miRDeep2

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Parameters used


miRDeep2 version2.0.1.2
Program call/usr/local/bin/miRDeep2.pl HCM-8_collapsed.fa GRCh38.primary_assembly.genome.fa_clean.fa.fasta HCM-8_reads_collapsed_vs_GRCh38.primary_assembly.genome.fa_genome.arf mature.fa_igenome.fa_idx.fa none hairpin.fa_igenome.fa_idx.fa
ReadsHCM-8_collapsed.fa
GenomeGRCh38.primary_assembly.genome.fa_clean.fa.fasta
MappingsHCM-8_reads_collapsed_vs_GRCh38.primary_assembly.genome.fa_genome.arf
Reference mature miRNAsmature.fa_igenome.fa_idx.fa
Other mature miRNAsnone


Survey of miRDeep2 performance for score cut-offs -10 to 10
novel miRNAsknown miRBase miRNAs
miRDeep2 scorefor details on how the log-odds score is calculated, see Friedlander et al., Nature Biotechnology, 2008. predicted by miRDeep2novel miRNA hairpins are here defined by not having any of the reference mature miRNAs mapping perfectly (full length, no mismatches). The numbers show how many novel miRNA hairpins have a score equal to or exceeding the cut-off. estimated false positivesnumber of false positive miRNA hairpins predicted at this cut-off, as estimated by the miRDeep2 controls (see Friedlander et al., Nature Biotechnology, 2008). Mean and standard deviation is estimated from 100 rounds of permuted controls. estimated true positivesthe number of true positive miRNA hairpins is estimated as t = total novel miRNAs - false positive novel miRNAs. The percentage of the predicted novel miRNAs that is estimated to be true positives is calculated as p = t / total novel miRNAs. The number of false positives is estimated from 100 rounds of permuted controls. In each of the 100 rounds, t and p are calculated, generating mean and standard deviation of t and p. The variable p can be used as an estimation of miRDeep2 positive predictive value at the score cut-off. in speciesnumber of reference mature miRNAs for that species given as input to miRDeep2. in datanumber of reference mature miRNAs for that species that map perfectly (full length, no mismatches) to one or more of precursor candidates that have been excised from the genome by miRDeep2. detected by miRDeep2number of reference mature miRNAs for that species that map perfectly (full length, no mismatches) to one or more of predicted miRNA hairpins that have a score equal to or exceeding the cut-off. The percentage of reference mature miRNAs in data that is detected by miRDeep2 is calculated as s = reference mature miRNAs detected / reference mature miRNAs in data. s can be used as an estimation of miRDeep2 sensitivity at the score cut-off. estimated signal-to-noisefor the given score cut-off, the signal-to-noise ratio is estimated as r = total miRNA hairpins reported / mean estimated false positive miRNA hairpins over 100 rounds of permuted controls. excision gearingthis is the minimum read stack height required for excising a potential miRNA precursor from the genome in this analysis.
1000 ± 00 ± 0 (0 ± 0%)265645443 (9%)38.61
900 ± 00 ± 0 (0 ± 0%)265645447 (10%)41.41
800 ± 00 ± 0 (0 ± 0%)265645450 (11%)40.31
700 ± 00 ± 0 (0 ± 0%)265645452 (11%)41.91
600 ± 00 ± 0 (0 ± 0%)265645452 (11%)40.61
500 ± 00 ± 0 (0 ± 0%)265645454 (12%)38.61
400 ± 00 ± 0 (0 ± 0%)265645456 (12%)37.71
300 ± 00 ± 0 (0 ± 0%)265645463 (14%)22.51
221 ± 11 ± 1 (73 ± 35%)2656454177 (39%)9.21
134 ± 21 ± 1 (17 ± 27%)2656454224 (49%)61
0315 ± 40 ± 0 (0 ± 0%)2656454239 (53%)31
-1519 ± 40 ± 0 (0 ± 0%)2656454264 (58%)2.71
-21828 ± 50 ± 0 (0 ± 2%)2656454321 (71%)2.81
-34148 ± 71 ± 2 (1 ± 4%)2656454375 (83%)2.61
-46096 ± 80 ± 0 (0 ± 0%)2656454403 (89%)1.91
-568170 ± 100 ± 0 (0 ± 0%)2656454410 (90%)1.31
-680205 ± 110 ± 0 (0 ± 0%)2656454412 (91%)1.21
-7101230 ± 110 ± 0 (0 ± 0%)2656454423 (93%)1.21
-8127246 ± 110 ± 0 (0 ± 0%)2656454429 (94%)1.21
-9139258 ± 110 ± 0 (0 ± 0%)2656454429 (94%)1.21
-10157268 ± 110 ± 0 (0 ± 0%)2656454429 (94%)1.21





novel miRNAs predicted by miRDeep2


provisional idthis is a provisional miRNA name assigned by miRDeep2. The first part of the id designates the chromosome or genome contig on which the miRNA gene is located. The second part is a running number that is added to avoid identical ids. The running number is incremented by one for each potential miRNA precursor that is excised from the genome. Clicking this field will display a pdf of the structure, read signature and score breakdown of the reported miRNA. miRDeep2 scorethe log-odds score assigned to the hairpin by miRDeep2 estimated probability that the miRNA candidate is a true positivethe estimated probability that a predicted novel miRNA with a score of this or higher is a true positive. To see exactly how this probability is estimated, mouse over the 'novel miRNAs, true positives' in the table at the top of the webpage. rfam alertthis field indicates if the predicted miRNA hairpin has sequence similarity to reference rRNAs or tRNAs. Warnings in this field should overrule the estimated probability that a reported miRNA is a true positive (previous field). total read countthis is the sum of read counts for the predicted mature, loop and star miRNAs. mature read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted mature miRNA, including 2 nts upstream and 5 nts downstream. loop read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted miRNA loop, including 2 nts upstream and 5 nts downstream. star read countthis is the number of reads that map to the predicted miRNA hairpin and are contained in the sequence covered by the predicted star miRNA, including 2 nts upstream and 5 nts downstream. significant randfold p-valuethis field indicates if the estimated randfold p-value of the excised potential miRNA hairpin is equal to or lower than 0.05 (see Bonnet et al., Bioinformatics, 2004). miRBase miRNAthis field displays the ids of any reference mature miRNAs for the species that map perfectly (full length, no mismatches) to the reported miRNA hairpin. If this is the case, the reported miRNA hairpin is assigned as a known miRNA. If not, it is assigned as a novel miRNA. If more than one reference mature miRNA maps to the miRNA hairpin, then only the id of the reference miRBase miRNA that matches the predicted mature sequence is output. example miRBase miRNA with the same seedthis field displays the ids of any reference mature miRNAs from related species that have a seed sequence identical to that of the reported mature miRNA. The seed is here defined as nucleotides 2-8 from the 5' end of the mature miRNA. If more than one reference mature miRNA have identical seed, then only the id of the miRNA that occurs last in the input file of reference mature miRNAs from related species is displayed. UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the consensus precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the consensus precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). consensus mature sequencethis is the consensus mature miRNA sequence as inferred from the deep sequencing reads. consensus star sequencethis is the consensus star miRNA sequence as inferred from the deep sequencing reads. consensus precursor sequencethis is the consensus precursor miRNA sequence as inferred from the deep sequencing reads. Note that this is the inferred Drosha hairpin product, and therefore does not include substantial flanking genomic sequence as does most miRBase precursors. precursor coordinateThe given precursor coordinates refer do absolute position in the mapped reference sequence
chr22_2684 2.8 0.73 ± 0.35 18 18 0 0 yes blast uugaggucggacaugguggcu ccaccacgccuggccuaagagu ccaccacgccuggccuaagaguguguuucuuaaagguaaagacuugaggucggacaugguggcu chr22:40956704..40956768:-
chr22_2663 2.1 0.73 ± 0.35 38 38 0 0 yes blast gaugccugggaguugcgaucugc aggucgcccucaaggugaccc aggucgcccucaaggugacccgccuacuuugcgggaugccugggaguugcgaucugc chr22:42615333..42615390:+
chr10_1538 1.6 0.17 ± 0.27 11 11 0 0 yes blast aggugggaggcaaguggcu ugggcugugugcaucuga ugggcugugugcaucugaauugcagguugaauccaacaacaucagugaggugggaggcaaguggcu chr10:77311979..77312045:-



mature miRBase miRNAs detected by miRDeep2


tag idthis is a tag id assigned by miRDeep2. The first part of the id designates the chromosome or genome contig on which the miRNA gene is located. The second part is a running number that is added to avoid identical ids. The running number is incremented by one for each potential miRNA precursor that is excised from the genome. Clicking this field will display a pdf of the structure, read signature and score breakdown of the miRNA. miRDeep2 scorethe log-odds score assigned to the hairpin by miRDeep2 estimated probability that the miRNA is a true positivethe estimated probability that a predicted miRNA with a score of this or higher is a true positive. To see exactly how this probability is estimated, mouse over the 'novel miRNAs, true positives' in the table at the top of the webpage. For miRBase miRNAs, this reflects the support that the data at hand lends to the miRNA. rfam alertthis field indicates if the miRNA hairpin has sequence similarity to reference rRNAs or tRNAs. Warnings in this field should overrule the estimated probability that a reported miRNA is a true positive (previous field). predicted mature seq. in accordance with miRBase mature seq.If the predicted miRDeep2 sequence overlaps with the miRBase annotated mature sequence than this is indicated by 'TRUE'. If the predicted miRDeep2 star sequence overlaps with the miRBase annotated mature sequence this is inidicated by 'STAR'. total read countthis is the sum of read counts for the mature, loop and star miRNAs. mature read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the consensus mature miRNA, including 2 nts upstream and 5 nts downstream. loop read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the consensus miRNA loop, including 2 nts upstream and 5 nts downstream. star