Sample	picard_mark_duplicates-PERCENT_DUPLICATION	qualimap_rnaseq-reads_aligned	qualimap_rnaseq-reads_aligned_exonic
P1_DMSO_Control_A12toD12	88.2149	13.390422	5.925025
P1_DMSO_Control_A4toD4	92.2334	9.497881	3.8900059999999996
P1_DMSO_Control_A8toD8	86.2854	11.198195	5.020655
P1_DMSO_Control_E12toH12	89.5949	11.309645999999999	5.218662999999999
P1_DMSO_Control_E4toH4	88.4527	10.198197	4.505799
P1_DMSO_Control_E8toH8	88.6698	10.797945	4.909419
P1_MoA1_Pro_LC_A11toD11	85.9344	11.830748999999999	4.930124
P1_MoA1_Pro_LC_A3toD3	92.2625	10.303269	4.483751
P1_MoA1_Pro_LC_A7toD7	90.90700000000001	13.741002	5.856147
P1_MoA1_Pro_LC_E11toH11	91.94449999999999	14.471986999999999	6.901152
P1_MoA1_Pro_LC_E3toH3	86.4025	7.626323999999999	3.2362699999999998
P1_MoA1_Pro_LC_E7toH7	89.7662	12.546911999999999	5.696791999999999
P1_TC1_Imi_HC_A2toD2	90.0761	10.107006	4.355047
P1_TC1_Imi_HC_A6toD6	91.2368	10.568899	4.477067
P1_TC1_Imi_HC_E10toH10	86.6261	11.959042	5.344672
P1_TC1_Imi_HC_E2toH2	90.0231	8.612699	4.041589
P1_TC1_Imi_HC_E6toH6	89.385	9.604486	4.2519979999999995
P1_TC1_Imi_LC_A1toD1	89.4668	7.03074	3.186251
P1_TC1_Imi_LC_A5toD5	89.8262	9.992483	4.3541669999999995
P1_TC1_Imi_LC_A9toD9	89.2534	13.311606999999999	5.622485999999999
P1_TC1_Imi_LC_E1toH1	89.6569	5.927963	2.631237
P1_TC1_Imi_LC_E5toH5	90.2982	10.09072	4.498481
P2_DMSO_Control_A12toD12	87.2849	11.453455	5.083812
P2_DMSO_Control_A4toD4	91.4286	11.507373999999999	5.013921
P2_DMSO_Control_A8toD8	87.6729	11.952646999999999	5.1037099999999995
P2_DMSO_Control_E12toH12	88.8672	13.573867	5.886381
P2_DMSO_Control_E4toH4	91.17779999999999	8.26313	3.408123
P2_DMSO_Control_E8toH8	91.9735	15.321966	6.667802999999999
P2_MoA1_Pro_HC_A3toD3	92.6039	13.646101	5.933748
P2_MoA1_Pro_HC_A7toD7	87.7363	10.016418	4.252685
P2_MoA1_Pro_HC_E3toH3	92.4468	10.103129	4.485556
P2_MoA1_Pro_HC_E7toH7	88.0724	12.126911999999999	5.337482
P2_TC2_4Mi_HC_A2toD2	90.967	7.08446	3.443784
P2_TC2_4Mi_HC_A6toD6	90.0258	14.111234999999999	6.321867999999999
P2_TC2_4Mi_HC_E2toH2	90.7195	10.729756	4.69333
P2_TC2_4Mi_HC_E6toH6	93.0222	13.623270999999999	5.703472
P2_TC2_4Mi_LC_A1toD1	92.6852	12.925968	5.793800999999999
P2_TC2_4Mi_LC_A5toD5	90.401	9.575059999999999	4.122894
P2_TC2_4Mi_LC_E1toH1	92.7883	8.678474999999999	4.073067
P2_TC2_4Mi_LC_E5toH5	91.2641	9.829302	4.112738
P3_DMSO_Control_A12toD12	93.176	13.341216999999999	6.101863
P3_DMSO_Control_A4toD4	93.3183	11.933596999999999	4.991701
P3_DMSO_Control_E12toH12	94.7373	14.046529	6.244333999999999
P3_MoA2_KCA_LC_A11toD11	93.51660000000001	14.166494	6.128513
P3_MoA2_KCA_LC_A3toD3	92.849	11.595459	5.310313
P3_MoA2_KCA_LC_E11toH11	92.9046	14.512658	6.197222
