
chrX_3842 -1.7 0.00 ± 0.01 TRUE 190 190 0 0 no hsa-miR-223-3p blast ugucaguuugucaaauacccc gauaugacgaauggacugc ugucaguuugucaaauaccccaagugcggcacaugcuuaccagcucuaggccagggcagaugggauaugacgaauggacugc chrX:66018936..66019018:+
chr14_2768 -1.8 0.00 ± 0.01 TRUE 3 3 0 0 yes hsa-miR-345-5p blast gcugacuccuaguccagggcucg ggcccugaacgaggggucuggag gcugacuccuaguccagggcucgugauggcuggugggcccugaacgaggggucuggag chr14:100307875..100307933:+
chr10_2255 -1.8 0.00 ± 0.01 TRUE 4 4 0 0 yes hsa-miR-1287-5p blast ugcuggaucagugguucgaguc cucuagccacagaugcagugau ugcuggaucagugguucgagucugagccuuuaaaagccacucuagccacagaugcagugau chr10:98395231..98395292:-
chr19_3441 -1.9 0.00 ± 0.01 TRUE 185 185 0 0 no hsa-let-7e-5p blast ugagguaggagguuguauaguu cuguccaccugccgcgcc cuguccaccugccgcgccccccgggcugagguaggagguuguauaguu chr19:51692766..51692814:+
chr8_1918 -2.0 0.00 ± 0.01 STAR 4 4 0 0 yes hsa-miR-30b-5p blast cugggagguggauguuuacu uaaacauccuacacucagcu uaaacauccuacacucagcuguaauacauggauuggcugggagguggauguuuacu chr8:134800533..134800589:-
chr4_1048 -2.0 0.00 ± 0.01 TRUE 2 2 0 0 yes hsa-miR-3138 blast gacagugagguagagggagu uucccccaccucacugccc uucccccaccucacugcccgggugcccacaagacuguggacagugagguagagggagu chr4:10078621..10078679:-
chr10_2110 -2.1 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-3155b blast ccucccacugcagagccugg aggcucugcagugggaacug ccucccacugcagagccuggggagccggacagcucccuucccaggcucugcagugggaacug chr10:6152206..6152268:+
chr11_2302 -2.1 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-610 blast ugagcuaaaugugugcuggga ccagcacacauuuagcucaca ugagcuaaaugugugcugggacacauuugagccaaaugucccagcacacauuuagcucaca chr11:28056829..28056890:+
chr8_1769 -2.1 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-3150a-5p blast cuggggagauccucgagguugg aaccucgacgaucuccucagca aaccucgacgaucuccucagcaccugaacgccaaggcuggggagauccucgagguugg chr8:95072925..95072983:+
chrX_3970 -2.1 0.01 ± 0.03 STAR 4 4 0 0 yes hsa-miR-363-5p blast aauugcacgguauccaucugua cggguggaucacgaugcaauuuu cggguggaucacgaugcaauuuugaugaguaucauaggagaaaaauugcacgguauccaucugua chrX:134169381..134169446:-
chr22_3730 -2.2 0.01 ± 0.03 NA 1 1 0 0 yes hsa-miR-3199 blast uaggagaaaguuucuggaaugu cuuccagaaacuuucuccuaag uaggagaaaguuucuggaaugucagaacuuccagaaacuuucuccuaag chr22:27920545..27920594:+
chr11_2405 -2.2 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-610 blast ugagcuaaaugugugcuggga ccagcacacauuuagcucacc ugagcuaaaugugugcugggacauuuggcucaaaugugucccagcacacauuuagcucacc chr11:28056827..28056888:-
chr15_2895 -2.2 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-627-5p blast ugagucucuaagaaaagaggag ccucuuuucuuugagacucacu ugagucucuaagaaaagaggaggugguuguuuuccuccucuuuucuuugagacucacu chr15:42199592..42199650:-
chr16_2984 -2.2 0.01 ± 0.03 TRUE 11 11 0 0 no hsa-miR-484 blast ucaggcucaguccccucccga ggggggugacccuggcu ucaggcucaguccccucccgauaaaccccuaaauagggacuuucccggggggugacccuggcu chr16:15643300..15643363:+
chrX_3977 -2.2 0.01 ± 0.03 TRUE 7 7 0 0 yes hsa-miR-18b-5p blast uaaggugcaucuagugcag gcccuaaaugccccuucuggc uaaggugcaucuagugcaguuagugaagcagcuuagaaucuacugcccuaaaugccccuucuggc chrX:134170041..134170106:-
chr19_3428 -2.3 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-769-5p blast ugagaccucuggguucugagcu cugggaucuccggggucuuggu ugagaccucuggguucugagcugugauguugcucucgagcugggaucuccggggucuuggu chr19:46018960..46019021:+
chr19_3400 -2.3 0.01 ± 0.03 TRUE 3 3 0 0 yes hsa-miR-6515-5p blast uuggaggguguggaagacauc ucucuucaucuaccccccagga uuggaggguguggaagacaucugggccaacucugaucucuucaucuaccccccagga chr19:12940485..12940542:+
chr14_2781 -2.4 0.01 ± 0.03 STAR 3 3 0 0 yes hsa-miR-409-5p blast cgaauguugcucggugaaccccu agguuacccgagcaacuuugca agguuacccgagcaacuuugcaucuggacgacgaauguugcucggugaaccccu chr14:101065313..101065367:+
chr19_3431 -2.4 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-3190-5p blast aagguagacggccagagaggug ccugucuggccagcuacgucc ccugucuggccagcuacguccccacggcccuugucaguguggaagguagacggccagagaggug chr19:47226950..47227014:+
chr19_3456 -2.4 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-516a-5p blast uucucgaggaaagaagcacuu gugcuuccuuucagaggg uucucgaggaaagaagcacuuucuguugucugaaagaaaagaaagugcuuccuuucagaggg chr19:53756755..53756817:+
chr5_1317 -2.4 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-218-5p blast uugugcuugaucuaaccau gguucugucaagcaccgcg uugugcuugaucuaaccaugugguggaacgauggaaacggaacaugguucugucaagcaccgcg chr5:168768167..168768231:-
chr6_1421 -2.5 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-3691-5p blast uaguggaugauggagacucgg aagucugcgucauccucuccu uaguggaugauggagacucgguacccacugcugaggguggggaccaagucugcgucauccucuccu chr6:5148243..5148309:-