read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the consensus star miRNA, including 2 nts upstream and 5 nts downstream. significant randfold p-valuethis field indicates if the estimated randfold p-value of the miRNA hairpin is equal to or lower than 0.05 (see Bonnet et al., Bioinformatics, 2004). mature miRBase miRNAthis field displays the ids of any reference mature miRNAs for the species that map perfectly (full length, no mismatches) to the reported miRNA hairpin. If this is the case, the reported miRNA hairpin is assigned as a known miRNA. If not, it is assigned as a novel miRNA. If more than one reference mature miRNA maps to the miRNA hairpin, then only the id of the reference miRBase miRNA that matches the predicted mature sequence is output. example miRBase miRNA with the same seedthis field displays the ids of any reference mature miRNAs from related species that have a seed sequence identical to that of the reported mature miRNA. The seed is here defined as nucleotides 2-8 from the 5' end of the mature miRNA. If more than one reference mature miRNA have identical seed, then only the id of the miRNA that occurs last in the input file of reference mature miRNAs from related species is displayed. UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the consensus precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the consensus precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). consensus mature sequencethis is the consensus mature miRNA sequence as inferred from the deep sequencing reads. consensus star sequencethis is the consensus star miRNA sequence as inferred from the deep sequencing reads. consensus precursor sequencethis is the consensus precursor miRNA sequence as inferred from the deep sequencing reads. Note that this is the inferred Drosha hairpin product, and therefore does not include substantial flanking genomic sequence as does most miRBase precursors. precursor coordinateThe given precursor coordinates refer do absolute position in the mapped reference sequence
chr3_526 6.0e+4 0.00 ± 0.00 TRUE 118744 118743 0 1 yes hsa-miR-16-5p blast uagcagcacguaaauauuggcg accaauauuacugugcugcu uagcagcacguaaauauuggcguagugaaauauauauuaaacaccaauauuacugugcugcu chr3:160404753..160404815:+
chr8_1291 7.3e+3 0.00 ± 0.00 TRUE 14505 14416 0 89 yes hsa-miR-486-5p blast uccuguacugagcugccccgag cggggcagcucaguacagga uccuguacugagcugccccgaggcccuucaugcugcccagcucggggcagcucaguacagga chr8:41660443..41660505:-
chr8_1228 7.3e+3 0.00 ± 0.00 TRUE 14491 14409 0 82 yes hsa-miR-486-5p blast uccuguacugagcugccccgag cggggcagcucaguacagga uccuguacugagcugccccgagcugggcagcaugaagggccucggggcagcucaguacagga chr8:41660443..41660505:+
chr9_1385 3.9e+3 0.00 ± 0.00 STAR 7649 6058 0 1591 yes hsa-miR-126-5p blast cguaccgugaguaauaaugcg cauuauuacuuuugguacgcg cauuauuacuuuugguacgcgcugugacacuucaaacucguaccgugaguaauaaugcg chr9:136670615..136670674:+
chr7_1185 3.3e+3 0.00 ± 0.00 TRUE 6498 6494 0 4 yes hsa-miR-93-5p blast caaagugcuguucgugcaggu acugcugagcuagcacuucccg caaagugcuguucgugcagguagugugauuacccaaccuacugcugagcuagcacuucccg chr7:100093776..100093837:-
chr17_2246 3.0e+3 0.00 ± 0.00 TRUE 5937 5928 0 9 yes hsa-miR-423-5p blast ugaggggcagagagcgagacuuu agcucggucugaggcccc ugaggggcagagagcgagacuuuucuauuuuccaaaagcucggucugaggcccc chr17:30117094..30117148:+
chr8_1326 1.5e+3 0.00 ± 0.00 TRUE 3091 3014 0 77 yes hsa-miR-151b blast ucgaggagcucacagucuagu cuagacugaagcuccuugagg ucgaggagcucacagucuaguaugucucauccccuacuagacugaagcuccuugagg chr8:140732586..140732643:-
chr22_2648 1.1e+3 0.00 ± 0.00 TRUE 2316 2315 0 1 yes hsa-miR-185-5p blast uggagagaaaggcaguuccuga aggggcuggcuuuccucuggu uggagagaaaggcaguuccugaugguccccuccccaggggcuggcuuuccucuggu chr22:20033152..20033208:+
chr3_569 1.1e+3 0.00 ± 0.00 TRUE 2161 2157 0 4 yes hsa-miR-191-5p blast caacggaaucccaaaagcagcu gcugcgcuuggauuucguc caacggaaucccaaaagcagcuguugucuccagagcauuccagcugcgcuuggauuucguc chr3:49020633..49020694:-
chr1_28 1.0e+3 0.00 ± 0.00 TRUE 2117 2025 0 92 yes hsa-miR-30e-5p blast uguaaacauccuugacuggaagcu cuuucagucggauguuuacagc uguaaacauccuugacuggaagcuguaagguguucagaggagcuuucagucggauguuuacagc chr1:40754370..40754434:+
chr13_1890 1.8e+2 0.00 ± 0.00 TRUE 352 346 0 6 yes hsa-miR-20a-5p blast uaaagugcuuauagugcagguag cugcauuaugagcacuuaaagu uaaagugcuuauagugcagguaguguuuaguuaucuacugcauuaugagcacuuaaagu chr13:91351071..91351130:+
chr17_2321 1.1e+2 0.00 ± 0.00 TRUE 213 212 0 1 yes hsa-miR-4732-5p blast uguagagcagggagcaggaagcu gcccugaccuguccuguuc uguagagcagggagcaggaagcuguguguguccagcccugaccuguccuguuc chr17:28861669..28861722:-
chr14_1983 8.5e+1 0.00 ± 0.00 STAR 164 160 0 4 yes hsa-miR-342-5p blast ucucacacagaaaucgcacccguc aggggugcuaucugugauugaggg aggggugcuaucugugauugagggacaugguuaauggaauugucucacacagaaaucgcacccguc chr14:100109672..100109738:+
chr11_1719 8.2e+1 0.00 ± 0.00 TRUE 158 149 0 9 yes hsa-miR-139-5p blast ucuacagugcacgugucuccagu uggagacgcggcccuguuggagu ucuacagugcacgugucuccaguguggcucggaggcuggagacgcggcccuguuggagu chr11:72615065..72615124:-
chr13_1886 7.3e+1 0.00 ± 0.00 TRUE 142 117 0 25 yes hsa-miR-17-5p blast caaagugcuuacagugcagguag acugcagugaaggcacuugua caaagugcuuacagugcagguagugauaugugcaucuacugcagugaaggcacuugua chr13:91350617..91350675:+
chr7_1184 6.5e+1 0.00 ± 0.00 STAR 134 132 0 2 no hsa-miR-25-5p blast cauugcacuugucucggucuga aggcggagacuugggcaauug aggcggagacuugggcaauugcuggacgcugcccugggcauugcacuugucucggucuga chr7:100093570..100093630:-
chrX_2710 3.6e+1 0.00 ± 0.00 TRUE 71 69 0 2 yes hsa-miR-532-5p blast caugccuugaguguaggaccgu ccucccacacccaaggcuug caugccuugaguguaggaccguuggcaucuuaauuacccucccacacccaaggcuug chrX:50003166..50003223:+
chrX_2737 3.1e+1 0.00 ± 0.00 STAR 57 54 0 3 yes hsa-miR-652-5p blast aauggcgccacuaggguugug acaacccuaggagagggugcc acaacccuaggagagggugccauucacauagacuauaauugaauggcgccacuaggguugug chrX:110055347..110055409:+
chrX_2825 2.9e+1 0.00 ± 0.00 TRUE 54 37 0 17 yes hsa-miR-424-5p blast cagcagcaauucauguuuuga caaaacgugaggcgcugcua cagcagcaauucauguuuugaaguguucuaaaugguucaaaacgugaggcgcugcua chrX:134546644..134546701:-
chr9_1380 2.7e+1 0.00 ± 0.00 TRUE 51 41 0 10 yes hsa-miR-181a-5p blast aacauucaacgcugucggugagu accacugaccguugacugua aacauucaacgcugucggugaguuugggauuugaaaaaaccacugaccguugacugua chr9:124692479..124692537:+
chr16_2181 2.1e+1 0.00 ± 0.00 STAR 38 33 0 5 yes hsa-miR-140-5p blast uaccacaggguagaaccacgga cagugguuuuacccuaugguag cagugguuuuacccuaugguagguuacgucaugcuguucuaccacaggguagaaccacgga chr16:69933102..69933163:+
chr19_2507 1.0e+1 0.00 ± 0.00 TRUE 17 15 0 2 yes hsa-miR-150-5p blast ucucccaacccuuguaccagug cugguacaggccugggggaca ucucccaacccuuguaccagugcugggcucagacccugguacaggccugggggaca chr19:49500797..49500853:-
chr6_1027 9.5 0.00 ± 0.00 TRUE 17 16 0 1 yes hsa-miR-30c-5p blast uguaaacauccuacacucucagcu cugggagaaggcuguuuac uguaaacauccuacacucucagcuguggaaaguaagaaagcugggagaaggcuguuuac chr6:71376966..71377025:-
chr1_59 9.3 0.00 ± 0.00 STAR 15 13 0 2 yes hsa-miR-197-5p blast uucaccaccuucuccacccagc cggguagagagggcaguggga cggguagagagggcagugggagguaagagcucuucacccuucaccaccuucuccacccagc chr1:109598900..109598961:+
chr1_220 8.5 0.00 ± 0.00 STAR 14 9 0 5 yes hsa-miR-199a-5p blast acaguagucugcacauugguu cccaguguucagacuaccuguu cccaguguucagacuaccuguucaggacaaugccguuguacaguagucugcacauugguu chr1:172144554..172144614:-
chrX_2787 7.1 0.00 ± 0.00 TRUE 12 9 0 3 yes hsa-miR-374a-5p blast uuauaauacaaccugauaagug cuuaucagauuguauuguaa uuauaauacaaccugauaaguguuauagcacuuaucagauuguauuguaa chrX:74287296..74287346:-
chr1_66 5.2 0.00 ± 0.00 TRUE 6 4 0 2 yes hsa-miR-942-5p blast uucucuguuuuggccaugugug cacauggccgaaacagagaa uucucuguuuuggccauguguguacucacagccccucacacauggccgaaacagagaa chr1:117094656..117094714:+
chr3_554 4.9 0.00 ± 0.00 STAR 6 3 0 3 yes hsa-miR-885-5p blast aggcagcgggguguaguggau uccauuacacuacccugccucu uccauuacacuacccugccucuucuccaugagaggcagcgggguguaguggau chr3:10394499..10394552:-
chr19_2488 4.8 0.00 ± 0.00 STAR 14 9 0 5 no hsa-miR-199a-5p blast acaguagucugcacauugguu cccaguguucagacuaccuguu cccaguguucagacuaccuguucaggaggcucucaauguguacaguagucugcacauugguu chr19:10817429..10817491:-
chr14_1970 3.4 0.00 ± 0.00 TRUE 27 27 0 0 yes hsa-miR-625-5p blast agggggaaaguucuauagucc acuauagaacuuucccccuca agggggaaaguucuauaguccuguaauuagaucucaggacuauagaacuuucccccuca chr14:65471115..65471174:+
chr1_18 3.2 0.00 ± 0.00 STAR 3 2 0 1 yes hsa-miR-1976 blast cagcaaggaaggcaggggu ccuccugcccuccuugcuguaga cagcaaggaaggcagggguccuaagguguguccuccugcccuccuugcuguaga chr1:26554542..26554596:+
chr14_2035 3.2 0.00 ± 0.00 TRUE 27 27 0 0 yes hsa-miR-625-5p blast agggggaaaguucuauagucc acuauagaacuuucccccuca agggggaaaguucuauaguccugagaucuaauuacaggacuauagaacuuucccccuca chr14:65471113..65471172:-
chr9_1367 3.2 0.00 ± 0.00 STAR 3 2 0 1 yes hsa-miR-27b-5p blast uucacaguggcuaaguucugc agagcuuagcugauugguga agagcuuagcugauuggugaacagugauugguuuccgcuuuguucacaguggcuaaguucugc chr9:95085462..95085525:+
chr15_2107 3.1 0.00 ± 0.00 TRUE 142 142 0 0 yes hsa-miR-629-5p blast uggguuuacguugggagaacu uucucccaacguaagcccagc uggguuuacguugggagaacuuuuacggugaaccaggagguucucccaacguaagcccagc chr15:70079386..70079447:-
chr4_635 2.9 0.73 ± 0.35 TRUE 50 50 0 0 yes hsa-miR-574-5p blast ugagugugugugugugagugu gcucaugcacacacccaca ugagugugugugugugagugugugucgcuccggguccacgcucaugcacacacccaca chr4:38868055..38868113:+
chr5_821 2.9 0.73 ± 0.35 STAR 12 12 0 0 yes hsa-miR-378a-5p blast cuggacuuggagucagaagg uccugacuccagguccugug uccugacuccagguccuguguguuaccuagaaauagcacuggacuuggagucagaagg chr5:149732829..149732887:+
chr5_824 2.8 0.73 ± 0.35 TRUE 15 15 0 0 yes hsa-miR-1294 blast ugugagguuggcauuguugu aacagugccaaccucacagg ugugagguuggcauuguugucuggcauugucugauauacaacagugccaaccucacagg chr5:154347152..154347211:+
chr22_2670 2.7 0.73 ± 0.35 TRUE 35940 35940 0 0 yes hsa-let-7b-5p blast ugagguaguagguuguguggu uauacaaccuacugccuuccc ugagguaguagguugugugguuucagggcagugauguugccccucggaagauaacuauacaaccuacugccuuccc chr22:46113690..46113766:+
chr7_1074 2.7 0.73 ± 0.35 TRUE 21 21 0 0 yes hsa-miR-550a-3-5p blast agugccugagggaguaagagc ucuuacucccucaggcacauc agugccugagggaguaagagcccuguuguugucagauagugucuuacucccucaggcacauc chr7:32733001..32733063:+