P3_MoA2_KCA_LC_E3toH3	91.7536	11.144326999999999	4.7785519999999995
P3_TC3_2Mi_HC_A10toD10	93.5315	12.981838	5.643997
P3_TC3_2Mi_HC_A2toD2	95.90769999999999	6.678516	3.087755
P3_TC3_2Mi_HC_E2toH2	94.5942	13.585526	6.253875
P3_TC3_2Mi_LC_A1toD1	96.279	6.563012	3.0720039999999997
P3_TC3_2Mi_LC_A5toD5	93.2179	12.313241	5.342364
P3_TC3_2Mi_LC_E1toH1	94.5033	8.560284	4.095934
P4_DMSO_Control_A4toD4	93.66839999999999	11.220965	5.254144
P4_DMSO_Control_E4toH4	95.077	11.360204	5.441625999999999
P4_DMSO_Control_E8toH8	92.9807	12.463607999999999	5.587231
P4_MoA2_KCA_HC_A3toD3	92.3745	12.581577	6.289333999999999
P4_MoA2_KCA_HC_A7toD7	93.1388	11.54199	5.547376
P4_MoA2_KCA_HC_E3toH3	95.58539999999999	7.371999	3.7143759999999997
P4_MoA2_KCA_HC_E7toH7	94.1468	12.900395	6.4379599999999995
P4_TC4_1Mi_HC_A2toD2	94.8422	9.053918	4.353505999999999
P4_TC4_1Mi_HC_A6toD6	92.7369	13.785824999999999	6.385005
P4_TC4_1Mi_HC_E10toH10	93.59870000000001	11.668849	5.841612
P4_TC4_1Mi_HC_E2toH2	96.5056	4.868646	2.335954
P4_TC4_1Mi_LC_A1toD1	95.6965	7.79285	3.6482539999999997
P4_TC4_1Mi_LC_A5toD5	90.4869	8.751833	4.108188
P4_TC4_1Mi_LC_A9toD9	93.0974	12.270461	5.784542999999999
P4_TC4_1Mi_LC_E1toH1	96.9298	7.75747	3.6411249999999997
P5_DMSO_Control_A12toD12	94.1152	10.529064	4.2144189999999995
P5_DMSO_Control_A4toD4	88.77629999999999	9.361672	4.0061219999999995
P5_DMSO_Control_E12toH12	90.03229999999999	13.117054999999999	5.203465
P5_DMSO_Control_E4toH4	88.6352	11.178189	4.679749
P5_DMSO_Control_E8toH8	86.7977	11.606776	4.9460679999999995
P5_MoA3_Asp_LC_A3toD3	91.4887	8.720519	3.840163
P5_MoA3_Asp_LC_A7toD7	84.3571	9.267750999999999	3.894843
P5_MoA3_Asp_LC_E3toH3	93.1456	7.9606069999999995	3.4394259999999997
P5_TC5_Dmi_HC_A2toD2	91.2416	8.016204	3.686558
P5_TC5_Dmi_HC_A6toD6	89.8529	10.11191	4.3306569999999995
P5_TC5_Dmi_HC_E2toH2	92.1755	8.896315999999999	4.021173
P5_TC5_Dmi_HC_E6toH6	90.5031	14.380474999999999	6.354905
P5_TC5_Dmi_LC_A1toD1	93.3934	9.930731	4.386248
P5_TC5_Dmi_LC_E1toH1	92.3809	7.539529	3.4078359999999996
P5_TC5_Dmi_LC_E5toH5	87.3862	10.448644999999999	4.3155589999999995
P5_TC5_Dmi_LC_E9toH9	89.484	8.71497	3.6779249999999997
P6_DMSO_Control_A12toD12	89.2914	18.899559	7.598636
P6_DMSO_Control_A4toD4	88.7141	8.615105999999999	3.598617
P6_DMSO_Control_A8toD8	82.7009	9.811855	3.9935769999999997
P6_DMSO_Control_E12toH12	90.1886	21.866898	8.832084
P6_DMSO_Control_E4toH4	86.9772	9.826509999999999	3.714874
P6_DMSO_Control_E8toH8	87.0552	10.572636	4.301755
P6_MoA3_Asp_HC_A3toD3	86.8669	8.739512	3.6191609999999996
P6_MoA3_Asp_HC_E3toH3	86.8466	9.384179	3.674193
P6_MoA3_Asp_HC_E7toH7	85.6429	8.672088	3.476031
P6_TC6_2Emi_HC_A2toD2	89.239	8.79689	3.775522