chrX_3960 -2.6 0.01 ± 0.03 STAR 2 2 0 0 yes hsa-miR-766-5p blast cuccagccccacagccucagc ggaggaauuggugcuggucuu ggaggaauuggugcuggucuuucauuuuggauuugacuccagccccacagccucagc chrX:119646762..119646819:-
chr1_115 -2.6 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-3120-5p blast cacagcaaguguagacaggca ccugucugugccugcuguaca ccugucugugccugcuguacaggugagcggauguucugcacagcaaguguagacaggca chr1:172138819..172138878:+
chr19_3458 -2.6 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-516a-5p blast uucucgaggaaagaagcacuu gugcuuccuuucagaggg uucucgaggaaagaagcacuuucuguugucugaaagaaaagaaagugcuuccuuucagaggg chr19:53761147..53761209:+
chr17_3183 -2.7 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-497-5p blast cagcagcacacugugguuugua caaaccacacugugguguuagagcgag cagcagcacacugugguuuguacggcacuguggccacguccaaaccacacugugguguuagagcgag chr17:7017932..7017999:-
chr3_849 -2.7 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-5193 blast acugggauggggguugggggg uccucuaccucaucccaguuc acugggauggggguuggggggagguaagaagucucugacuccuccucuaccucaucccaguuc chr3:49806162..49806225:-
chr1_3 -2.7 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-429 blast uaauacugucugguaaaaccgu gucuuaccagacaugguuaga gucuuaccagacaugguuagaccuggcccucugucuaauacugucugguaaaaccgu chr1:1169019..1169076:+
chr14_2780 -2.7 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-485-5p blast agaggcuggccgugauga auacacggcucuccucucu agaggcuggccgugaugaauucgauucaucaaagcgagucauacacggcucuccucucu chr14:101055426..101055485:+
chrX_3974 -2.7 0.01 ± 0.03 STAR 2 2 0 0 yes hsa-miR-19b-2-5p blast ugugcaaauccaugcaaaacuga aguuuugcagguuugcauuuc aguuuugcagguuugcauuucagcguauauauguauauguggcugugcaaauccaugcaaaacuga chrX:134169682..134169748:-
chr17_3118 -2.8 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-4723-5p blast ugggggagccaugagauaaga cccucucuggcuccucccca ugggggagccaugagauaagagcaccuccuagagaauguugaacuaaaggugcccucucuggcuccucccca chr17:28360659..28360731:+
chr20_3556 -2.8 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-499a-5p blast uuaagacuugcagugauguuu acaucacagcaagucugugcu uuaagacuugcagugauguuuaacuccucuccacgugaacaucacagcaagucugugcu chr20:34990407..34990466:+
chr5_1232 -2.8 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-4635 blast ucuugaagucagaacccgca uggguucugaccccacuuggauc uggguucugaccccacuuggaucacgccgacaacacuggucuugaagucagaacccgca chr5:1062904..1062963:-
chr14_2827 -2.8 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-3173-5p blast ugcccugccuguuuucuccuuug aaggaggaaauaggcaggccagg ugcccugccuguuuucuccuuugugauuuuaugagaacaaaggaggaaauaggcaggccagg chr14:95137920..95137982:-
chr2_426 -2.8 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-3127-5p blast aucagggcuuguggaauggga cccuucugcaggccugcugg aucagggcuuguggaaugggaaggagaagggacgcuuccccuucugcaggccugcugg chr2:96798287..96798345:+
chr4_944 -2.8 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-218-5p blast uugugcuugaucuaaccau gguuccgucaagcaccaug uugugcuugaucuaaccaugugguugcgagguaugaguaaaacaugguuccgucaagcaccaug chr4:20528298..20528362:+
chr13_2665 -2.8 0.01 ± 0.03 STAR 2 2 0 0 yes hsa-miR-19a-5p blast ugugcaaaucuaugcaaaacuga aguuuugcauaguugcacuac aguuuugcauaguugcacuacaagaagaauguaguugugcaaaucuaugcaaaacuga chr13:91350903..91350961:+
chr3_751 -2.9 0.01 ± 0.03 STAR 2 2 0 0 yes hsa-miR-4446-5p blast cagggcuggcagugacaugg auuucccugccauucccuuggc auuucccugccauucccuuggcuucaauuuacucccagggcuggcagugacaugg chr3:113594882..113594937:+
chr2_676 -2.9 0.01 ± 0.03 TRUE 2 2 0 0 yes hsa-miR-4440 blast ugucguggggcuugcuggc caguggggcuugcuggcu caguggggcuugcuggcuugcaccgugacucccucucaccaagcaagugucguggggcuugcuggc chr2:239068831..239068897:-
chr12_2508 -2.9 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-196a-5p blast uagguaguuucauguuguuggg cggcaacaagaaacugccugag uagguaguuucauguuguugggauugaguuuugaacucggcaacaagaaacugccugag chr12:53991761..53991820:+
chrX_3843 -3.0 0.01 ± 0.03 STAR 2 2 0 0 yes hsa-miR-676-5p blast cuguccuaagguuguugaguug acucuucaaccucaggacuugca acucuucaaccucaggacuugcagaauuaauggaaugcuguccuaagguuguugaguug chrX:70022861..70022920:+
chr19_3451 -3.0 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-518c-5p blast caaagcgcuucucuuuagagug cucuggagggaagcacuuucuguu cucuggagggaagcacuuucuguugucugaaagaaaacaaagcgcuucucuuuagagug chr19:53708758..53708817:+
chr1_192 -3.0 0.01 ± 0.03 TRUE 10 7 0 3 no hsa-miR-3605-5p blast ugaggauggauagcaaggaag ccuccguguuaccuguccucu ugaggauggauagcaaggaagccgcucccaccugacccucacggccuccguguuaccuguccucu chr1:33332406..33332471:-
chr8_1751 -3.0 0.01 ± 0.03 STAR 1 1 0 0 yes hsa-miR-124-5p blast uaaggcacgcggugaaugc guucacagcggaccuugau guucacagcggaccuugauuuaaugucauacaauuaaggcacgcggugaaugc chr8:64379175..64379228:+