chr17_2250 2.7 0.73 ± 0.35 TRUE 40 40 0 0 yes hsa-miR-193a-5p blast ugggucuuugcgggcgagauga aacuggccuacaaagucccagu ugggucuuugcgggcgagaugagggugucggaucaacuggccuacaaagucccagu chr17:31560015..31560071:+
chr3_480 2.7 0.73 ± 0.35 TRUE 1381 1381 0 0 yes hsa-miR-26a-5p blast uucaaguaauccaggauaggcu ccuauucuugguuacuugcacg uucaaguaauccaggauaggcugugcaggucccaaugggccuauucuugguuacuugcacg chr3:37969412..37969473:+
chr11_1668 2.7 0.73 ± 0.35 STAR 23 23 0 0 yes hsa-miR-210-5p blast cugugcgugugacagcggcu ccccugcccaccgcacacug ccccugcccaccgcacacugcgcugccccagacccacugugcgugugacagcggcu chr11:568113..568169:-
chrX_2771 2.6 0.73 ± 0.35 TRUE 758 758 0 0 yes hsa-miR-98-5p blast ugagguaguaaguuguauugu uauacaacuuacuacuuuccc ugagguaguaaguuguauuguugugggguagggauauuaggccccaauuagaagauaacuauacaacuuacuacuuuccc chrX:53556240..53556320:-
chr8_1280 2.6 0.73 ± 0.35 STAR 961 961 0 0 yes hsa-miR-320a-5p blast aaaagcuggguugagagggcg ccuucucuucccgguucuucc ccuucucuucccgguucuucccggagucgggaaaagcuggguugagagggcg chr8:22244975..22245027:-
chr11_1669 2.6 0.73 ± 0.35 TRUE 15 15 0 0 yes hsa-miR-483-5p blast aagacgggaggaaagaagggag cacuccucuccucccgucuucu aagacgggaggaaagaagggagugguuccaucacgccuccucacuccucuccucccgucuucu chr11:2134139..2134202:-
chr7_1134 2.6 0.73 ± 0.35 STAR 42 42 0 0 yes hsa-miR-339-5p blast ugagcgccucgacgacagag cuguccuccaggagcucacg cuguccuccaggagcucacgugugccugccugugagcgccucgacgacagag chr7:1022957..1023009:-
chr7_1187 2.6 0.73 ± 0.35 TRUE 72 72 0 0 yes hsa-miR-106b-5p blast uaaagugcugacagugcaga cgcacuguggguacuugcug uaaagugcugacagugcagauagugguccucuccgugcuaccgcacuguggguacuugcug chr7:100094002..100094063:-
chr3_543 2.5 0.73 ± 0.35 STAR 33 24 0 9 yes hsa-miR-28-5p blast cacuagauugugagcuccugga ucaaggagcucacagucuau ucaaggagcucacagucuauugaguuaccuuucugacuuucccacuagauugugagcuccugga chr3:188688791..188688855:+
chr3_571 2.5 0.73 ± 0.35 TRUE 19115 19115 0 0 yes hsa-let-7g-5p blast ugagguaguaguuuguacagu uguacaggccacugccuugcc ugagguaguaguuuguacaguuugagggucuaugauaccacccgguacaggagauaacuguacaggccacugccuugcc chr3:52268278..52268357:-
chr19_2492 2.5 0.73 ± 0.35 STAR 24 24 0 0 yes hsa-miR-27a-5p blast uucacaguggcuaaguucc ggcuuagcugcuugugagca ggcuuagcugcuugugagcaggguccacaccaagucguguucacaguggcuaaguucc chr19:13836448..13836506:-
chr9_1362 2.5 0.73 ± 0.35 TRUE 8661 8661 0 0 yes hsa-let-7f-5p blast ugagguaguagauuguauagu uauacaaucuauugccuuccc ugagguaguagauuguauaguugugggguagugauuuuacccuguucaggagauaacuauacaaucuauugccuuccc chr9:94176352..94176430:+
chr2_372 2.5 0.73 ± 0.35 TRUE 1980 1980 0 0 yes hsa-miR-26b-5p blast uucaaguaauucaggauagguu ccuguucuccauuacuuggcu uucaaguaauucaggauagguugugugcuguccagccuguucuccauuacuuggcu chr2:218402656..218402712:+
chr20_2518 2.5 0.73 ± 0.35 TRUE 12 12 0 0 yes hsa-miR-499a-5p blast uuaagacuugcagugauguuu acaucacagcaagucugugcu uuaagacuugcagugauguuuaacuccucuccacgugaacaucacagcaagucugugcu chr20:34990407..34990466:+
chr19_2468 2.5 0.73 ± 0.35 TRUE 172 172 0 0 yes hsa-let-7e-5p blast ugagguaggagguuguauaguu cuauacggccuccuagcuuucc ugagguaggagguuguauaguugaggaggacacccaaggagaucacuauacggccuccuagcuuucc chr19:51692792..51692859:+
chr12_1796 2.5 0.73 ± 0.35 TRUE 9777 9777 0 0 yes hsa-let-7i-5p blast ugagguaguaguuugugcuguu cugcgcaagcuacugccuugcu ugagguaguaguuugugcuguuggucggguugugacauugcccgcuguggagauaacugcgcaagcuacugccuugcu chr12:62603690..62603768:+
chrX_2827 2.4 0.73 ± 0.35 TRUE 105 105 0 0 yes hsa-miR-505-5p blast gggagccaggaaguauugaugu gucaacacuugcugguuuccuc gggagccaggaaguauugauguuucugccaguuuagcgucaacacuugcugguuuccuc chrX:139924158..139924217:-
chr21_2606 2.4 0.73 ± 0.35 TRUE 71 71 0 0 yes hsa-miR-155-5p blast uuaaugcuaaucgugauaggg cuacauauuagcauuaaca uuaaugcuaaucgugauagggguuuuugccuccaacugacuccuacauauuagcauuaaca chr21:25573982..25574043:+
chr1_180 2.4 0.73 ± 0.35 STAR 54 54 0 0 yes hsa-miR-101-5p blast uacaguacugugauaacugaag ucaguuaucacagugcugaugcu ucaguuaucacagugcugaugcugucuauucuaaagguacaguacugugauaacugaag chr1:65058440..65058499:-
chr11_1619 2.4 0.73 ± 0.35 STAR 348 348 0 0 yes hsa-miR-130a-5p blast cagugcaauguuaaaagggca cucuuuucacauugugcuacu cucuuuucacauugugcuacugucugcaccugucacuagcagugcaauguuaaaagggca chr11:57641212..57641272:+
chr12_1841 2.4 0.73 ± 0.35 TRUE 1379 1379 0 0 yes hsa-miR-26a-5p blast uucaaguaauccaggauaggcu ccuauucuugauuacuuguuuc uucaaguaauccaggauaggcuguuuccaucugugaggccuauucuugauuacuuguuuc chr12:57824619..57824679:-
chr6_1029 2.4 0.73 ± 0.35 TRUE 153 116 0 37 yes hsa-miR-30a-5p blast uguaaacauccucgacuggaag cuuucagucggauguuugcagc uguaaacauccucgacuggaagcugugaagccacagaugggcuuucagucggauguuugcagc chr6:71403553..71403616:-
chr7_1070 2.4 0.73 ± 0.35 TRUE 21 21 0 0 yes hsa-miR-550a-3-5p blast agugccugagggaguaagagc ucuuacucccucaggcacauc agugccugagggaguaagagcccuguuguuguaagauagugucuuacucccucaggcacauc chr7:30289814..30289876:+
chr7_1203 2.4 0.73 ± 0.35 TRUE 145 145 0 0 yes hsa-miR-182-5p blast uuuggcaaugguagaacucaca gugguucuagacuugccaacua uuuggcaaugguagaacucacacuggugagguaacaggauccggugguucuagacuugccaacua chr7:129770405..129770470:-
chr5_819 2.4 0.73 ± 0.35 STAR 330 330 0 0 yes hsa-miR-143-5p blast ugagaugaagcacuguagcu gugcagugcugcaucucugg gugcagugcugcaucucuggucaguugggagucugagaugaagcacuguagcu chr5:149428944..149428997:+
chr9_1364 2.4 0.73 ± 0.35 TRUE 2196 2195 0 1 yes hsa-let-7d-5p blast agagguaguagguugcauag cuauacgaccugcugccuuucu agagguaguagguugcauaguuuuagggcagggauuuugcccacaaggagguaacuauacgaccugcugccuuucu chr9:94178840..94178916:+
chrX_2773 2.4 0.73 ± 0.35 TRUE 8777 8777 0 0 yes hsa-let-7f-5p blast ugagguaguagauuguauagu uauacagucuacugucuuucc ugagguaguagauuguauaguuuuagggucauaccccaucuuggagauaacuauacagucuacugucuuucc chrX:53557195..53557267:-
chr6_947 2.4 0.73 ± 0.35 TRUE 71 71 0 0 yes hsa-miR-206 blast uggaauguaaggaagugugugg acaugcuucuuuauauccccaua acaugcuucuuuauauccccauauggauuacuuugcuauggaauguaaggaagugugugg chr6:52144362..52144422:+
chr14_1988 2.4 0.73 ± 0.35 TRUE 24 24 0 0 yes hsa-miR-432-5p blast ucuuggaguaggucauugggugg acuggauggcuccuccaugucu ucuuggaguaggucauuggguggauccucuauuuccuuacgugggccacuggauggcuccuccaugucu chr14:100884495..100884564:+
chr15_2078 2.3 0.73 ± 0.35 TRUE 73 73 0 0 yes hsa-miR-7-5p blast uggaagacuagugauuuuguugu aacaaaucccagucuaccuaa uggaagacuagugauuuuguuguugucuuacugcgcucaacaacaaaucccagucuaccuaa chr15:88611855..88611917:+
chr17_2320 2.3 0.73 ± 0.35 STAR 3018 3018 0 0 yes hsa-miR-144-5p blast uacaguauagaugaugua uaucaucauauacuguaag uaucaucauauacuguaaguuugcgaugagacacuacaguauagaugaugua chr17:28861549..28861601:-
chr9_1405 2.3 0.73 ± 0.35 TRUE 73 73 0 0 yes hsa-miR-7-5p blast uggaagacuagugauuuuguugu aacaaaucacagucugccaua uggaagacuagugauuuuguuguuuuuagauaacuaaaucgacaacaaaucacagucugccaua chr9:83969770..83969834:-
chr18_2398 2.3 0.73 ± 0.35 TRUE 12925 12925 0 0 yes hsa-miR-122-5p blast uggagugugacaaugguguuu acgccauuaucacacuaaaua uggagugugacaaugguguuugugucuaaacuaucaaacgccauuaucacacuaaaua chr18:58451087..58451145:+
chr7_1149 2.3 0.73 ± 0.35 TRUE 19 19 0 0 yes hsa-miR-550a-3-5p blast ugccugagggaguaagagu ucuuacucccucaggcaca ugccugagggaguaagaguccuguuguuguaagauagugucuuacucccucaggcaca chr7:29680748..29680806:-
chr22_2668 2.3 0.73 ± 0.35 TRUE 26446 26446 0 0 yes hsa-let-7a-5p blast ugagguaguagguuguauag auacaaucuacugucuuucc ugagguaguagguuguauaguuuggggcucugcccugcuaugggauaacuauacaaucuacugucuuucc chr22:46112751..46112821:+
chr19_2490 2.3 0.73 ± 0.35 STAR 222 222 0 0 yes hsa-miR-24-2-5p blast uggcucaguucagcaggaacagg cgugccuacugagcugaaacacagu cgugccuacugagcugaaacacaguugguuuguguacacuggcucaguucagcaggaacagg chr19:13836287..13836349:-
chr22_2651 2.3 0.73 ± 0.35 STAR 126 126 0 0 yes hsa-miR-130b-5p blast cagugcaaugaugaaagggca cucuuucccuguugcacuacu cucuuucccuguugcacuacuauaggccgcugggaagcagugcaaugaugaaagggca chr22:21653316..21653374:+
chr17_2266 2.2 0.73 ± 0.35 TRUE 174 174 0 0 yes hsa-miR-21-5p blast uagcuuaucagacugauguug acaccagucgaugggcuguc uagcuuaucagacugauguugacuguugaaucucauggcaacaccagucgaugggcuguc chr17:59841272..59841332:+
chrX_2762 2.2 0.73 ± 0.35 STAR 15 15 0 0 yes hsa-miR-221-5p blast agcuacauugucugcuggguu ccuggcauacaauguagauuucugu ccuggcauacaauguagauuucuguguucguuaggcaacagcuacauugucugcuggguu chrX:45746181..45746241:-
chr17_2288 2.2 0.73 ± 0.35 STAR 163 161 0 2 yes hsa-miR-22-5p blast aagcugccaguugaagaacu aguucuucaguggcaagcu aguucuucaguggcaagcuuuauguccugacccagcuaaagcugccaguugaagaacu chr17:1713915..1713973:-
chr13_1893 2.2 0.73 ± 0.35 STAR 166 166 0 0 yes hsa-miR-92a-1-5p blast uauugcacuugucccggccugu agguugggaucgguugcaaugcu agguugggaucgguugcaaugcuguguuucuguaugguauugcacuugucccggccugu chr13:91351323..91351382:+
chr21_2602 2.2 0.73 ± 0.35 TRUE 528 528 0 0 yes hsa-let-7c-5p blast ugagguaguagguuguau acaaccuucuagcuuucc ugagguaguagguuguaugguuuagaguuacacccugggaguuaacuguacaaccuucuagcuuucc chr21:16539837..16539904:+
chr9_1360 2.2 0.73 ± 0.35 TRUE 26450 26450 0 0 yes hsa-let-7a-5p blast ugagguaguagguuguauag auacaaucuacugucuuucc ugagguaguagguuguauaguuuuagggucacacccaccacugggagauaacuauacaaucuacugucuuucc chr9:94175961..94176034:+
chr7_1205 2.1 0.73 ± 0.35 TRUE 28 25 0 3 yes hsa-miR-183-5p blast uauggcacugguagaauuca ugaauuaccgaagggccaua uauggcacugguagaauucacugugaacagucucagucagugaauuaccgaagggccaua chr7:129774928..129774988:-
chr1_181 2.1 0.73 ± 0.35 TRUE 14 14 0 0 yes hsa-miR-186-5p blast caaagaauucuccuuuugggcu cccaaaggugaauuuuuuggg caaagaauucuccuuuugggcuuucugguuuuauuuuaagcccaaaggugaauuuuuuggg chr1:71067641..71067702:-
chrX_2789 2.1 0.73 ± 0.35 TRUE 36 33 0 3 yes hsa-miR-361-5p blast uuaucagaaucuccaggggua ucccccaggugugauucugauu uuaucagaaucuccagggguacuuuauaauuucaaaaagucccccaggugugauucugauu chrX:85903641..85903702:-
chr7_1114 2.1 0.73 ± 0.35 TRUE 293 293 0 0 yes hsa-miR-335-5p blast ucaagagcaauaacgaaaaaug uuuuucauuauugcuccugacc ucaagagcaauaacgaaaaauguuugucauaaaccguuuuucauuauugcuccugacc chr7:130496125..130496183:+
chr20_2525 2.1 0.73 ± 0.35 STAR 16 16 0 0 yes hsa-miR-1-5p blast uggaauguaaagaaguauguau acauacuucuuuauaugcccaua acauacuucuuuauaugcccauauggaccugcuaagcuauggaauguaaagaaguauguau chr20:62554311..62554372:+
chr2_390 2.1 0.73 ± 0.35 STAR 11 11 0 0 yes hsa-miR-1301-5p blast ugcagcugccugggagugacuuc ggucgcucuaggcaccgcagc ggucgcucuaggcaccgcagcacugugcuggggauguugcagcugccugggagugacuuc chr2:25328650..25328710:-