P6_TC6_2Emi_HC_A6toD6	89.75450000000001	8.791921	3.685069
P6_TC6_2Emi_HC_E2toH2	87.993	9.393711999999999	3.7413629999999998
P6_TC6_2Emi_HC_E6toH6	86.7498	9.000878	3.7210199999999998
P6_TC6_2Emi_LC_A1toD1	86.2722	8.515602	3.4732279999999998
P6_TC6_2Emi_LC_A5toD5	87.34150000000001	9.458407	3.899807
P6_TC6_2Emi_LC_E1toH1	87.3385	6.559264	2.540202
P6_TC6_2Emi_LC_E5toH5	85.7273	8.797876	3.6524769999999998
P7_DMSO_Control_A12toD12	93.2081	12.253701999999999	5.5379819999999995
P7_DMSO_Control_A4toD4	96.2661	6.522152999999999	3.103661
P7_DMSO_Control_E12toH12	92.8712	13.994907999999999	6.076721999999999
P7_DMSO_Control_E4toH4	95.7516	6.215503	3.150401
P7_POS_Control_AflaB1_A11toD11	93.2762	13.255847999999999	5.896001
P7_POS_Control_AflaB1_A3toD3	97.15129999999999	7.475445	3.505703
P7_POS_Control_AflaB1_A7toD7	92.39150000000001	12.151297	5.194294
P7_POS_Control_AflaB1_E11toH11	92.97999999999999	11.029174999999999	4.8790759999999995
P7_POS_Control_AflaB1_E3toH3	95.5595	4.85171	2.3734789999999997
P7_POS_Control_AflaB1_E7toH7	91.6816	11.857337	5.038962
P7_TC7_2Ei_HC_A2toD2	95.8142	2.94198	1.405367
P7_TC7_2Ei_HC_A6toD6	92.60249999999999	13.209304999999999	5.534364
P7_TC7_2Ei_HC_E2toH2	96.0137	2.738474	1.314951
P7_TC7_2Ei_HC_E6toH6	93.9526	11.558527	5.12371
P7_TC7_2Ei_LC_A1toD1	97.2103	4.691476	2.036509
P7_TC7_2Ei_LC_A5toD5	95.6018	7.593566999999999	3.449744
P7_TC7_2Ei_LC_A9toD9	92.7859	12.005555	4.878079
P7_TC7_2Ei_LC_E1toH1	95.4269	6.133221	2.667699
P7_TC7_2Ei_LC_E5toH5	94.8751	7.387913999999999	3.4602359999999996
P7_TC7_2Ei_LC_E9toH9	91.6948	11.628682999999999	4.632573
P8_TC8_1Ei_HC_A3toD3	90.2546	10.096224999999999	4.0211049999999995
P8_TC8_1Ei_LC_A2toD2	91.7092	12.286494	5.057475999999999
P9_DMSO_Control_A10toD10	77.1455	2.530697	1.058107
P9_DMSO_Control_A4toD4	56.401999999999994	0.794701	0.33632599999999996
P9_DMSO_Control_A7toD7	52.7933	0.43860899999999997	0.194647
P9_DMSO_Control_E10toH10	84.637	3.746645	1.548239
P9_DMSO_Control_E4toH4	86.8325	6.374270999999999	2.779136
P9_DMSO_Control_E7toH7	86.2782	5.157757	2.256474
P9_TC9_1Vi_HC_A3toD3	54.955	0.385559	0.17487
P9_TC9_1Vi_HC_A6toD6	61.0337	1.507638	0.694278
P9_TC9_1Vi_HC_A9toD9	62.8157	2.266779	0.7916139999999999
P9_TC9_1Vi_HC_E3toH3	78.2479	5.181712999999999	2.132701
P9_TC9_1Vi_HC_E6toH6	84.1944	4.409744	1.870453
P9_TC9_1Vi_HC_E9toH9	87.2874	5.945544	2.622699
P9_TC9_1Vi_LC_A2toD2	83.4505	4.690957	2.133267
P9_TC9_1Vi_LC_A5toD5	57.5123	1.165908	0.540261
P9_TC9_1Vi_LC_A8toD8	50.481500000000004	0.668667	0.235485
P9_TC9_1Vi_LC_E2toH2	79.3881	5.303599	2.258485
P9_TC9_1Vi_LC_E5toH5	85.5337	3.935323	1.572203
P9_TC9_1Vi_LC_E8toH8	84.0938	4.876066	2.176387