chr11_2429 -3.0 0.01 ± 0.03 TRUE 1 1 0 0 yes hsa-miR-6750-5p blast cagggaacagcugggugagcu cucacccucugcucccagcu cagggaacagcugggugagcugcugccccagaggcccagcagguguccagaacucacccucugcucccagcu chr11:64898360..64898432:-
chr14_2773 -3.1 0.00 ± 0.00 STAR 2 2 0 0 yes hsa-miR-376c-5p blast aacauagaggaaauuccacgu guggauauuccuucuauguuua guggauauuccuucuauguuuauguuauuuaugguuaaacauagaggaaauuccacgu chr14:101039694..101039752:+
chr2_680 -3.1 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-4440 blast ugucguggggcuugcuggc caguggggcuugcuggcu caguggggcuugcuggcuugcaccgugacucccucucaccaagcaagugucguggggcuugcuggc chr2:239069468..239069534:-
chr9_2020 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-6877-5p blast ucagggccgaaggguggaagcu ccucugcccuuggccucccca ucagggccgaaggguggaagcugcuggugcucaucucagccucugcccuuggccucccca chr9:133051998..133052058:+
chr19_3447 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-519c-5p blast cucuagagggaagcgcuuucu aaagugcauccuuuuagaggu cucuagagggaagcgcuuucuguugucugaaagaaaagaaagugcauccuuuuagaggu chr19:53695224..53695283:+
chr10_2170 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-146b-5p blast ugagaacugaauuccauaggcugu ugcccuguggacucaguucuggu ugagaacugaauuccauaggcugugagcucuagcaaugcccuguggacucaguucuggu chr10:102436519..102436578:+
chr1_185 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-34a-5p blast uggcagugucuuagcugguugu aaucagcaaguauacugcccua uggcagugucuuagcugguuguugugagcaauaguaaggaagcaaucagcaaguauacugcccua chr1:9151691..9151756:-
chr19_3446 -3.2 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-1323 blast ucaaaacugaggggcauuuu agugcacccaguuuugggg ucaaaacugaggggcauuuucugugguuugaaaggaaagugcacccaguuuugggg chr19:53671977..53672033:+
chrX_3911 -3.2 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-221-5p blast accuggcauacaauguag acauugucugcuggguuuc accuggcauacaauguagauuucuguguucguuaggcaacagcuacauugucugcuggguuuc chrX:45746179..45746242:-
chr7_1701 -3.2 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-10399-5p blast aauuacagauugucucagaga ucucggacaagcuguaggucc aauuacagauugucucagagaaaacaaaugaguuacucucucggacaagcuguaggucc chr7:139044098..139044157:-
chr7_1680 -3.2 0.00 ± 0.00 TRUE 46 46 0 0 no hsa-miR-106b-5p blast uaaagugcugacagugcaga cccaccucccgcuccagc cccaccucccgcuccagcccugccggggcuaaagugcugacagugcaga chr7:100094043..100094092:-
chr2_458 -3.2 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-3679-5p blast ugaggauauggcagggaagggg ccuuccccccaguaaucuucauc ugaggauauggcagggaaggggaguuucccucuauucccuuccccccaguaaucuucauc chr2:134127129..134127189:+
chr20_3585 -3.2 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-124-5p blast uaaggcacgcggugaaugc guucacagcggaccuugau guucacagcggaccuugauuuaaugucuauacaauuaaggcacgcggugaaugc chr20:63178516..63178570:+
chr1_355 -3.2 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-6741-5p blast gugggugcuggugggagccgugc ucggcucucucccucaccc gugggugcuggugggagccgugcccuggccacucauucggcucucucccucaccc chr1:225922082..225922137:-
chr17_3286 -3.2 0.00 ± 0.00 STAR 3 3 0 0 yes hsa-miR-301a-5p blast cagugcaauaguauugucaaagc ucugacuuuauugcacuacu ucugacuuuauugcacuacuguacuuuacagcuagcagugcaauaguauugucaaagc chr17:59151148..59151206:-
chrX_3898 -3.3 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-664b-5p blast ugggcuaagggagaugauugggu ucauuugccucccagccuaca ugggcuaagggagaugauuggguagaaaguauuauucuauucauuugccucccagccuaca chrX:154768595..154768656:+
chr7_1644 -3.3 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-148a-5p blast ucagugcacuacagaacuuug aaguucugagacacuccgacu aaguucugagacacuccgacucugaguaugauagaagucagugcacuacagaacuuug chr7:25949922..25949980:-
chr11_2481 -3.3 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-125b-5p blast ucccugagacccuaacuug gguuaggcucuugggagcu ucccugagacccuaacuugugauguuuaccguuuaaauccacggguuaggcucuugggagcu chr11:122099768..122099830:-
chr9_2047 -3.3 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-31-5p blast aggcaagaugcuggcauagc uaugccaacauauugccauc aggcaagaugcuggcauagcuguugaacugggaaccugcuaugccaacauauugccauc chr9:21512119..21512178:-
chr6_1342 -3.3 0.00 ± 0.00 TRUE 4 4 0 0 yes hsa-miR-3143 blast agauaacauuguaaagcgcu cucuuuacaauguuucuaa agauaacauuguaaagcgcuucuuucgcgguugggcuggagcaacucuuuacaauguuucuaa chr6:27147626..27147689:+
chr19_3449 -3.3 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-518b blast caaagcgcuccccuuuagagg uccagagggaagcgcuuucuguu uccagagggaagcgcuuucuguugucugaaagaaaacaaagcgcuccccuuuagagg chr19:53702750..53702807:+
chr13_2664 -3.3 0.00 ± 0.00 TRUE 42 42 0 0 no hsa-miR-18a-5p blast uaaggugcaucuagugcagauag acugcccuaagugcuccuucuggc uaaggugcaucuagugcagauagugaaguagauuagcaucuacugcccuaagugcuccuucuggc chr13:91350755..91350820:+