chr1_242 2.0 0.73 ± 0.35 STAR 126 126 0 0 yes hsa-miR-29c-5p blast uagcaccauuugaaaucgg gauuucuccugguguucaga gauuucuccugguguucagagucuguuuuugucuagcaccauuugaaaucgg chr1:207801867..207801919:-
chrX_2817 2.0 0.73 ± 0.35 TRUE 310 310 0 0 yes hsa-miR-20b-5p blast caaagugcucauagugcaggua acuguaguaugggcacuuccag caaagugcucauagugcagguaguuuuggcaugacucuacuguaguaugggcacuuccag chrX:134169812..134169872:-
chr1_252 2.0 0.73 ± 0.35 TRUE 117 117 0 0 yes hsa-miR-320b blast aaaagcuggguugagagg ucucuucccagauuucc ucucuucccagauuucccaaaguugggaaaagcuggguugagagg chr1:224257052..224257097:-
chr7_1210 2.0 0.73 ± 0.35 STAR 72 72 0 0 yes hsa-miR-29b-1-5p blast uagcaccauuugaaaucagug cugguuucauauggugguuuaga cugguuucauauggugguuuagauuuaaauagugauugucuagcaccauuugaaaucagug chr7:130877468..130877529:-
chr17_2232 2.0 0.73 ± 0.35 TRUE 38 38 0 0 yes hsa-miR-744-5p blast ugcggggcuagggcuaacagc uguugccacuaaccucaacc ugcggggcuagggcuaacagcagucuuacugaagguuuccuggaaaccacgcacaugcuguugccacuaaccucaacc chr17:12081908..12081986:+
chr17_2350 2.0 0.73 ± 0.35 STAR 13 13 0 0 yes hsa-miR-454-5p blast uagugcaauauugcuuauaggguu cccuaucaauauugucucugc cccuaucaauauugucucugcuguguaaauaguucugaguagugcaauauugcuuauaggguu chr17:59137785..59137848:-
chr14_2007 2.0 0.73 ± 0.35 STAR 12 12 0 0 yes hsa-miR-409-5p blast cgaauguugcucggugaaccccu agguuacccgagcaacuuugca agguuacccgagcaacuuugcaucuggacgacgaauguugcucggugaaccccu chr14:101065313..101065367:+
chr11_1711 2.0 0.73 ± 0.35 TRUE 13 13 0 0 yes hsa-miR-192-5p blast cugaccuaugaauugacagcc cugccaauuccauaggucacag cugaccuaugaauugacagccagugcucucgucuccccucuggcugccaauuccauaggucacag chr11:64891158..64891223:-
chr9_1369 2.0 0.73 ± 0.35 STAR 223 223 0 0 yes hsa-miR-24-1-5p blast uggcucaguucagcaggaacagg ggugccuacugagcugauaucagu ggugccuacugagcugauaucaguucucauuuuacacacuggcucaguucagcaggaacagg chr9:95086024..95086086:+
chr11_1763 1.9 0.17 ± 0.27 TRUE 26453 26453 0 0 yes hsa-let-7a-5p blast ugagguaguagguuguauag guacagccuccuagcuuucc ugagguaguagguuguauaguuuagaauuacaucaagggagauaacuguacagccuccuagcuuucc chr11:122146522..122146589:-
chr15_2102 1.9 0.17 ± 0.27 STAR 40 40 0 0 yes hsa-miR-628-5p blast ucuaguaagaguggcagucgaag caugcugacauauuuacuagagg caugcugacauauuuacuagaggguaaaauuaauaaccuucuaguaagaguggcagucgaag chr15:55372951..55373013:-
chr14_2000 1.9 0.17 ± 0.27 TRUE 23 23 0 0 yes hsa-miR-382-5p blast gaaguuguucgugguggauucg aaucauucacggacaacacuuuu gaaguuguucgugguggauucgcuuuacuuaugacgaaucauucacggacaacacuuuu chr14:101054315..101054374:+
chr19_2444 1.9 0.17 ± 0.27 TRUE 73 73 0 0 yes hsa-miR-7-5p blast uggaagacuagugauuuuguugu aacaagucacagccggccuca uggaagacuagugauuuuguuguucugauguacuacgacaacaagucacagccggccuca chr19:4770699..4770759:+
chr13_1919 1.9 0.17 ± 0.27 TRUE 118850 118850 0 0 yes hsa-miR-16-5p blast uagcagcacguaaauauuggcg ccaguauuaacugugcugcugaa uagcagcacguaaauauuggcguuaagauucuaaaauuaucuccaguauuaacugugcugcugaa chr13:50048983..50049048:-
chr2_352 1.9 0.17 ± 0.27 TRUE 38 38 0 0 yes hsa-miR-10b-5p blast uacccuguagaaccgaauuugu agauucgauucuaggggaaua uacccuguagaaccgaauuugugugguauccguauagucacagauucgauucuaggggaaua chr2:176150328..176150390:+
chr18_2420 1.9 0.17 ± 0.27 TRUE 16 16 0 0 yes hsa-miR-1-3p blast uggaauguaaagaaguauguau acauacuucuuuauguacccaua acauacuucuuuauguacccauaugaacauacaaugcuauggaauguaaagaaguauguau chr18:21829014..21829075:-
chr7_1208 1.9 0.17 ± 0.27 STAR 95 95 0 0 yes hsa-miR-29a-5p blast uagcaccaucugaaaucgguu cugauuucuuuugguguucaga cugauuucuuuugguguucagagucaauauaauuuucuagcaccaucugaaaucgguu chr7:130876748..130876806:-
chrX_2784 1.9 0.17 ± 0.27 TRUE 58 58 0 0 yes hsa-miR-421 blast aucaacagacauuaauugggcg cucauuaaauguuuguugaauga cucauuaaauguuuguugaaugaaaaaaugaaucaucaacagacauuaauugggcg chrX:74218392..74218448:-
chr1_171 1.9 0.17 ± 0.27 TRUE 15 15 0 0 yes hsa-miR-6734-5p blast uugaggggagaaugaggugga cccucacucuucucucaggu uugaggggagaaugagguggagaagcccagguucugaauccccuucccucacucuucucucaggu chr1:43364645..43364710:-
chrX_2814 1.8 0.17 ± 0.27 STAR 161 161 0 0 yes hsa-miR-92a-2-5p blast uauugcacuugucccggccugu ggguggggauuuguugcauuacu ggguggggauuuguugcauuacuuguguucuauauaaaguauugcacuugucccggccugu chrX:134169543..134169604:-
chr8_1323 1.8 0.17 ± 0.27 TRUE 729 729 0 0 yes hsa-miR-30d-5p blast uguaaacauccccgacuggaagcu cuuucagucagauguuugcugc uguaaacauccccgacuggaagcuguaagacacagcuaagcuuucagucagauguuugcugc chr8:134804878..134804940:-
chrX_2812 1.7 0.17 ± 0.27 STAR 16 16 0 0 yes hsa-miR-363-5p blast aauugcacgguauccaucugu ggguggaucacgaugcaauuuu ggguggaucacgaugcaauuuugaugaguaucauaggagaaaaauugcacgguauccaucugu chrX:134169382..134169445:-
chr14_1986 1.7 0.17 ± 0.27 TRUE 10 10 0 0 yes hsa-miR-345-5p blast gcugacuccuaguccagggcu cccugaacgaggggucuggag gcugacuccuaguccagggcucgugauggcuggugggcccugaacgaggggucuggag chr14:100307875..100307933:+
chr5_911 1.7 0.17 ± 0.27 TRUE 20 20 0 0 yes hsa-miR-340-5p blast uuauaaagcaaugagacugauu uccgucucaguuacuuuauagcc uuauaaagcaaugagacugauugucauaugucguuugugggauccgucucaguuacuuuauagcc chr5:180015317..180015382:-
chr5_906 1.7 0.17 ± 0.27 STAR 1492 1492 0 0 yes hsa-miR-103a-1-5p blast agcagcauuguacagggcu cuucuuuacagugcugccuug cuucuuuacagugcugccuuguugcauauggaucaagcagcauuguacagggcu chr5:168560907..168560961:-
chr18_2373 1.7 0.17 ± 0.27 TRUE 83 83 0 0 yes hsa-miR-320c blast aaaagcuggguugagagg ucucuuuccaguucuucc ucucuuuccaguucuucccagaauugggaaaagcuggguugagagg chr18:24321687..24321733:+
chr18_2371 1.7 0.17 ± 0.27 TRUE 83 83 0 0 yes hsa-miR-320c blast aaaagcuggguugagagg ucucuucccaguucuucc ucucuucccaguucuucccagagucaggaaaagcuggguugagagg chr18:21683530..21683576:+
chr1_244 1.7 0.17 ± 0.27 STAR 72 72 0 0 yes hsa-miR-29b-2-5p blast uagcaccauuugaaaucagug cugguuucacaugguggcuuaga cugguuucacaugguggcuuagauuuuuccaucuuuguaucuagcaccauuugaaaucagug chr1:207802451..207802513:-
chr10_1546 1.6 0.17 ± 0.27 TRUE 1133 1133 0 0 yes hsa-miR-107 blast agcagcauuguacagggcu cuucuuuacaguguugccuug cuucuuuacaguguugccuuguggcauggaguucaagcagcauuguacagggcu chr10:89592759..89592813:-
chr20_2513 1.6 0.17 ± 0.27 STAR 1492 1492 0 0 yes hsa-miR-103a-2-5p blast agcagcauuguacagggcu cuucuuuacagugcugccuug cuucuuuacagugcugccuuguagcauucaggucaagcagcauuguacagggcu chr20:3917505..3917559:+
chr9_1382 1.6 0.17 ± 0.27 TRUE 18 18 0 0 yes hsa-miR-181b-5p blast acauucauugcugucggugggu ucacugaucaaugaaugcaa acauucauugcugucgguggguuugagucugaaucaacucacugaucaaugaaugcaa chr9:124693725..124693783:+
chrX_2714 1.6 0.17 ± 0.27 TRUE 69 69 0 0 yes hsa-miR-660-5p blast uacccauugcauaucggaguugu accuccugugugcauggauuac uacccauugcauaucggaguugugaauucucaaaacaccuccugugugcauggauuac chrX:50013255..50013313:+
chr17_2337 1.5 0.17 ± 0.27 TRUE 67 67 0 0 yes hsa-miR-10a-5p blast uacccuguagauccgaauuugu aaauucguaucuaggggaaua uacccuguagauccgaauuuguguaaggaauuuuguggucacaaauucguaucuaggggaaua chr17:48579863..48579926:-
chr19_2470 1.5 0.17 ± 0.27 TRUE 10 10 0 0 yes hsa-miR-125a-5p blast ucccugagacccuuuaaccugu aggugagguucuugggagcc ucccugagacccuuuaaccugugaggacauccagggucacaggugagguucuugggagcc chr19:51693267..51693327:+
chr9_1333 1.5 0.17 ± 0.27 STAR 57 57 0 0 yes hsa-miR-101-2-5p blast uacaguacugugauaacugaag ucgguuaucaugguaccgaugcu ucgguuaucaugguaccgaugcuguauaucugaaagguacaguacugugauaacugaag chr9:4850307..4850366:+
chr1_233 1.5 0.17 ± 0.27 TRUE 18 18 0 0 yes hsa-miR-181b-5p blast acauucauugcugucggugggu ucacugaacaaugaaugcaa acauucauugcugucgguggguugaacuguguggacaagcucacugaacaaugaaugcaa chr1:198858886..198858946:-
chr1_151 1.4 0.17 ± 0.27 TRUE 10 10 0 0 yes hsa-miR-34a-5p blast uggcagugucuuagcugguug aucagcaaguauacugcccua uggcagugucuuagcugguuguugugagcaauaguaaggaagcaaucagcaaguauacugcccua chr1:9151691..9151756:-
chr1_235 1.3 0.17 ± 0.27 TRUE 41 41 0 0 yes hsa-miR-181a-5p blast aacauucaacgcugucggugagu ccaucgaccguugauuguacc aacauucaacgcugucggugaguuuggaauuaaaaucaaaaccaucgaccguugauuguacc chr1:198859068..198859130:-
chr7_1146 1.2 0.17 ± 0.27 STAR 10 10 0 0 yes hsa-miR-148a-5p blast ucagugcacuacagaacuuugu aaaguucugagacacuccgacu aaaguucugagacacuccgacucugaguaugauagaagucagugcacuacagaacuuugu chr7:25949921..25949981:-
chrX_2823 1.2 0.17 ± 0.27 TRUE 9 9 0 0 yes hsa-miR-503-5p blast uagcagcgggaacaguucugc gguauuguuuccgcugccagg uagcagcgggaacaguucugcagugagcgaucggugcucugggguauuguuuccgcugccagg chrX:134546330..134546393:-
chr13_1921 1.1 0.17 ± 0.27 TRUE 409 409 0 0 yes hsa-miR-15a-5p blast uagcagcacauaaugguuugu aggccauauugugcugccuca uagcagcacauaaugguuuguggauuuugaaaaggugcaggccauauugugcugccuca chr13:50049129..50049188:-
chr1_63 0.9 0.00 ± 0.00 TRUE 117 117 0 0 yes hsa-miR-320b blast aaaagcuggguugagagg ucucuuucuaguucuucc ucucuuucuaguucuuccuagagugaggaaaagcuggguugagagg chr1:116671758..116671804:+
chr8_1322 0.9 0.00 ± 0.00 STAR 10 4 0 6 yes hsa-miR-30b-5p blast cugggagguggauguuuacu uguaaacauccuacacucagcu uguaaacauccuacacucagcuguaauacauggauuggcugggagguggauguuuacu chr8:134800533..134800591:-
chr8_1274 0.7 0.00 ± 0.00 NA 9 9 0 0 yes hsa-miR-1322 blast uacgucaucguugucaucguc cggugaucccgauggugugag cggugaucccgauggugugagcuggaaauggggugcuacgucaucguugucaucguc chr8:11035221..11035278:-
chr3_524 0.6 0.00 ± 0.00 TRUE 605 605 0 0 yes hsa-miR-15b-5p blast uagcagcacaucaugguu ucauuauuugcugcucua uagcagcacaucaugguuuacaugcuacagucaagaugcgaaucauuauuugcugcucua chr3:160404606..160404666:+
chrX_2696 0.6 0.00 ± 0.00 TRUE 9 9 0 0 yes hsa-miR-651-5p blast uuuaggauaagcuugacuuuu aaggaaaguguauccuaaaag uuuaggauaagcuugacuuuuguucaaauaaaaaugcaaaaggaaaguguauccuaaaag chrX:8126979..8127039:+
chr1_245 0.6 0.00 ± 0.00 TRUE 9 6 0 3 yes hsa-miR-194-5p blast uguaacagcaacuccaugugg ccaguggagaugcuguuacu uguaacagcaacuccauguggacuguguaccaauuuccaguggagaugcuguuacu chr1:220118171..220118227:-
chr9_1428 0.5 0.00 ± 0.00 STAR 9 9 0 0 yes hsa-miR-199b-5p blast acaguagucugcacauugguu ccaguguuuagacuaucuguuc ccaguguuuagacuaucuguucaggacucccaaauuguacaguagucugcacauugguu chr9:128244745..128244804:-
chr9_1395 0.3 0.00 ± 0.00 TRUE 8 8 0 0 yes hsa-miR-31-5p blast aggcaagaugcuggcauagcug gcuaugccaacauauugccauc aggcaagaugcuggcauagcuguugaacugggaaccugcuaugccaacauauugccauc chr9:21512119..21512178:-
chr4_704 0 0.00 ± 0.00 STAR 8 8 0 0 yes hsa-miR-95-5p blast uucaacggguauuuauugagca cucaauaaaugucuguugaauu cucaauaaaugucuguugaauugaaaugcguuacauucaacggguauuuauugagca chr4:8005311..8005368:-
