Species	degs_category	tool	stat	med_value
CElegans	high	fastp	after_filtering_gc_content	39.80255
CElegans	high	fastp	after_filtering_q30_bases	571.13821
CElegans	high	fastp	after_filtering_q30_rate	87.26105
CElegans	high	fastp	before_filtering_read1_mean_length	141
CElegans	high	fastp	filtering_result_passed_filter_reads	5.797077
CElegans	high	fastp	pct_adapter	38.4473938872943
CElegans	high	fastp	pct_surviving	85.58049015860288
CElegans	high	fastqc_raw	avg_sequence_length	151
CElegans	high	fastqc_raw	median_sequence_length	151
CElegans	high	fastqc_raw	percent_duplicates	34.270883726598115
CElegans	high	fastqc_raw	percent_fails	36.36363636363637
CElegans	high	fastqc_raw	percent_gc	41
CElegans	high	fastqc_raw	total_sequences	6.855011999999999
CElegans	high	fastqc_trimmed	avg_sequence_length	113.23880978254314
CElegans	high	fastqc_trimmed	median_sequence_length	141
CElegans	high	fastqc_trimmed	percent_duplicates	70.80195730252157
CElegans	high	fastqc_trimmed	percent_fails	27.27272727272727
CElegans	high	fastqc_trimmed	percent_gc	39
CElegans	high	fastqc_trimmed	total_sequences	5.797077
CElegans	high	qualimap_rnaseq	5_3_bias	0.41
CElegans	high	qualimap_rnaseq	reads_aligned	1.14269
CElegans	high	qualimap_rnaseq	reads_aligned_exonic	0.7589819999999999
CElegans	high	qualimap_rnaseq	reads_aligned_intergenic	0.14893299999999998
CElegans	high	qualimap_rnaseq	reads_aligned_intronic	0.1437695
CElegans	high	qualimap_rnaseq	reads_aligned_overlapping_exon	0.2505995
CElegans	high	samtools_flagstat	flagstat_total	1.3725269999999998
CElegans	high	samtools_flagstat	mapped_passed	1.3725269999999998
CElegans	high	samtools_flagstat	mapped_passed_pct	100
CElegans	high	samtools_stats	error_rate	0.45092574999999996
CElegans	high	samtools_stats	insert_size_average	0
CElegans	high	samtools_stats	non_primary_alignments	0.23420449999999998
CElegans	high	samtools_stats	raw_total_sequences	1.14269
CElegans	high	samtools_stats	reads_MQ0_percent	1.7109559741091998
CElegans	high	samtools_stats	reads_mapped	1.14269
CElegans	high	samtools_stats	reads_mapped_percent	100
CElegans	high	samtools_stats	reads_properly_paired_percent	0
CElegans	high	sortmerna	rRNA_pct	38.33647063351198
CElegans	high	star	mapped	3.2238499999999997
CElegans	high	star	mapped_percent	93.22999999999999
CElegans	high	star	multimapped	0.269679
CElegans	high	star	total_reads	3.594234
CElegans	high	star	uniquely_mapped	2.9612439999999998
CElegans	high	star	uniquely_mapped_percent	85.77
CElegans	high	umi_tools	dedup_output_reads	1.3725269999999998
CElegans	high	umi_tools	dedup_percent_passing	35.535
CElegans	low	fastp	after_filtering_gc_content	40.31205
CElegans	low	fastp	after_filtering_q30_bases	595.902751
CElegans	low	fastp	after_filtering_q30_rate	87.94335
CElegans	low	fastp	before_filtering_read1_mean_length	141
CElegans	low	fastp	filtering_result_passed_filter_reads	6.178789999999999
CElegans	low	fastp	pct_adapter	38.55303735252656
CElegans	low	fastp	pct_surviving	80.73416933474482
CElegans	low	fastqc_raw	avg_sequence_length	151
CElegans	low	fastqc_raw	median_sequence_length	151
CElegans	low	fastqc_raw	percent_duplicates	63.271713568266414