chr8_1822 -3.3 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-124-5p blast uaaggcacgcggugaaugc guucacagcggaccuugau guucacagcggaccuugauuuaaauguccauacaauuaaggcacgcggugaaugc chr8:9903401..9903456:-
chr7_1577 -3.3 0.00 ± 0.00 STAR 2 2 0 0 yes hsa-miR-590-5p blast uaauuuuauguauaagcuagu gagcuuauucauaaaagugca gagcuuauucauaaaagugcaguauggugaagucaaucuguaauuuuauguauaagcuagu chr7:74191212..74191273:+
chr17_3184 -3.4 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-497-5p blast cagcagcacacugugguuugua caacccaccccgguccugcuccc caacccaccccgguccugcucccgccccagcagcacacugugguuugua chr17:7017977..7018026:-
chr19_3459 -3.4 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-519a-2-5p blast aaagugcauccuuuuagagug cucuacagggaagcgcuuucu cucuacagggaagcgcuuucuguugucugaaagaaaggaaagugcauccuuuuagagug chr19:53762358..53762417:+
chr21_3686 -3.5 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-125b-5p blast ucccugagacccuaacuug agucaggcucuugggacc ucccugagacccuaacuugugagguauuuuaguaacaucacaagucaggcucuugggacc chr21:16590252..16590312:+
chr3_705 -3.5 0.00 ± 0.00 STAR 8 8 0 0 no hsa-miR-128-2-5p blast ucacagugaaccggucucuu ggggccgauacacuguacgaga ggggccgauacacuguacgagagugaguagcaggucucacagugaaccggucucuu chr3:35744490..35744546:+
chr17_3269 -3.6 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-196a-5p blast uagguaguuucauguuguuggg caacaacauuaaaccacccgau uagguaguuucauguuguugggccuggguuucugaacacaacaacauuaaaccacccgau chr17:48632493..48632553:-
chr17_3270 -3.7 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-196a-5p blast uagguaguuucauguuguuggg ugaauuggaacugcugagu ugaauuggaacugcugagugaauuagguaguuucauguuguuggg chr17:48632531..48632576:-
chr9_2051 -3.7 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-873-5p blast gcaggaacuugugagucu acugaugaguucccggga gcaggaacuugugagucuccuauugaaaaugaacaggagacugaugaguucccggga chr9:28888888..28888945:-
chr1_255 -3.8 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-3675-3p blast augggggcuucuguagagauuu aucucuaaggaacucccccaagc augggggcuucuguagagauuucuaugagaacaucucuaaggaacucccccaagc chr1:143541651..143541706:-
chr1_20 -3.8 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-3675-3p blast augggggcuucuguagagauuu aucucuaaggaacucccccaaac augggggcuucuguagagauuucuaugagaacaucucuaaggaacucccccaaac chr1:16681266..16681321:+
chr7_1648 -3.9 0.00 ± 0.00 TRUE 10 10 0 0 no hsa-miR-550a-3-5p blast ugccugagggaguaagaguc ccuaagaaccugguauu ccuaagaaccugguauuuugaugcuuugcuggcuggugcagugccugagggaguaagaguc chr7:29680786..29680847:-
chr10_2117 -3.9 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-511-5p blast ugaauguguagcaaaagacaga ugucuuuugcucugcagucagu ugucuuuugcucugcagucaguaaauauuuuuuugugaauguguagcaaaagacaga chr10:17845122..17845179:+
chr17_3172 -3.9 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-6516-5p blast uuugcaguaacaggugugagca aucauguaugauacugcaaaca uuugcaguaacaggugugagcauucuagcagcaguuugaugaucauguaugauacugcaaaca chr17:77089427..77089490:+
chr1_18 -3.9 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-3675-3p blast augggggcuucuguagagauuu aucucuaaggaacucccccaaac augggggcuucuguagagauuucuaugagaacaucucuaaggaacucccccaaac chr1:16548925..16548980:+
chr7_1678 -4.0 0.00 ± 0.00 TRUE 11975 11975 0 0 no hsa-miR-93-5p blast caaagugcuguucgugcagguag uccugugcuacagaccuuccuu uccugugcuacagaccuuccuuucuguccucccgucuuggaccucaguccugggggcuccaaagugcuguucgugcagguag chr7:100093814..100093896:-
chr19_3387 -4.0 0.00 ± 0.00 TRUE 359 359 0 0 no hsa-miR-7-5p blast uggaagacuagugauuuuguug uuagaguggcuguggucuagugcu uuagaguggcuguggucuagugcuguguggaagacuagugauuuuguug chr19:4770672..4770721:+
chr12_2509 -4.2 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-148b-5p blast cagugcaucacagaacuu guucuguuauacacucaggc guucuguuauacacucaggcuguggcucucugaaagucagugcaucacagaacuu chr12:54337241..54337296:+
chr21_3697 -4.3 0.00 ± 0.00 TRUE 7 7 0 0 no hsa-miR-6815-5p blast gguggcgccggaggaguca gcgucugccgccuc gcgucugccgccucguggggacuuggagcguggggugcauuuccauguagacacuguagguggcgccggaggaguca chr21:45478214..45478291:+
chr21_3698 -4.4 0.00 ± 0.00 TRUE 7 7 0 0 no hsa-miR-6815-5p blast gguggcgccggaggaguca gcuucucuugcacaccca gguggcgccggaggagucauuucccaucacuaauggcuucucuugcacaccca chr21:45478272..45478325:+
chr14_2775 -4.4 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-889-5p blast uuaauaucggacaaccauuguu gaauggcuguccguaguaugguc gaauggcuguccguaguauggucucuauauuuaugaugauuaauaucggacaaccauuguu chr14:101047909..101047970:+
chr9_2089 -4.5 0.00 ± 0.00 TRUE 8 8 0 0 no hsa-miR-32-3p blast caauuuagugugugugauauu ugcaugcacacggguauggc caauuuagugugugugauauuuucacaugagugcaugcacacggguauggc chr9:109046201..109046252:-