chr12_1777 -0.1 0.00 ± 0.00 STAR 6 6 0 0 yes hsa-miR-200c-5p blast uaauacugccggguaaugaugg gucuuacccagcaguguuugg gucuuacccagcaguguuugggugcgguugggagucucuaauacugccggguaaugaugg chr12:6963703..6963763:+
chr19_2480 -0.1 0.00 ± 0.00 TRUE 7 7 0 0 yes hsa-miR-1283 blast ucuacaaaggaaagcgcuuucu aaaucgcuucccuuuggagugu ucuacaaaggaaagcgcuuucuguugucugaaagaaaagaaaucgcuucccuuuggagugu chr19:53758244..53758305:+
chr19_2474 -0.2 0.00 ± 0.00 TRUE 7 7 0 0 yes hsa-miR-1283 blast ucuacaaaggaaagcgcuuucu aaagcgcuucccuuuugagggu ucuacaaaggaaagcgcuuucuguugucagaaagaagagaaagcgcuucccuuuugagggu chr19:53688493..53688554:+
chr11_1713 -0.3 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-194-5p blast uguaacagcaacuccaugugg aguggggcugcuguuaucug uguaacagcaacuccauguggaagugcccacugguuccaguggggcugcuguuaucug chr11:64891367..64891425:-
chr2_329 -0.3 0.00 ± 0.00 STAR 7 7 0 0 yes hsa-miR-128-1-5p blast ucacagugaaccggucucuuu cggggccguagcacugucugaga cggggccguagcacugucugagagguuuacauuucucacagugaaccggucucuuu chr2:135665410..135665466:+
chr22_2656 -0.3 0.00 ± 0.00 TRUE 7 7 0 0 yes hsa-miR-3200-5p blast aaucugagaaggcgcacaagguu ccuugcgcuacucaggucug aaucugagaaggcgcacaagguuuguguccaauacaguccacaccuugcgcuacucaggucug chr22:30731568..30731631:+
chr4_668 -0.5 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-576-5p blast auucuaauuucuccacgucuuug aagauguggaaaaauuggaaucc auucuaauuucuccacgucuuugguaauaagguuuggcaaagauguggaaaaauuggaaucc chr4:109488712..109488774:+
chr15_2091 -0.7 0.00 ± 0.00 TRUE 5 5 0 0 yes hsa-miR-627-5p blast ugagucucuaagaaaagaggag ccucuuuucuuugagacucacu ugagucucuaagaaaagaggaggugguuguuuuccuccucuuuucuuugagacucacu chr15:42199592..42199650:-
chr7_1137 -0.7 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-589-5p blast ugagaaccacgucugcucuga agaacaaaugccgguucccaga ugagaaccacgucugcucugagcuggguacugccuguucagaacaaaugccgguucccaga chr7:5495833..5495894:-
chr5_830 -0.8 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-146a-5p blast ugagaacugaauuccauggguu ccucugaaauucaguucuucag ugagaacugaauuccauggguugugucagugucagaccucugaaauucaguucuucag chr5:160485371..160485429:+
chr16_2190 -0.8 0.00 ± 0.00 TRUE 5 5 0 0 yes hsa-miR-5189-5p blast ucugggcacaggcggauggac ccaaccgucagagcccagacc ucugggcacaggcggauggacaggcuggccucuggaugaccugccaaccgucagagcccagacc chr16:88468942..88469006:+
chr17_2316 -0.9 0.00 ± 0.00 STAR 22 22 0 0 no hsa-miR-1180-5p blast uuuccggcucgcgugggugugu ggacccacccggccgggaaua ggacccacccggccgggaauagugcuccugguuguuuccggcucgcgugggugugu chr17:19344512..19344568:-
chr19_2501 -0.9 0.00 ± 0.00 TRUE 4 4 0 0 yes hsa-miR-641 blast aaagacauaggauagaguca acuguccuaugucuuucc aaagacauaggauagagucaccucuguccucuguccucuaccuauagaggugacuguccuaugucuuucc chr19:40282556..40282626:-
chr11_1707 -1.0 0.00 ± 0.00 TRUE 14 14 0 0 no hsa-miR-1908-5p blast cggcggggacggcgauuggu cggccgccggcuccgccccg cggcggggacggcgauugguccguauguguggugccaccggccgccggcuccgccccg chr11:61815171..61815229:-
chr6_1011 -1.0 0.00 ± 0.00 TRUE 5 5 0 0 yes hsa-miR-4646-5p blast cugggaagaggagcugagggac cccucucccuucccaggu cugggaagaggagcugagggacauugcggagagggucucacauugucccucucccuucccaggu chr6:31701026..31701090:-
chr17_2273 -1.1 0.00 ± 0.02 TRUE 26 26 0 0 no hsa-miR-3615 blast ucucucggcuccucgcggcucg acgccgcgcggggcggggauugg acgccgcgcggggcggggauuggucugugguccucucucggcuccucgcggcucg chr17:74748629..74748684:+
chr1_204 -1.1 0.00 ± 0.02 TRUE 4 4 0 0 yes hsa-miR-7852-3p blast uauguaguagucaaaggcauu ugccuuugacuacuacauaca ugccuuugacuacuacauacauaugccuacauaugaaaguaguaguaggcauauguauguaguagucaaaggcauu chr1:107897224..107897300:-
chr1_55 -1.2 0.00 ± 0.02 TRUE 4 4 0 0 yes hsa-miR-7852-3p blast uauguaguagucaaaggcauu ugccuuugacuacuacauaca ugccuuugacuacuacauacauaugccuacuacuacuuucauauguaggcauauguauguaguagucaaaggcauu chr1:107897226..107897302:+
chrX_2819 -1.2 0.00 ± 0.02 TRUE 9 9 0 0 yes hsa-miR-18b-5p blast uaaggugcaucuagugcag gcccuaaaugccccuucuggc uaaggugcaucuagugcaguuagugaagcagcuuagaaucuacugcccuaaaugccccuucuggc chrX:134170041..134170106:-
chr14_2004 -1.2 0.00 ± 0.02 TRUE 5 5 0 0 yes hsa-miR-154-5p blast uagguuauccguguugccuucg acgaaucauacacgguugaccuauu uagguuauccguguugccuucgcuuuauuugugacgaaucauacacgguugaccuauu chr14:101059768..101059826:+
chr17_2295 -1.2 0.00 ± 0.02 TRUE 4 4 0 0 yes hsa-miR-497-5p blast cagcagcacacugugguuugu aaaccacacugugguguuagagcgag cagcagcacacugugguuuguacggcacuguggccacguccaaaccacacugugguguuagagcgag chr17:7017932..7017999:-
chr11_1733 -1.2 0.00 ± 0.02 TRUE 3 3 0 0 yes hsa-miR-1304-5p blast cgguuugaggcuacagugagau cucacuguagccucgaaccccu cgguuugaggcuacagugagaugugauccugccacaucucacuguagccucgaaccccu chr11:93733689..93733748:-
chr16_2220 -1.2 0.00 ± 0.02 STAR 4 4 0 0 yes hsa-miR-328-5p blast cuggcccucucugcccuuccgu gggggggcaggaggggcucaggg gggggggcaggaggggcucagggagaaagugcauacagccccuggcccucucugcccuuccgu chr16:67202326..67202389:-
chr2_460 -1.2 0.00 ± 0.02 STAR 26 26 0 0 no hsa-miR-375-5p blast uuuguucguucggcucgcg cgagccccucgcacaaacc cgagccccucgcacaaaccggaccugagcguuuuguucguucggcucgcg chr2:219001650..219001700:-
chr16_2140 -1.2 0.00 ± 0.02 TRUE 5 5 0 0 yes hsa-miR-193b-5p blast cgggguuuugagggcgagaug acuggcccucaaagucccgcu cgggguuuugagggcgagaugaguuuauguuuuauccaacuggcccucaaagucccgcu chr16:14303979..14304038:+
chr7_1085 -1.3 0.00 ± 0.02 STAR 6 6 0 0 yes hsa-miR-590-5p blast uaauuuuauguauaagcuagu gagcuuauucauaaaagugca gagcuuauucauaaaagugcaguauggugaagucaaucuguaauuuuauguauaagcuagu chr7:74191212..74191273:+
chr2_398 -1.4 0.00 ± 0.02 STAR 4 4 0 0 yes hsa-miR-3682-5p blast augaugauacagguggagguag acuucuaccuguguuaucauaa acuucuaccuguguuaucauaauaaaggugucaugaugauacagguggagguag chr2:53849135..53849189:-
chr6_930 -1.5 0.00 ± 0.02 TRUE 32 32 0 0 no hsa-miR-877-5p blast uagaggagauggcgcagggga cucuucucccuccucccag uagaggagauggcgcaggggacacgggcaaagacuuggggguuccugggacccucagacguguguccucuucucccuccucccag chr6:30584332..30584417:+
chr17_2297 -1.5 0.00 ± 0.02 TRUE 51 51 0 0 no hsa-miR-324-5p blast cgcauccccuagggcauuggug ccacugccccaggugcugcugg cgcauccccuagggcauugguguaaagcuggagacccacugccccaggugcugcugg chr17:7223307..7223364:-
chr10_1573 -1.5 0.00 ± 0.02 TRUE 30 30 0 0 no hsa-miR-2110 blast uuggggaaacggccgcugagug cucaccgcggucuuuuccucccac uuggggaaacggccgcugagugaggcgucggcuguguuucucaccgcggucuuuuccucccac chr10:114174109..114174172:-
chr19_2489 -1.5 0.00 ± 0.02 TRUE 222 222 0 0 no hsa-miR-24-3p blast uggcucaguucagcaggaacagg ugccuucccugggugggcugaugcuugg uggcucaguucagcaggaacaggggucaagcccccuuggagccugcagccccugccuucccugggugggcugaugcuugg chr19:13836230..13836310:-
chr10_1553 -1.6 0.00 ± 0.02 TRUE 3 3 0 0 yes hsa-miR-3157-5p blast uucagccaggcuagugcagu ugcccuagucuagcugaagc uucagccaggcuagugcagucugcuuugugccaacacuggggugaugacugcccuagucuagcugaagc chr10:96064321..96064390:-
chr10_1564 -1.6 0.00 ± 0.02 STAR 18 18 0 0 no hsa-miR-1307-5p blast cucggcguggcgucggucgug cgaccggaccucgaccggcuc cgaccggaccucgaccggcucgucuguguugccaaucgacucggcguggcgucggucgug chr10:103394300..103394360:-
chr19_2494 -1.6 0.00 ± 0.02 STAR 14 14 0 0 no hsa-miR-23a-5p blast aucacauugccagggauuucc gguuccuggggaugggauuu gguuccuggggaugggauuugcuuccugucacaaaucacauugccagggauuucc chr19:13836594..13836649:-
chr4_685 -1.6 0.00 ± 0.02 STAR 3 3 0 0 yes hsa-miR-3688-5p blast uggaaagacuuugccacucu aguggcaaagucuuuccaua aguggcaaagucuuuccauauguguaacagacauacauacauacauauggaaagacuuugccacucu chr4:159128815..159128882:+
chr8_1292 -1.6 0.00 ± 0.02 TRUE 14416 14416 0 0 no hsa-miR-486-5p blast uccuguacugagcugccccgag cagcggccggcucugauc cagcggccggcucugaucuccauccucccuggggcauccuguacugagcugccccgag chr8:41660483..41660541:-
chr4_766 -1.6 0.00 ± 0.02 STAR 3 3 0 0 yes hsa-miR-3688-5p blast uggaaagacuuugccacucu aguggcaaagucuuuccaua aguggcaaagucuuuccauauguauguauguaugucuguuacacauauggaaagacuuugccacucu chr4:159128813..159128880:-
chr22_2667 -1.7 0.00 ± 0.02 TRUE 26446 26446 0 0 no hsa-let-7a-5p blast ugagguaguagguuguauag ccaagaccgacugcccuuu ccaagaccgacugcccuuuggggugagguaguagguuguauag chr22:46112728..46112771:+
chr14_2001 -1.7 0.00 ± 0.02 STAR 4 4 0 0 yes hsa-miR-323b-5p blast cccaauacacggucgaccucu agguuguccguggugaguucgca agguuguccguggugaguucgcauuauuuaaugaugcccaauacacggucgaccucu chr14:101056232..101056289:+
chr3_567 -1.7 0.00 ± 0.02 TRUE 96 52 0 44 no hsa-miR-425-5p blast aaugacacgaucacucccguug caucgggaaugucguguccg aaugacacgaucacucccguugagugggcacccgagaagccaucgggaaugucguguccg chr3:49020161..49020221:-
chr8_1284 -1.7 0.00 ± 0.02 NA 2 2 0 0 yes hsa-miR-3622b-5p blast ugagcucccgugccugugcacc ugcacaggcaugggaggucagg ugcacaggcaugggaggucaggugagcucagcucccugccucaccugagcucccgugccugugcacc chr8:27701683..27701750:-
chr14_2005 -1.7 0.00 ± 0.02 TRUE 4 4 0 0 yes hsa-miR-496 blast ugaguauuacauggccaaucuc gguuguccaugguguguucauu gguuguccaugguguguucauuuuauuuaugaugaguauuacauggccaaucuc chr14:101060595..101060649:+
chrX_2722 -1.8 0.00 ± 0.02 TRUE 183 183 0 0 no hsa-miR-223-3p blast ugucaguuugucaaauaccccaa gggauaugacgaauggacugc ugucaguuugucaaauaccccaagugcggcacaugcuuaccagcucuaggccagggcagaugggauaugacgaauggacugc chrX:66018936..66019018:+
chr6_922 -1.8 0.00 ± 0.02 TRUE 7 7 0 0 yes hsa-miR-3143 blast auaacauuguaaagcgcuu acucuuuacaauguuucu auaacauuguaaagcgcuucuuucgcgguugggcuggagcaacucuuuacaauguuucu chr6:27147628..27147687:+
chr17_2296 -1.8 0.00 ± 0.02 TRUE 4 4 0 0 yes hsa-miR-497-5p blast cagcagcacacugugguuugu aacccaccccgguccugcuccc aacccaccccgguccugcucccgccccagcagcacacugugguuugu chr17:7017978..7018025:-
chr12_1779 -1.9 0.00 ± 0.02 STAR 3 3 0 0 yes hsa-miR-141-5p blast uaacacugucugguaaagaug ucuuccaguacaguguugga ucuuccaguacaguguuggauggucuaauugugaagcuccuaacacugucugguaaagaug chr12:6964114..6964175:+
chr12_1790 -1.9 0.00 ± 0.02 TRUE 3 3 0 0 yes hsa-miR-196a-5p blast uagguaguuucauguuguugg ggcaacaagaaacugccugag uagguaguuucauguuguugggauugaguuuugaacucggcaacaagaaacugccugag chr12:53991761..53991820:+
chr19_2467 -1.9 0.00 ± 0.02 TRUE 172 172 0 0 no hsa-let-7e-5p blast ugagguaggagguuguauaguu cuguccaccugccgcgcc cuguccaccugccgcgccccccgggcugagguaggagguuguauaguu chr19:51692766..51692814:+
chr17_2252 -1.9 0.00 ± 0.02 TRUE 22 22 0 0 no hsa-miR-5010-5p blast agggggauggcagagcaaaauu uuuugugucucccauuccccaga agggggauggcagagcaaaauucauggccuacagcugccucuugccaaacugcacuggauuuugugucucccauuccccaga chr17:42514207..42514289:+
chr8_1219 -2.0 0.00 ± 0.02 STAR 3 3 0 0 yes hsa-miR-4659a-5p blast ucuucuuagacauggcaac ugccaugucuaagaagaaa ugccaugucuaagaagaaaacuuuggagaaaaauuuucuucuuagacauggcaac chr8:6745177..6745232:+
chr10_1491 -2.0 0.00 ± 0.02 STAR 1 1 0 0 yes hsa-miR-3158-5p blast aagggcuuccucucugcagg ugcagagaggaagcccuucu ugcagagaggaagcccuucugcuuacagguauuggaagggcuuccucucugcagg chr10:101601430..101601485:+
chr11_1741 -2.0 0.00 ± 0.02 STAR 2 2 0 0 yes hsa-miR-3920 blast ucagagaguuaagagaauuagu ugauuaucuuaacucucugacc ucagagaguuaagagaauuaguacaggugagauuguacugauuaucuuaacucucugacc chr11:101519831..101519891:-
chrX_2822 -2.0 0.00 ± 0.02 STAR 4 4 0 0 yes hsa-miR-542-5p blast uugugacagauugauaacuga ggggaucaucaugucacgaga ggggaucaucaugucacgagauaccagugugcacuugugacagauugauaacuga chrX:134541365..134541420:-
chr19_2486 -2.0 0.00 ± 0.02 STAR 3 3 0 0 yes hsa-miR-3940-5p blast cagcccggaucccagcccacu uggguuggggcgggcucug uggguuggggcgggcucuggggauuuggucucacagcccggaucccagcccacu chr19:6416434..6416488:-
chr10_1562 -2.1 0.01 ± 0.04 STAR 1 1 0 0 yes hsa-miR-3158-5p blast aagggcuuccucucugcagg ugcagagaggaagcccuucc ugcagagaggaagcccuuccaauaccuguaagcagaagggcuuccucucugcagg chr10:101601428..101601483:-
chr2_328 -2.1 0.01 ± 0.04 TRUE 3 3 0 0 yes hsa-miR-3679-5p blast ugaggauauggcagggaaggg cuuccccccaguaaucuucauc ugaggauauggcagggaaggggaguuucccucuauucccuuccccccaguaaucuucauc chr2:134127129..134127189:+
chr2_403 -2.2 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-4433b-5p blast augucccacccccacuccuguu caggaguggggggugggacguaa augucccacccccacuccuguuugaauauuucaccagaaacaggaguggggggugggacguaa chr2:64340766..64340829:-
chr16_2144 -2.2 0.01 ± 0.04 TRUE 11 11 0 0 no hsa-miR-484 blast ucaggcucaguccccucccga ggggggugacccuggcu ucaggcucaguccccucccgauaaaccccuaaauagggacuuucccggggggugacccuggcu chr16:15643300..15643363:+
chr11_1761 -2.3 0.01 ± 0.04 TRUE 3 3 0 0 yes hsa-miR-125b-5p blast ucccugagacccuaacuugu ggguuaggcucuugggagcu ucccugagacccuaacuugugauguuuaccguuuaaauccacggguuaggcucuugggagcu chr11:122099768..122099830:-
chr19_2464 -2.3 0.01 ± 0.04 TRUE 2 2 0 0 yes hsa-miR-769-5p blast ugagaccucuggguucugagcu cugggaucuccggggucuuggu ugagaccucuggguucugagcugugauguugcucucgagcugggaucuccggggucuuggu chr19:46018960..46019021:+
chr17_2366 -2.3 0.01 ± 0.04 STAR 2 2 0 0 yes hsa-miR-338-5p blast uccagcaucagugauuuuguu caauauccuggugcugagu caauauccuggugcugagugaugacucaggcgacuccagcaucagugauuuuguu chr17:81125887..81125942:-
chr14_1998 -2.4 0.01 ± 0.04 TRUE 3 3 0 0 yes hsa-miR-655-5p blast agagguuauccguguuauguuc auaauacaugguuaaccucuuu agagguuauccguguuauguucgcuucauucaucaugaauaauacaugguuaaccucuuu chr14:101049571..101049631:+
chr7_1145 -2.4 0.01 ± 0.04 TRUE 10 10 0 0 no hsa-miR-148a-3p blast ucagugcacuacagaacuuugu agaggcuguggucgccgaug ucagugcacuacagaacuuugucucuagaggcuguggucgccgaug chr7:25949897..25949943:-
chrX_2743 -2.5 0.01 ± 0.04 STAR 3 3 0 0 yes hsa-miR-1277-5p blast uacguagauauauauguauu uauauauauauguacguaug uauauauauauguacguauguguauauaaauguauacguagauauauauguauu chrX:118386405..118386459:+
chr21_2604 -2.5 0.01 ± 0.04 TRUE 3 3 0 0 yes hsa-miR-125b-5p blast ucccugagacccuaacuugu aagucaggcucuugggacc ucccugagacccuaacuugugagguauuuuaguaacaucacaagucaggcucuugggacc chr21:16590252..16590312:+
chr9_1384 -2.5 0.01 ± 0.04 TRUE 2 2 0 0 yes hsa-miR-6877-5p blast uucagggccgaaggguggaagc cucugcccuuggccuccccag uucagggccgaaggguggaagcugcuggugcucaucucagccucugcccuuggccuccccag chr9:133051997..133052059:+
chr11_1715 -2.5 0.01 ± 0.04 TRUE 2 2 0 0 yes hsa-miR-6750-5p blast agggaacagcugggugagcu cucacccucugcucccagc agggaacagcugggugagcugcugccccagaggcccagcagguguccagaacucacccucugcucccagc chr11:64898361..64898431:-
chr14_1991 -2.5 0.01 ± 0.04 STAR 2 2 0 0 yes hsa-miR-299-5p blast guaugugggaugguaaaccgcu ugguuuaccgucccacauacau ugguuuaccgucccacauacauuuugaauauguaugugggaugguaaaccgcu chr14:101023799..101023852:+
chr11_1652 -2.6 0.01 ± 0.04 TRUE 2 2 0 0 yes hsa-miR-34b-5p blast uaggcagugucauuagcugauug aucacuaacuccacugccauca uaggcagugucauuagcugauuguacuguggugguuacaaucacuaacuccacugccauca chr11:111512949..111513010:+
chr11_1598 -2.6 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-610 blast ugagcuaaaugugugcugggac cccagcacacauuuagcucaca ugagcuaaaugugugcugggacacauuugagccaaaugucccagcacacauuuagcucaca chr11:28056829..28056890:+
chr17_2339 -2.6 0.01 ± 0.04 TRUE 3 3 0 0 yes hsa-miR-196a-5p blast uagguaguuucauguuguugg aacaacauuaaaccacccgau uagguaguuucauguuguugggccuggguuucugaacacaacaacauuaaaccacccgau chr17:48632493..48632553:-
chr19_2471 -2.6 0.01 ± 0.04 TRUE 2 2 0 0 yes hsa-miR-643 blast acuuguaugcuagcucaggu cugagcuagaauacaaguag cugagcuagaauacaaguaguuggcgucuucagagacacuuguaugcuagcucaggu chr19:52281819..52281876:+
chr17_2340 -2.7 0.01 ± 0.04 TRUE 3 3 0 0 yes hsa-miR-196a-5p blast uagguaguuucauguuguugg gaauuggaacugcugagu gaauuggaacugcugagugaauuagguaguuucauguuguugg chr17:48632532..48632575:-
chrX_2816 -2.7 0.01 ± 0.04 STAR 2 2 0 0 yes hsa-miR-19b-2-5p blast ugugcaaauccaugcaaaacuga aguuuugcagguuugcauuuc aguuuugcagguuugcauuucagcguauauauguauauguggcugugcaaauccaugcaaaacuga chrX:134169682..134169748:-
chr11_1691 -2.7 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-610 blast ugagcuaaaugugugcugggac cccagcacacauuuagcucacc ugagcuaaaugugugcugggacauuuggcucaaaugugucccagcacacauuuagcucacc chr11:28056827..28056888:-
chr13_1891 -2.8 0.01 ± 0.04 STAR 2 2 0 0 yes hsa-miR-19b-1-5p blast ugugcaaauccaugcaaaacuga aguuuugcagguuugcauccagc aguuuugcagguuugcauccagcugugugauauucugcugugcaaauccaugcaaaacuga chr13:91351206..91351267:+
chr14_1995 -2.8 0.01 ± 0.04 STAR 3 3 0 0 yes hsa-miR-376b-5p blast aucauagaggaaaauccauguu cguggauauuccuucuauguuua cguggauauuccuucuauguuuacgugauuccugguuaaucauagaggaaaauccauguu chr14:101040458..101040518:+
chr22_2680 -2.8 0.01 ± 0.04 STAR 1 1 0 0 yes hsa-miR-3928-5p blast ggaggaaccuuggagcuucgg gaagcucuaagguuccgccugc gaagcucuaagguuccgccugcgggcaggaagcggaggaaccuuggagcuucgg chr22:31160062..31160116:-
chr7_1180 -2.9 0.01 ± 0.04 STAR 3 3 0 0 yes hsa-miR-653-5p blast uucacuggaguuuguuucaau ugaaacaaucucuacugaacc ugaaacaaucucuacugaaccagcuucaaacaaguucacuggaguuuguuucaau chr7:93482784..93482839:-
chr5_907 -2.9 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-218-5p blast uugugcuugaucuaaccaugugg acaugguucugucaagcaccgcg uugugcuugaucuaaccaugugguggaacgauggaaacggaacaugguucugucaagcaccgcg chr5:168768167..168768231:-
chr17_2278 -2.9 0.01 ± 0.04 TRUE 4 4 0 0 yes hsa-miR-6516-5p blast uuugcaguaacaggugugagca aucauguaugauacugcaaaca uuugcaguaacaggugugagcauucuagcagcaguuugaugaucauguaugauacugcaaaca chr17:77089427..77089490:+
chr20_2569 -2.9 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-6813-5p blast caggggcugggguuucagguuc accuuggccccucuccccagac caggggcugggguuucagguucucagucagaaccuuggccccucuccccagac chr20:64076952..64077005:-
chr11_1616 -2.9 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-129-5p blast cuuuuugcggucugggcuugc aagcccuuaccccaaaaagca cuuuuugcggucugggcuugcuguacauaacucaauagccggaagcccuuaccccaaaaagca chr11:43581407..43581470:+
chr1_166 -3.0 0.01 ± 0.04 TRUE 10 6 0 4 no hsa-miR-3605-5p blast ugaggauggauagcaaggaag ccuccguguuaccuguccuc ugaggauggauagcaaggaagccgcucccaccugacccucacggccuccguguuaccuguccuc chr1:33332407..33332471:-
chr17_2292 -3.0 0.01 ± 0.04 STAR 1 1 0 0 yes hsa-miR-132-5p blast uaacagucuacagccauggucgc aaccguggcuuucgauuguuacu aaccguggcuuucgauuguuacugugggaacuggagguaacagucuacagccauggucgc chr17:2049927..2049987:-
chrX_2786 -3.0 0.01 ± 0.04 STAR 1 1 0 0 yes hsa-miR-374b-5p blast cuuagcagguuguauuaucauu auauaauacaaccugcuaagug auauaauacaaccugcuaaguguccuagcacuuagcagguuguauuaucauu chrX:74218556..74218608:-
chrX_2723 -3.0 0.01 ± 0.04 STAR 2 2 0 0 yes hsa-miR-676-5p blast cuguccuaagguuguugaguu cucuucaaccucaggacuugca cucuucaaccucaggacuugcagaauuaauggaaugcuguccuaagguuguugaguu chrX:70022862..70022919:+
chrX_2831 -3.0 0.01 ± 0.04 TRUE 1 1 0 0 yes hsa-miR-224-5p blast caagucacuagugguuccguuuagu aaaauggugcccuagugacuacaa caagucacuagugguuccguuuaguagaugauugugcauuguuucaaaauggugcccuagugacuacaa chrX:151958582..151958651:-
chrX_2712 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-362-5p blast aauccuuggaaccuaggugu accuauucaaggauuca aauccuuggaaccuaggugugagugcuauuucagugcaacacaccuauucaaggauuca chrX:50008967..50009026:+
chr14_2010 -3.1 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-369-5p blast agaucgaccguguuauauucg aauaauacaugguugaucuuu agaucgaccguguuauauucgcuuuauugacuucgaauaauacaugguugaucuuu chr14:101065605..101065661:+
chr7_1110 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-129-5p blast cuuuuugcggucugggcuugc aagcccuuaccccaaaaagua cuuuuugcggucugggcuugcuguuccucucaacaguagucaggaagcccuuaccccaaaaagua chr7:128207875..128207940:+
chr10_1494 -3.1 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-146b-5p blast ugagaacugaauuccauaggcugu ugcccuguggacucaguucuggu ugagaacugaauuccauaggcugugagcucuagcaaugcccuguggacucaguucuggu chr10:102436519..102436578:+
chr7_1188 -3.2 0.00 ± 0.00 TRUE 72 72 0 0 no hsa-miR-106b-5p blast uaaagugcugacagugcaga cccaccucccgcuccagc cccaccucccgcuccagcccugccggggcuaaagugcugacagugcaga chr7:100094043..100094092:-
chr19_2475 -3.2 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-517-5p blast aucgugcaucccuuuagagug cucuagauggaagcacugucu cucuagauggaagcacugucuguuguauaaaagaaaagaucgugcaucccuuuagagug chr19:53712282..53712341:+
chr13_1888 -3.3 0.00 ± 0.00 TRUE 49 49 0 0 no hsa-miR-18a-5p blast uaaggugcaucuagugcaga ugcccuaagugcuccuucuggc uaaggugcaucuagugcagauagugaaguagauuagcaucuacugcccuaagugcuccuucuggc chr13:91350755..91350820:+
chr4_634 -3.3 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-218-5p blast uugugcuugaucuaaccaugugg acaugguuccgucaagcaccaug uugugcuugaucuaaccaugugguugcgagguaugaguaaaacaugguuccgucaagcaccaug chr4:20528298..20528362:+
chr3_513 -3.4 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-4446-5p blast cagggcuggcagugacaugggu ccauuucccugccauucccuuggc ccauuucccugccauucccuuggcuucaauuuacucccagggcuggcagugacaugggu chr3:113594880..113594939:+
chr11_1765 -3.4 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-100-5p blast aacccguagauccgaacuugu aagcuuguaucuauagguaug aacccguagauccgaacuugugguauuaguccgcacaagcuuguaucuauagguaug chr11:122152239..122152296:-