chr10_2283 -4.6 0.00 ± 0.00 TRUE 6 6 0 0 no hsa-miR-202-3p blast agagguauagggcaugggaaaac gcaccagugcaccugcaccugcucc agagguauagggcaugggaaaacggggcggucggguccuccccagcggcaccugcaccagugcaccugcaccugcucc chr10:133247479..133247557:-
chr17_3287 -4.8 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-3064-5p blast ucuggcuguuguggugugca cacacugcaacaccuuaca ucuggcuguuguggugugcaaaacuccguacauugcuauuuugccacacugcaacaccuuaca chr17:64500774..64500837:-
chr9_1981 -5.1 0.00 ± 0.00 TRUE 56662 56662 0 0 no hsa-let-7a-5p blast ugagguaguagguuguauag gugauuccuuuucaccauucacc gugauuccuuuucaccauucacccuggauguucucuucacugugggaugagguaguagguuguauag chr9:94175914..94175981:+
chr5_1201 -5.3 0.00 ± 0.00 TRUE 90 90 0 0 no hsa-miR-1294 blast ugugagguuggcauuguugu uucauuuaugaucucaccga uucauuuaugaucucaccgaguccugugagguuggcauuguugu chr5:154347128..154347172:+
chr5_1254 -5.5 0.00 ± 0.00 TRUE 3 3 0 0 no hsa-miR-4508 blast ggggcggggcugggcgcgc gcgccgcagggaagacugg gcgccgcagggaagacuggcggggggcggugucugggcuggggcggggcugggcgcgc chr5:40679747..40679805:-
chr16_3056 -5.5 0.00 ± 0.00 STAR 3 3 0 0 no hsa-miR-6511b-5p blast ucaccaccccuucugccugca caggcagaaguggggcugaca caggcagaaguggggcugacagggcagaggguugcgcccccucaccaccccuucugccugca chr16:2106678..2106740:-
chr16_3068 -5.5 0.00 ± 0.00 STAR 3 3 0 0 no hsa-miR-6511b-5p blast ucaccaccccuucugccugca caggcagaaguggggcugaca caggcagaaguggggcugacagggcagaggguugcgcccccucaccaccccuucugccugca chr16:15134075..15134137:-
chr22_3726 -6.4 0.00 ± 0.00 TRUE 3 3 0 0 no hsa-miR-1306-5p blast ccaccuccccugcaaacgucc acguuggcucugguggugaug ccaccuccccugcaaacguccaguggugcagagguaauggacguuggcucugguggugaug chr22:20086071..20086132:+
chr19_3408 -6.5 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-181d-5p blast aacauucauuguugucgguggguu cccaccgggggaugaaugucac aacauucauuguugucgguggguugugaggacugaggccagacccaccgggggaugaaugucac chr19:13874909..13874973:+
chr19_3406 -6.5 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-181c-5p blast aacauucaaccugucggugagu ccaucgaccguugaguggacc aacauucaaccugucggugaguuugggcagcucaggcaaaccaucgaccguugaguggacc chr19:13874724..13874785:+
chr2_677 -6.9 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-4440 blast ugucguggggcuugcuggc caguggggcuugcuggcu ugucguggggcuugcuggcuugcaccgugacucccucucacccagcaagugcaguggggcuugcuggcu chr2:239069320..239069389:-
chr22_3756 -6.9 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-12114 blast cagguggaggugugagguccugg aggaccuuggacauccacuuucu cagguggaggugugagguccuggggcaucauggcaggaccuuggacauccacuuucu chr22:50407455..50407512:+
chr7_1643 -7.0 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-148a-3p blast ucagugcacuacagaacuuug gaggcuguggucgccgaug ucagugcacuacagaacuuugucucuagaggcuguggucgccgaug chr7:25949897..25949943:-
chr14_2767 -7.0 0.00 ± 0.00 TRUE 3 3 0 0 no hsa-miR-345-5p blast gcugacuccuaguccagggcucg agucuaaguagaauguuaagcag agucuaaguagaauguuaagcagagacccaaacccuaggucugcugacuccuaguccagggcucg chr14:100307833..100307898:+
chr19_3396 -7.3 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-4748 blast gagguuuggggaggauuugc agacccuacccaaccccac gagguuuggggaggauuugcuggugcuagagaggaaagcagacccuacccaaccccac chr19:10780262..10780320:+
chr2_679 -7.3 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-4440 blast ugucguggggcuugcuggc uggcuugcaccgugacucacu uggcuugcaccgugacucacucucacuaagcaagugucguggggcuugcuggc chr2:239069419..239069472:-
chr4_991 -7.4 0.00 ± 0.00 TRUE 4 4 0 0 yes hsa-miR-576-5p blast auucuaauuucuccacgucuuu aguaacugcaccauuuuacaaucc aguaacugcaccauuuuacaauccaacgaggauucuaauuucuccacgucuuu chr4:109488681..109488734:+
chr2_678 -7.4 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-4440 blast ugucguggggcuugcuggc uggcuugcaccgugacucacu uggcuugcaccgugacucacucucacuaagcaagugucguggggcuugcuggc chr2:239069370..239069423:-
chr20_3637 -7.5 0.00 ± 0.00 STAR 4 4 0 0 no hsa-miR-1972 blast ugagguaguaguuugugucuu ggccaggcacaguggcucacg ugagguaguaguuugugucuuucaagaaauugguucaggccaggcacaguggcucacg chr20:56031224..56031282:-
chr19_3432 -7.6 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-3190-3p blast aagguagacggccagagaggug gcuuaacgaccucuauuuucc aagguagacggccagagaggugaccccggggguggucaggcuuaacgaccucuauuuucc chr19:47226992..47227052:+
chr6_1422 -7.7 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-3691-5p blast uaguggaugauggagacucgg gcuucuccuuccugcu gcuucuccuuccugcuuuuacguuucagugaauauugaggcacuggguaguggaugauggagacucgg chr6:5148288..5148356:-
chr6_1470 -7.8 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-6873-5p blast agcagagggaauacagagggca cccuugggaugaccaccucuccuuu cccuugggaugaccaccucuccuuuaggaccccagcagagggaauacagagggca chr6:33287264..33287319:-
chr2_457 -8.4 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-3679-5p blast ugaggauauggcagggaagggg ccuuuccuguaauuuuuuagagcacc ccuuuccuguaauuuuuuagagcaccuaguuagaggccccacguggugaggauauggcagggaagggg chr2:134127083..134127151:+
chr6_1465 -8.5 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-6721-5p blast ugggcaggggcuuauuguaggag ccugcuuuaacccuuccccagg ugggcaggggcuuauuguaggagucucugaagagagcuguggacugaccugcuuuaacccuuccccagg chr6:32170037..32170106:-
chr4_943 -8.9 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-218-5p blast uugugcuugaucuaaccau gguugguguagugauaauguagcg gguugguguagugauaauguagcgagauuuucuguugugcuugaucuaaccau chr4:20528264..20528317:+
chrX_3971 -1.0e+1 0.00 ± 0.00 TRUE 71 71 0 0 no hsa-miR-92a-3p blast uauugcacuugucccggccugu aagccguaaguucugauauu uauugcacuugucccggccuguggaagaaaggaggauuuuuaucgucuucuuauuuuaacuuuuaaaagccguaaguucugauauu chrX:134169479..134169565:-
chr11_2301 -1.1e+1 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-610 blast ugagcuaaaugugugcuggga uuacauauuagcccuucacu uuacauauuagcccuucacucccaacuauuugucuauuugucuuaggugagcuaaaugugugcuggga chr11:28056782..28056850:+
chr11_2484 -1.1e+1 0.00 ± 0.00 TRUE 56681 56681 0 0 no hsa-let-7a-5p blast ugagguaguagguuguauag guaauuucccugcuuaagaa guaauuucccugcuuaagaaaugguaguuuuccagccauugugacugcaugcucccagguugagguaguagguuguauag chr11:122146569..122146649:-
chr13_2661 -1.1e+1 0.00 ± 0.00 TRUE 141 141 0 0 no hsa-miR-17-5p blast caaagugcuuacagugcagguag ccuuguaaaacugaagauugugac ccuuguaaaacugaagauugugaccagucagaauaaugucaaagugcuuacagugcagguag chr13:91350578..91350640:+
chr9_2052 -1.2e+1 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-873-5p blast gcaggaacuugugagucu gcuuagaauaaguuugugugc gcuuagaauaaguuugugugcauuugcaggaacuugugagucu chr9:28888927..28888970:-
chr9_2048 -2.1e+1 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-31-5p blast aggcaagaugcuggcauagc ugaagagucauaguauucucc ugaagagucauaguauucuccuguaacuuggaacuggagaggaggcaagaugcuggcauagc chr9:21512158..21512220:-


mature miRBase miRNAs not detected by miRDeep2


miRBase precursor idClicking this field will display a pdf of the structure and read signature of the miRNA. total read countthis is the sum of read counts for the mature and star miRNAs. mature read count(s)this is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the mature miRNA, including 2 nts upstream and 5 nts downstream. If more than one mature sequence is given this will be a comma separated list. In parenthesis are normalized read counts shown. star read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the star miRNA, including 2 nts upstream and 5 nts downstream. This field is empty unless a reference star miRNA was given as input to quantifier.pl. If more than one mature sequence is given this will be a comman separated list remaining readsthis is the number of reads that did not map to any of the mature and star sequences UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the miRNA precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the miRNA precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). miRBase mature sequence(s)this is/are the mature miRNA sequence(s) input to quantifier.pl. miRBase star sequence(s)this is/are the star miRNA sequence(s) input to quantifier.pl. This field is empty unless a reference star miRNA was given as input to quantifier.pl. miRBase precursor sequencethis is the precursor miRNA sequence input to quantifier.pl.
hsa-mir-451a 309 304
0
 5 - blast
aaaccguuaccauuacugaguu
-
cuugggaauggcaaggaaaccguuaccauuacugaguuuaguaaugguaaugguucucuugcuauacccaga
hsa-mir-425 80 80
0
 0 - blast
aucgggaaugucguguccgccc
aaugacacgaucacucccguuga
-
gaaagcgcuuuggaaugacacgaucacucccguugagugggcacccgagaagccaucgggaaugucguguccgcccagugcucuuuc
hsa-mir-1255b-2 44 44
0
 0 - blast
aaccacuuucuuugcucaucca
cggaugagcaaagaaagugguu
-
ucuuacggaugagcaaagaaagugguuugcgccucaagaaaccacuuucuuugcucauccauaagga
hsa-mir-320d-2 17 17
0
 0 - blast
aaaagcuggguugagagga
-
uaucaauaagccuucucuucccaguucuucuuggagucaggaaaagcuggguugagaggagcagaaaagaaa
hsa-mir-3960 56 14
0
 42 - blast
ggcggcggcggaggcggggg
-
ggcgccccggcuccccgcgcccccgaucggggccgccgcuaguaguggcggcggcggaggcgggggcagcggcggcggcggcggaggcgcc
hsa-mir-1290 13 13
0
 0 - blast
uggauuuuuggaucaggga
-
gagcgucacguugacacucaaaaaguuucagauuuuggaacauuucggauuuuggauuuuuggaucagggaugcucaa
hsa-mir-99b 8 8
0
 0 - blast
cacccguagaaccgaccuugcg
caagcucgugucuguggguccg
-
ggcacccacccguagaaccgaccuugcggggccuucgccgcacacaagcucgugucuguggguccguguc
hsa-mir-1224 6 6
0
 0 - blast
ccccaccuccucucuccucag
gugaggacucgggaggugg
-
gugaggacucgggagguggaggguggugccgccggggccgggcgcuguuucagcucgcuucuccccccaccuccucucuccucag
hsa-mir-1246 6 6
0
 0 - blast
aauggauuuuuggagcagg
-
uguauccuugaauggauuuuuggagcaggaguggacaccugacccaaaggaaaucaauccauaggcuagcaau