chr19_2448 -3.5 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-5589-5p blast ggcugggugcucuugugcagu ugcacauggcaaccuagcucc ggcugggugcucuugugcagugagcaaccuacacaacugcacauggcaaccuagcucc chr19:10038353..10038411:+
chr14_1990 -3.6 0.00 ± 0.00 TRUE 2 2 0 0 yes hsa-miR-411-5p blast uaguagaccguauagcguac auguaacacgguccacuaac uaguagaccguauagcguacgcuuuaucugugacguauguaacacgguccacuaac chr14:101023339..101023395:+
chr14_1993 -3.6 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-376c-5p blast aacauagaggaaauuccacgu guggauauuccuucuauguuua guggauauuccuucuauguuuauguuauuuaugguuaaacauagaggaaauuccacgu chr14:101039694..101039752:+
chr20_2512 -3.6 0.00 ± 0.00 TRUE 7 7 0 0 no hsa-miR-1292-5p blast ugggaacggguuccggcagac ccccggcucccguuccaggu ugggaacggguuccggcagacgcugagguugcguugacgcucgcgccccggcucccguuccaggu chr20:2652778..2652843:+
chr7_1147 -3.7 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-196b-5p blast uagguaguuuccuguuguugg gacagcacgacacugccuuca uagguaguuuccuguuguugggauccaccuuucucucgacagcacgacacugccuuca chr7:27169491..27169549:-
chr19_2477 -3.8 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-517-5p blast aucgugcaucccuuuagagug cucuagauggaagcacugucu cucuagauggaagcacugucuguugucuaagaaaagaucgugcaucccuuuagagug chr19:53721081..53721138:+
chr3_477 -4.0 0.00 ± 0.00 STAR 7 7 0 0 no hsa-miR-128-2-5p blast ucacagugaaccggucucuuu gggggccgauacacuguacgaga gggggccgauacacuguacgagagugaguagcaggucucacagugaaccggucucuuu chr3:35744489..35744547:+
chr7_1186 -4.0 0.00 ± 0.00 TRUE 6494 6494 0 0 no hsa-miR-93-5p blast caaagugcuguucgugcaggu cugugcuacagaccuuccuu cugugcuacagaccuuccuuucuguccucccgucuuggaccucaguccugggggcuccaaagugcuguucgugcaggu chr7:100093816..100093894:-
chr19_2443 -4.0 0.00 ± 0.00 TRUE 73 73 0 0 no hsa-miR-7-5p blast uggaagacuagugauuuuguugu auuagaguggcuguggucuagugcu auuagaguggcuguggucuagugcuguguggaagacuagugauuuuguugu chr19:4770671..4770722:+
chr17_2352 -4.2 0.00 ± 0.00 STAR 1 1 0 0 yes hsa-miR-301a-5p blast cagugcaauaguauugucaaagc ucugacuuuauugcacuacu ucugacuuuauugcacuacuguacuuuacagcuagcagugcaauaguauugucaaagc chr17:59151148..59151206:-
chr7_1159 -4.2 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-4657 blast aauguggaaguggucugagg caagaacacuaccauauaug aauguggaaguggucugaggcauauagaguauaugccaagaacacuaccauauaug chr7:44881744..44881800:-
chr4_667 -4.4 0.00 ± 0.00 TRUE 6 6 0 0 yes hsa-miR-576-5p blast auucuaauuucuccacgucuuug aaguaacugcaccauuuuacaaucc aaguaacugcaccauuuuacaauccaacgaggauucuaauuucuccacgucuuug chr4:109488680..109488735:+
chr1_221 -4.6 0.00 ± 0.00 TRUE 4 3 0 1 no hsa-miR-1843 blast uauggaggucucugucuggcu ucugaucguuccccuccguacagc uauggaggucucugucuggcuuaggacagcuggcuaagucugaucguuccccuccguacagc chr1:175968397..175968459:-
chr12_1798 -4.8 0.00 ± 0.00 TRUE 1 1 0 0 yes hsa-miR-10527-5p blast aaagcaaauguugggugaacgg augcaccuuacucuugcuggua aaagcaaauguugggugaacggcuguuuccucuuauucaagccaugcaccuuacucuugcuggua chr12:63823662..63823727:+
chr21_2619 -4.8 0.00 ± 0.00 TRUE 6 6 0 0 no hsa-miR-6815-5p blast agguggcgccggaggaguc cgucugccgccucg cgucugccgccucguggggacuuggagcguggggugcauuuccauguagacacuguagguggcgccggaggaguc chr21:45478215..45478290:+
chr21_2620 -5.0 0.00 ± 0.00 TRUE 6 6 0 0 no hsa-miR-6815-5p blast agguggcgccggaggaguc cuucucuugcacacccag agguggcgccggaggagucauuucccaucacuaauggcuucucuugcacacccag chr21:45478271..45478326:+
chr9_1359 -5.1 0.00 ± 0.00 TRUE 26450 26450 0 0 no hsa-let-7a-5p blast ugagguaguagguuguauag gugauuccuuuucaccauucacc gugauuccuuuucaccauucacccuggauguucucuucacugugggaugagguaguagguuguauag chr9:94175914..94175981:+
chr5_823 -5.3 0.00 ± 0.00 TRUE 15 15 0 0 no hsa-miR-1294 blast ugugagguuggcauuguugu uucauuuaugaucucaccga uucauuuaugaucucaccgaguccugugagguuggcauuguugu chr5:154347128..154347172:+
chr19_2437 -5.9 0.00 ± 0.00 STAR 2 2 0 0 no hsa-miR-3187-5p blast uuggccauggggcugcgcgg gggcagcguguggcugaagg gggcagcguguggcugaaggucaccauguucuccuuggccauggggcugcgcgg chr19:813592..813646:+
chr16_2147 -6.1 0.00 ± 0.00 STAR 2 2 0 0 no hsa-miR-6511b-5p blast ccucaccaucccuucugccugca caggcagaaguggggcugacagg caggcagaaguggggcugacagggcagaggguugcgcccccucaccaucccuucugccugca chr16:16368879..16368941:+
chr16_2145 -6.1 0.00 ± 0.00 STAR 2 2 0 0 no hsa-miR-6511b-5p blast ccucaccaucccuucugccugca caggcagaaguggggcugacagg caggcagaaguggggcugacagggcagaggguugcgcccccucaccaucccuucugccugca chr16:16324591..16324653:+
chr16_2206 -6.1 0.00 ± 0.00 STAR 2 2 0 0 no hsa-miR-6511b-5p blast ccucaccaucccuucugccugca caggcagaaguggggcugacagg caggcagaaguggggcugacagggcagaggguugcgcccccucaccaucccuucugccugca chr16:18344013..18344075:-
chr16_2141 -6.1 0.00 ± 0.00 STAR 2 2 0 0 no hsa-miR-6511b-5p blast ccucaccaucccuucugccugca caggcagaaguggggcugacagg caggcagaaguggggcugacagggcagaggguugcgcccccucaccaucccuucugccugca chr16:14925940..14926002:+
chr9_1365 -6.7 0.00 ± 0.00 STAR 2 2 0 0 no hsa-miR-23b-5p blast aucacauugccagggauuacc ggguuccuggcaugcugauuu ggguuccuggcaugcugauuugugacuuaagauuaaaaucacauugccagggauuacc chr9:95085227..95085285:+
chr2_457 -6.9 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-6809-5p blast uggcaaggaaagaagaggau ucucuggugugcuccuccugccauc uggcaaggaaagaagaggaucauguuugcccccguggacagcucucuggugugcuccuccugccauc chr2:217900556..217900623:-
chr22_2650 -6.9 0.00 ± 0.00 TRUE 2 2 0 0 no hsa-miR-1306-5p blast ccaccuccccugcaaacgucca gacguuggcucugguggugaug ccaccuccccugcaaacguccaguggugcagagguaauggacguuggcucugguggugaug chr22:20086071..20086132:+
chr5_892 -7.0 0.00 ± 0.00 STAR 1 1 0 0 no hsa-miR-874-5p blast ugcccuggcccgagggaccgacu gcggccccacgcaccaggguaag gcggccccacgcaccaggguaagagagacucucgcuuccugcccuggcccgagggaccgacu chr5:137647579..137647641:-
chr20_2563 -7.0 0.00 ± 0.00 STAR 5 5 0 0 no hsa-miR-1972 blast ugagguaguaguuuguguc ccaggcacaguggcucacg ugagguaguaguuugugucuuucaagaaauugguucaggccaggcacaguggcucacg chr20:56031224..56031282:-
chr1_36 -7.1 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-6735-5p blast cagggcagagggcacaggaau gccuguggcuccucccucagga cagggcagagggcacaggaaucugaggugacuggcacagaagacucaggccuguggcuccucccucagga chr1:43448543..43448613:+
chr16_2187 -7.1 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-11401 blast ucacgucugcggcugucacg aggcgcugcggagacacugagc aggcgcugcggagacacugagcacugcccucgcggcugucacgucugcggcugucacg chr16:87853867..87853925:+
chr2_327 -7.3 0.00 ± 0.00 TRUE 3 3 0 0 no hsa-miR-3679-5p blast ugaggauauggcagggaaggg cuuuccuguaauuuuuuagagcacc cuuuccuguaauuuuuuagagcaccuaguuagaggccccacguggugaggauauggcagggaaggg chr2:134127084..134127150:+
chr2_387 -7.5 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-4429 blast aaaagcugggcugagaggc ccacagccacagcucagcc aaaagcugggcugagaggcgacuggugucuaauuuguuugucucuccaacucagacugccuggcccacagccacagcucagcc chr2:11540588..11540671:-
chr10_1557 -7.5 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-1287-5p blast ugcuggaucagugguucgag cuagccacagaugcagugau ugcuggaucagugguucgagucugagccuuuaaaagccacucuagccacagaugcagugau chr10:98395231..98395292:-
chr14_2003 -7.8 0.00 ± 0.00 TRUE 5 5 0 0 no hsa-miR-154-5p blast uagguuauccguguugccuucg gaggccaacuuuggagaacaggcauu gaggccaacuuuggagaacaggcauugacauugggucugcgcuagcgugugguacuugaagauagguuauccguguugccuucg chr14:101059706..101059790:+
chr4_633 -8.8 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-218-5p blast uugugcuugaucuaaccaugugg uagugguugguguagugauaauguagcg uagugguugguguagugauaauguagcgagauuuucuguugugcuugaucuaaccaugugg chr4:20528260..20528321:+
chr13_1885 -9.4 0.00 ± 0.00 TRUE 117 117 0 0 no hsa-miR-17-5p blast caaagugcuuacagugcagguag ccuuguaaaacugaagauugugac ccuuguaaaacugaagauugugaccagucagaauaaugucaaagugcuuacagugcagguag chr13:91350578..91350640:+
chr19_2476 -1.0e+1 0.00 ± 0.00 TRUE 1 1 0 0 no hsa-miR-517b-3p blast aucgugcaucccuuuagagug cguugaagaugcugcugaucu aucgugcaucccuuuagaguguuacuguuugagacaagcaacguugaagaugcugcugaucu chr19:53712320..53712382:+
chrX_2813 -1.0e+1 0.00 ± 0.00 TRUE 161 161 0 0 no hsa-miR-92a-3p blast uauugcacuugucccggccugu aagccguaaguucugauauu uauugcacuugucccggccuguggaagaaaggaggauuuuuaucgucuucuuauuuuaacuuuuaaaagccguaaguucugauauu chrX:134169479..134169565:-
chr11_1764 -1.1e+1 0.00 ± 0.00 TRUE 26453 26453 0 0 no hsa-let-7a-5p blast ugagguaguagguuguauag guaauuucccugcuuaagaa guaauuucccugcuuaagaaaugguaguuuuccagccauugugacugcaugcucccagguugagguaguagguuguauag chr11:122146569..122146649:-
chrX_2713 -1.3e+1 0.00 ± 0.00 TRUE 69 69 0 0 yes hsa-miR-660-5p blast uacccauugcauaucggaguugu cccucccaugugcagaagaauga cccucccaugugcagaagaaugaacugcuccuucucccauacccauugcauaucggaguugu chrX:50013216..50013278:+


mature miRBase miRNAs not detected by miRDeep2


miRBase precursor idClicking this field will display a pdf of the structure and read signature of the miRNA. total read countthis is the sum of read counts for the mature and star miRNAs. mature read count(s)this is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the mature miRNA, including 2 nts upstream and 5 nts downstream. If more than one mature sequence is given this will be a comma separated list. In parenthesis are normalized read counts shown. star read countthis is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the star miRNA, including 2 nts upstream and 5 nts downstream. This field is empty unless a reference star miRNA was given as input to quantifier.pl. If more than one mature sequence is given this will be a comman separated list remaining readsthis is the number of reads that did not map to any of the mature and star sequences UCSC browserif a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the miRNA precursor sequence against the reference genome. NCBI blastnclicking this field will initiate a NCBI blastn search of the miRNA precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences). miRBase mature sequence(s)this is/are the mature miRNA sequence(s) input to quantifier.pl. miRBase star sequence(s)this is/are the star miRNA sequence(s) input to quantifier.pl. This field is empty unless a reference star miRNA was given as input to quantifier.pl. miRBase precursor sequencethis is the precursor miRNA sequence input to quantifier.pl.