hsa-mir-378a 5 5
0
 0 - blast
cuccugacuccagguccugugu
acuggacuuggagucagaaggc
-
agggcuccugacuccagguccuguguguuaccuagaaauagcacuggacuuggagucagaaggccu
hsa-mir-941-5 5 5
0
 0 - blast
cacccggcugugugcacaugugc
-
ugugcacaugugcccagggcccgggacagcgccacggaagaggacgcacccggcugugugcacaugugccca
hsa-mir-1299 5 5
0
 0 - blast
uucuggaauucugugugaggga
-
ccucauggcaguguucuggaauccuacgugagggacaaucauucagacccacguagcaguguucuggaauucugugugaggga
hsa-mir-3613 4 4
0
 0 - blast
acaaaaaaaaaagcccaacccuuc
uguuguacuuuuuuuuuuguuc
-
ugguuggguuuggauuguuguacuuuuuuuuuuguucguugcauuuuuaggaacaaaaaaaaaagcccaacccuucacaccacuuca
hsa-mir-6818 4 4
0
 0 - blast
uugugugaguacagagagcauc
uugucucuuguuccucacacag
-
cuauuuugugugaguacagagagcaucugaauggguacaguuguugucucuuguuccucacacag
hsa-mir-106a 4 4
0
 0 - blast
cugcaauguaagcacuucuuac
aaaagugcuuacagugcagguag
-
ccuuggccauguaaaagugcuuacagugcagguagcuuuuugagaucuacugcaauguaagcacuucuuacauuaccaugg
hsa-mir-1285-2 4 4
0
 0 - blast
ucugggcaacaaagugagaccu
-
uuugggaggccgaggcuggugcaucacuugagcccagcaauuugagaccaaucugggcaacaaagugagaccuccgucucuacaaaga
hsa-mir-6735 4 4
0
 0 - blast
aggccuguggcuccucccucag
cagggcagagggcacaggaaucuga
-
gcagccagggcagagggcacaggaaucugaggugacuggcacagaagacucaggccuguggcuccucccucag
hsa-mir-4433b 3 3
0
 0 - blast
caggaguggggggugggacgu
augucccacccccacuccugu
-
uguguucccuauccuccuuaugucccacccccacuccuguuugaauauuucaccagaaacaggaguggggggugggacguaaggaggaugggggaaagaaca
hsa-mir-6738 3 3
0
 0 - blast
cgagggguagaagagcacagggg
cuucugccugcauucuacucccag
-
gaaggcgagggguagaagagcacagggguucugauaaacccuucugccugcauucuacucccag
hsa-mir-200b 2 2
0
 0 - blast
caucuuacugggcagcauugga
uaauacugccugguaaugauga
-
ccagcucgggcagccguggccaucuuacugggcagcauuggauggagucaggucucuaauacugccugguaaugaugacggcggagcccugcacg
hsa-mir-6884 2 2
0
 0 - blast
cccaucaccuuuccgucuccccu
agaggcugagaaggugauguug
-
cccgcagaggcugagaaggugauguuggcucaagaaagggagauagaugguagcccaucaccuuuccgucuccccuag
hsa-mir-12136 21 2
0
 19 - blast
gaaaaagucauggaggcc
-
gaaaaagucauggaggccaugggguuggcuugaaaccagcuuugggggguucgauuccuuccuuuuuuguc
hsa-mir-10527 2 2
0
 0 - blast
aaagcaaauguugggugaacggc
-
aaagcaaauguugggugaacggcuguuuccucuuauucaagccaugcaccuuacucuugcuggua
hsa-mir-6826 2 2
0
 0 - blast
cuccccucucuuuccuguucag
ucaauaggaaagaggugggaccu
-
cuuggucaauaggaaagaggugggaccuccuggcuuuuccucugcagcauggcucggaccuagugcaauguuuaagcuccccucucuuuccuguucag
hsa-mir-548t 4 2
0
 2 - blast
aaaaaccacaauuacuuuugcacca
aaaaaccacaauuacuuuugcacca
aaaaaccacaauuacuuuu
caaaagugaucgugguuuuug
-
aggguggugcaaaagugaucgugguuuuugcaauuuuuuaaugacaaaaaccacaauuacuuuugcaccaaccu
hsa-mir-4429 2 2
0
 0 - blast
aaaagcugggcugagaggcg
-
agggagaaaagcugggcugagaggcgacuggugucuaauuuguuugucucuccaacucagacugccuggccca
hsa-mir-548j 4 4
0
 0 - blast
aaaaguaauugcggucuuu
aaaaguaauugcggucuuuggu
caaaaacugcauuacuuuugc
-
gggcagccagugaauaguuagcuggugcaaaaguaauugcggucuuugguauuacuuucaguggcaaaaacugcauuacuuuugcaccagccuacuagaacgcugaguucag
hsa-mir-11400 2 2
0
 0 - blast
ucggcuguguaucucuguguc
-
caagggcgacucggcuguguaucucugugucagaagcuuagccacaguguggcacagucguguccuuccugcucaca
hsa-mir-548q 2 2
0
 0 - blast
gcuggugcaaaaguaauggcgg
-
auauuaggcuggugcaaaaguaauggcgguuuuugccauuacuuuucauuuuuaccauuaaaaguaauggcaaaaagcaugauuacuuuuucaccaaccu
hsa-mir-616 2 2
0
 0 - blast
agucauuggaggguuugagcag
acucaaaacccuucagugacuu
-
uuagguaauuccuccacucaaaacccuucagugacuuccaugacaugaaauaggaagucauuggaggguuugagcagaggaaugaccuguuuuaaaa
hsa-mir-6852 2 2
0
 0 - blast
cccugggguucugaggacaug
uguccucuguuccucag
-
ugcugcccugggguucugaggacaugcucugacuccccugauguccucuguuccucaggugcuggg
hsa-mir-1277 2 2
0
 0 - blast
aaauauauauauauauguacguau
uacguagauauauauguauuuu
-
accucccaaauauauauauauauguacguauguguauauaaauguauacguagauauauauguauuuuugguggguuu
hsa-mir-6780a 1 1
0
 0 - blast
cuccucuguuuucuuuccuag
uugggagggaagacagcuggaga
-
gacacuugggagggaagacagcuggagaguauggucacagcagcauccuccucuguuuucuuuccuag
hsa-mir-4516 1 1
0
 0 - blast
gggagaagggucggggc
-
agggagaagggucggggcagggagggcagggcaggcucugggguggggggucugugagucagccacggcucugcccacgucucccc
hsa-mir-548d-2 7 4
0
 3 - blast
aaaaguaauugugguuuuug
aaaaguaauugugguuuuugc
caaaaaccacaguuucuuuugc
aaaaguaauugugguuuuugcc
aaaaguaauugugguuuuug
-
gagagggaagauuuagguuggugcaaaaguaauugugguuuuugccauugaaaguaauggcaaaaaccacaguuucuuuugcaccaaccuaauaaaa
hsa-mir-5187 1 1
0
 0 - blast
ugggaugagggauugaagugga
acugaauccucuuuuccucag
-
gacuaagggugggaugagggauugaaguggagcaggaaugcgcuuuucuccacugaauccucuuuuccucaggugg
hsa-mir-320e 1 1
0
 0 - blast
aaagcuggguugagaagg
-
cuccauggggccuucucuucccaguucuuccuggagucggggaaaagcuggguugagaaggugaaaagaaaaa
hsa-mir-3614 1 1
0
 0 - blast
ccacuuggaucugaaggcugccc
uagccuucagaucuugguguuuu
-
gguucugucuugggccacuuggaucugaaggcugccccuuugcucucugggguagccuucagaucuugguguuuugaauucuuacu
hsa-mir-6825 1 1
0
 0 - blast
uggggagguguggagucagcau
gcgcugacccgccuucuccgca
-
gggcauggggagguguggagucagcauggggcuaggaggccccgcgcugacccgccuucuccgcag
hsa-mir-3154 1 1
0
 0 - blast
cagaaggggaguugggagcaga
-
ggccccuccuucucagccccagcucccgcucaccccugccacgucaaaggaggcagaaggggaguugggagcagagaggggacc
hsa-mir-1303 1 1
0
 0 - blast
uuuagagacggggucuugcucu
-
ggcugggcaacauagcgagaccucaacucuacaauuuuuuuuuuuuuaaauuuuagagacggggucuugcucuguugccaggcuuu
hsa-mir-4804 1 1
0
 0 - blast
uuggacgguaagguuaagcaa
ugcuuaaccuugcccucgaaa
-
ucaguguauuuggacgguaagguuaagcaaggugcgucguaucuugcuuaaccuugcccucgaaauacacuga
hsa-mir-6891 1 1
0
 0 - blast
uaaggagggggaugagggg
cccucaucuuccccuccuuuc
-
guaaggagggggaugaggggucauaucucuucucagggaaagcaggagcccuucagcagggucagggccccucaucuuccccuccuuucccag
hsa-mir-6130 1 1
0
 0 - blast
ugagggaguggauuguaug
-
caaugaauguggaaaugcaggcaucccuucuauauacugauguaauuuuccuuggauuuauaugcaguacugagggaguggauuguaugguaguucuauuuuuacauuu
hsa-mir-200a 1 1
0
 0 - blast
uaacacugucugguaacgaugu
caucuuaccggacagugcugga
-
ccgggccccugugagcaucuuaccggacagugcuggauuucccagcuugacucuaacacugucugguaacgauguucaaaggugacccgc
hsa-mir-3615 1 1
0
 0 - blast
ucucucggcuccucgcggcuc
-
gacucugggacgcucagacgccgcgcggggcggggauuggucugugguccucucucggcuccucgcggcucgcggcggccgacgguu
hsa-mir-6859-4 1 1
0
 0 - blast
ugacccccaugucgccucuguag
gagaggaacaugggcucaggaca
-
ugugggagaggaacaugggcucaggacagcgggugucagcuugccugacccccaugucgccucuguag
hsa-mir-548ad 5 2
0
 3 - blast
aaaaguaauugugguuuuug
gaaaacgacaaugacuuuugca
aaaaguaauugugguuuuug
-
cuguuagguuggugcaaaaguaauugugguuuuugaaaguaacuuggcgaaaacgacaaugacuuuugcaccaaucuaauac
hsa-mir-219b 1 0
0
 1 - blast
agaauugcguuuggacaaucagu
agauguccagccacaauucucg
-
ggagcucagccacagauguccagccacaauucucgguuggccgcagacucguacaagaauugcguuuggacaaucaguggcgaagccc
hsa-mir-558 2 0
0
 2 - blast
ugagcugcuguaccaaaau
-
gugugugugugugugugugguuauuuugguauaguagcucuagacucuauuauaguuuccugagcugcuguaccaaaauaccacaaacgggcug
hsa-mir-19b-1 2 2
0
 0 - blast
ugugcaaauccaugcaaaacuga
aguuuugcagguuugcauccagc
-
cacuguucuaugguuaguuuugcagguuugcauccagcugugugauauucugcugugcaaauccaugcaaaacugacugugguagug
hsa-mir-1273c 2 0
0
 2 - blast
ggcgacaaaacgagacccuguc
-
ugcagccugggcgacaaaacgagacccugucuuuuuuuuuuucugagacagagucucguucuguugcccaagcugga
hsa-mir-519c 6 6
0
 0 - blast
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
aaagugcaucuuuuuagaggau
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
-
ucucagccugugacccucuagagggaagcgcuuucuguugucugaaagaaaagaaagugcaucuuuuuagaggauuacaguuugaga
hsa-mir-500b 1 0
0
 1 - blast
aauccuugcuaccugggu
gcacccaggcaaggauucug
uaauccuugcuaccugggugaga
-
cccccucucuaauccuugcuaccugggugagagugcuuucugaaugcagugcacccaggcaaggauucugcaaggggga
hsa-mir-7108 1 0
0
 1 - blast
guguggccggcaggcgggugg
acccgcccgucuccccacag
-
guguggccggcaggcgggugggcgggggcggccggugggaaccccgccccgccccgcgcccgcacucacccgcccgucuccccacag
hsa-mir-1285-1 4 4
0
 0 - blast
ucugggcaacaaagugagaccu
gaucucacuuuguugcccagg
-
uguagagauaggaucucacuuuguugcccaggcuggucucaaacuccuggucugggcaacaaagugagaccuuaucucuacaag
hsa-mir-548ay 6 3
0
 3 - blast
aaaaguaauugugguuuuug
aaaaguaauugugguuuuug
aaaaguaauugugguuuuugc
caaaaccgcgauuacucuugca
-
agaagaugcuuacuacuagguuggugcaaaaguaauugugguuuuugcauuuaaaguaauggccaaaaccgcgauuacucuugcacgaaccuaacgguaacacuucu
hsa-mir-548ae-2 4 2
0
 2 - blast
aaaaguaauugugguuuuug
caaaaacugcaauuacuuuca
aaaaguaauugugguuuuug
-
ugugcaaaaguaauugugguuuuugucauuuaaaaguaauggcaaaaacugcaauuacuuucacacc
hsa-mir-8485 12 0
0
 12 - blast
cacacacacacacacacguau
-
ucugugauauacguguguguguguguguauauagcauauguguauacauacacacacacacacacacacacacacacacacacacacguau
hsa-mir-501 1 0
0
 1 - blast
aaugcacccgggcaaggauucu
aauccuuugucccugggugaga
-
gcucuuccucucuaauccuuugucccugggugagagugcuuucugaaugcaaugcacccgggcaaggauucugagagggugagc
hsa-mir-518e 6 6
0
 0 - blast
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
aaagcgcuucccuucagagug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
-
ucucaggcugugacccucuagagggaagcgcuuucuguuggcuaaaagaaaagaaagcgcuucccuucagaguguuaacgcuuugaga
hsa-mir-3665 8 0
0
 8 - blast
agcaggugcggggcggcg
-
gcgggcggcggcggcggcagcagcagcaggugcggggcggcggccgcgcuggccgcucgacuccgcagcugcucguucugcuucuccagcuugcgcaccagcucc
hsa-mir-548h-3 2 0
0
 2 - blast
caaaaacugcaauuacuuuugc
aaaaguaaucgcgguuuuuguc
-
ucugauucugcauguauuagguuggugcaaaaguaaucgcgguuuuugucauugaaaguaauagcaaaaacugcaauuacuuuugcaccaaccuaaaaguagucacugucuucagaua
hsa-mir-3149 2 0
0
 2 - blast
uuuguauggauauguguguguau
-
auacauacauguacacacacaugucauccacacacauacauauauauauguuuguauggauauguguguguauguguguguau
hsa-mir-522 6 6
0
 0 - blast
cucuagagggaagcgcuuucug
aaaaugguucccuuuagagugu
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
cucuagagggaagcgcuuucug
-
ucucaggcugugucccucuagagggaagcgcuuucuguugucugaaagaaaagaaaaugguucccuuuagaguguuacgcuuugaga