hsa-mir-142 1658 1652
0
 6 - blast
cauaaaguagaaagcacuacu
uguaguguuuccuacuuuaugga
-
gacagugcagucacccauaaaguagaaagcacuacuaacagcacuggaggguguaguguuuccuacuuuauggaugaguguacugug
hsa-mir-451a 689 685
0
 4 - blast
aaaccguuaccauuacugaguu
-
cuugggaauggcaaggaaaccguuaccauuacugaguuuaguaaugguaaugguucucuugcuauacccaga
hsa-mir-320d-2 45 45
0
 0 - blast
aaaagcuggguugagagga
-
uaucaauaagccuucucuucccaguucuucuuggagucaggaaaagcuggguugagaggagcagaaaagaaa
hsa-mir-1255b-2 25 25
0
 0 - blast
cggaugagcaaagaaagugguu
aaccacuuucuuugcucaucca
-
ucuuacggaugagcaaagaaagugguuugcgccucaagaaaccacuuucuuugcucauccauaagga
hsa-mir-99b 18 18
0
 0 - blast
caagcucgugucuguggguccg
cacccguagaaccgaccuugcg
-
ggcacccacccguagaaccgaccuugcggggccuucgccgcacacaagcucgugucuguggguccguguc
hsa-mir-1246 16 16
0
 0 - blast
aauggauuuuuggagcagg
-
uguauccuugaauggauuuuuggagcaggaguggacaccugacccaaaggaaaucaauccauaggcuagcaau
hsa-mir-195 10 10
0
 0 - blast
ccaauauuggcugugcugcucc
uagcagcacagaaauauuggc
-
agcuucccuggcucuagcagcacagaaauauuggcacagggaagcgagucugccaauauuggcugugcugcuccaggcaggguggug
hsa-mir-106a 8 8
0
 0 - blast
aaaagugcuuacagugcagguag
cugcaauguaagcacuucuuac
-
ccuuggccauguaaaagugcuuacagugcagguagcuuuuugagaucuacugcaauguaagcacuucuuacauuaccaugg
hsa-mir-4804 6 6
0
 0 - blast
uuggacgguaagguuaagcaa
ugcuuaaccuugcccucgaaa
-
ucaguguauuuggacgguaagguuaagcaaggugcgucguaucuugcuuaaccuugcccucgaaauacacuga
hsa-mir-4508 6 6
0
 0 - blast
gcggggcugggcgcgcg
-
aggacccagcggggcugggcgcgcggagcagcgcugggugcagcgccugcgccggcagcugcaagggccg
hsa-mir-1290 6 6
0
 0 - blast
uggauuuuuggaucaggga
-
gagcgucacguugacacucaaaaaguuucagauuuuggaacauuucggauuuuggauuuuuggaucagggaugcucaa
hsa-mir-3613 6 6
0
 0 - blast
acaaaaaaaaaagcccaacccuuc
uguuguacuuuuuuuuuuguuc
-
ugguuggguuuggauuguuguacuuuuuuuuuuguucguugcauuuuuaggaacaaaaaaaaaagcccaacccuucacaccacuuca
hsa-mir-664a 7 7
0
 0 - blast
uauucauuuauccccagccuaca
acuggcuagggaaaaugauuggau
-
gaacauugaaacuggcuagggaaaaugauuggauagaaacuauuauucuauucauuuauccccagccuacaaaaugaaaaaa
hsa-mir-3960 11 5
0
 6 - blast
ggcggcggcggaggcggggg
-
ggcgccccggcuccccgcgcccccgaucggggccgccgcuaguaguggcggcggcggaggcgggggcagcggcggcggcggcggaggcgcc
hsa-mir-6833 5 5
0
 0 - blast
uuucucucuccacuuccucag
guguggaagaugggaggagaaa
-
aaacgguguggaagaugggaggagaaaaaucccuguuaacuuucucucuccacuuccucag
hsa-mir-941-5 5 5
0
 0 - blast
cacccggcugugugcacaugugc
-
ugugcacaugugcccagggcccgggacagcgccacggaagaggacgcacccggcugugugcacaugugccca
hsa-mir-32 10 8
0
 2 - blast
uauugcacauuacuaaguugca
caauuuagugugugugauauuu
-
ggagauauugcacauuacuaaguugcauguugucacggccucaaugcaauuuagugugugugauauuuuc
hsa-mir-548d-2 16 16
0
 0 - blast
aaaaguaauugugguuuuug
aaaaguaauugugguuuuug
caaaaaccacaguuucuuuugc
aaaaguaauugugguuuuugc
aaaaguaauugugguuuuugcc
-
gagagggaagauuuagguuggugcaaaaguaauugugguuuuugccauugaaaguaauggcaaaaaccacaguuucuuuugcaccaaccuaauaaaa
hsa-mir-4488 4 4
0
 0 - blast
agggggcgggcuccggcg
-
gguagggggcgggcuccggcgcugggaccccacuaggguggcgccuuggccccgccccgccc
hsa-mir-376a-2 4 4
0
 0 - blast
aucauagaggaaaauccacgu
gguagauuuuccuucuauggu
-
gguauuuaaaagguagauuuuccuucuaugguuacguguuugaugguuaaucauagaggaaaauccacguuuucaguauc
hsa-mir-1303 3 3
0
 0 - blast
uuuagagacggggucuugcucu
-
ggcugggcaacauagcgagaccucaacucuacaauuuuuuuuuuuuuaaauuuuagagacggggucuugcucuguugccaggcuuu
hsa-mir-320e 3 3
0
 0 - blast
aaagcuggguugagaagg
-
cuccauggggccuucucuucccaguucuuccuggagucggggaaaagcuggguugagaaggugaaaagaaaaa
hsa-mir-92b 6 6
0
 0 - blast
agggacgggacgcggugcagug
uauugcacucgucccggccucc
-
cgggccccgggcgggcgggagggacgggacgcggugcaguguuguuuuuucccccgccaauauugcacucgucccggccuccggcccccccggccc
hsa-mir-6779 2 2
0
 0 - blast
cugggaggggcuggguuuggc
aagcccugucuccucccaucu
-
gagcucugggaggggcuggguuuggcaggacaguuuccaagcccugucuccucccaucuuccag
hsa-mir-6884 2 2
0
 0 - blast
agaggcugagaaggugauguug
cccaucaccuuuccgucuccccu
-
cccgcagaggcugagaaggugauguuggcucaagaaagggagauagaugguagcccaucaccuuuccgucuccccuag
hsa-mir-1299 2 2
0
 0 - blast
uucuggaauucugugugaggga
-
ccucauggcaguguucuggaauccuacgugagggacaaucauucagacccacguagcaguguucuggaauucugugugaggga
hsa-mir-1224 2 2
0
 0 - blast
gugaggacucgggaggugg
ccccaccuccucucuccucag
-
gugaggacucgggagguggaggguggugccgccggggccgggcgcuguuucagcucgcuucuccccccaccuccucucuccucag
hsa-mir-6885 1 1
0
 0 - blast
cuuugcuuccugcuccccuag
aggggggcacugcgcaagcaaagcc
-
ccuggaggggggcacugcgcaagcaaagccagggacccugagaggcuuugcuuccugcuccccuag
hsa-mir-766 1 1
0
 0 - blast
aggaggaauuggugcuggucuu
acuccagccccacagccucagc
-
gcauccucaggaccugggcuugggugguaggaggaauuggugcuggucuuucauuuuggauuugacuccagccccacagccucagccaccccagccaauugucauaggagc
hsa-mir-4510 1 1
0
 0 - blast
ugagggaguaggauguaugguu
-
guguaugugagggaguaggauguaugguuguuagauagacaacuacaaucuuuucucacaacagacag
hsa-mir-1285-2 1 1
0
 0 - blast
ucugggcaacaaagugagaccu
-
uuugggaggccgaggcuggugcaucacuugagcccagcaauuugagaccaaucugggcaacaaagugagaccuccgucucuacaaaga
hsa-mir-6130 1 1
0
 0 - blast
ugagggaguggauuguaug
-
caaugaauguggaaaugcaggcaucccuucuauauacugauguaauuuuccuuggauuuauaugcaguacugagggaguggauuguaugguaguucuauuuuuacauuu
hsa-mir-147b 1 1
0
 0 - blast
gugugcggaaaugcuucugcu
uggaaacauuucugcacaaacu
-
uauaaaucuaguggaaacauuucugcacaaacuagauucuggacaccagugugcggaaaugcuucugcuacauuuuuagg
hsa-mir-8485 5 0
0
 5 - blast
cacacacacacacacacguau
-
ucugugauauacguguguguguguguguauauagcauauguguauacauacacacacacacacacacacacacacacacacacacacguau
hsa-mir-376a-1 4 4
0
 0 - blast
guagauucuccuucuaugagua
aucauagaggaaaauccacgu
-
uaaaagguagauucuccuucuaugaguacauuauuuaugauuaaucauagaggaaaauccacguuuuc
hsa-mir-3149 3 0
0
 3 - blast
uuuguauggauauguguguguau
-
auacauacauguacacacacaugucauccacacacauacauauauauauguuuguauggauauguguguguauguguguguau
hsa-mir-30c-1 16 16
0
 0 - blast
uguaaacauccuacacucucagc
cugggagaggguuguuuacucc
-
accaugcuguaguguguguaaacauccuacacucucagcugugagcucaagguggcugggagaggguuguuuacuccuucugccaugga
hsa-mir-558 10 0
0
 10 - blast
ugagcugcuguaccaaaau
-
gugugugugugugugugugguuauuuugguauaguagcucuagacucuauuauaguuuccugagcugcuguaccaaaauaccacaaacgggcug
hsa-mir-1273c 5 0
0
 5 - blast
ggcgacaaaacgagacccuguc
-
ugcagccugggcgacaaaacgagacccugucuuuuuuuuuuucugagacagagucucguucuguugcccaagcugga
hsa-mir-1285-1 1 1
0
 0 - blast
ucugggcaacaaagugagaccu
gaucucacuuuguugcccagg
-
uguagagauaggaucucacuuuguugcccaggcuggucucaaacuccuggucugggcaacaaagugagaccuuaucucuacaag
hsa-mir-12136 8 0
0
 8 - blast
gaaaaagucauggaggcc
-
gaaaaagucauggaggccaugggguuggcuugaaaccagcuuugggggguucgauuccuuccuuuuuuguc