CElegans	low	fastqc_raw	percent_fails	27.27272727272727
CElegans	low	fastqc_raw	percent_gc	42
CElegans	low	fastqc_raw	total_sequences	7.7605515
CElegans	low	fastqc_trimmed	avg_sequence_length	113.15243462245644
CElegans	low	fastqc_trimmed	median_sequence_length	141
CElegans	low	fastqc_trimmed	percent_duplicates	81.22903555094575
CElegans	low	fastqc_trimmed	percent_fails	27.27272727272727
CElegans	low	fastqc_trimmed	percent_gc	40
CElegans	low	fastqc_trimmed	total_sequences	6.178789999999999
CElegans	low	qualimap_rnaseq	5_3_bias	0.38
CElegans	low	qualimap_rnaseq	reads_aligned	0.6153534999999999
CElegans	low	qualimap_rnaseq	reads_aligned_exonic	0.4004625
CElegans	low	qualimap_rnaseq	reads_aligned_intergenic	0.082857
CElegans	low	qualimap_rnaseq	reads_aligned_intronic	0.071264
CElegans	low	qualimap_rnaseq	reads_aligned_overlapping_exon	0.13247799999999998
CElegans	low	samtools_flagstat	flagstat_total	0.8176125
CElegans	low	samtools_flagstat	mapped_passed	0.8176125
CElegans	low	samtools_flagstat	mapped_passed_pct	100
CElegans	low	samtools_stats	error_rate	0.44193335
CElegans	low	samtools_stats	insert_size_average	0
CElegans	low	samtools_stats	non_primary_alignments	0.19973000000000002
CElegans	low	samtools_stats	raw_total_sequences	0.6153534999999999
CElegans	low	samtools_stats	reads_MQ0_percent	2.7864618639585794
CElegans	low	samtools_stats	reads_mapped	0.6153534999999999
CElegans	low	samtools_stats	reads_mapped_percent	100
CElegans	low	samtools_stats	reads_properly_paired_percent	0
CElegans	low	sortmerna	rRNA_pct	43.502464013402445
CElegans	low	star	mapped	3.011469
CElegans	low	star	mapped_percent	89.905
CElegans	low	star	multimapped	0.286934
CElegans	low	star	total_reads	3.3841685
CElegans	low	star	uniquely_mapped	2.747052
CElegans	low	star	uniquely_mapped_percent	81.11
CElegans	low	umi_tools	dedup_output_reads	0.8176125
CElegans	low	umi_tools	dedup_percent_passing	22.02
CElegans	mid	fastp	after_filtering_gc_content	40.229200000000006
CElegans	mid	fastp	after_filtering_q30_bases	583.245235
CElegans	mid	fastp	after_filtering_q30_rate	87.0013
CElegans	mid	fastp	before_filtering_read1_mean_length	141
CElegans	mid	fastp	filtering_result_passed_filter_reads	5.975609
CElegans	mid	fastp	pct_adapter	41.33043563601433
CElegans	mid	fastp	pct_surviving	79.95364801411404
CElegans	mid	fastqc_raw	avg_sequence_length	151
CElegans	mid	fastqc_raw	median_sequence_length	151
CElegans	mid	fastqc_raw	percent_duplicates	34.745955513399444
CElegans	mid	fastqc_raw	percent_fails	36.36363636363637
CElegans	mid	fastqc_raw	percent_gc	43
CElegans	mid	fastqc_raw	total_sequences	7.536413
CElegans	mid	fastqc_trimmed	avg_sequence_length	112.18996744965949
CElegans	mid	fastqc_trimmed	median_sequence_length	141
CElegans	mid	fastqc_trimmed	percent_duplicates	71.21623903300298
CElegans	mid	fastqc_trimmed	percent_fails	27.27272727272727
CElegans	mid	fastqc_trimmed	percent_gc	40
CElegans	mid	fastqc_trimmed	total_sequences	5.975609
CElegans	mid	qualimap_rnaseq	5_3_bias	0.41
CElegans	mid	qualimap_rnaseq	reads_aligned	1.0370435
CElegans	mid	qualimap_rnaseq	reads_aligned_exonic	0.6735369999999999
CElegans	mid	qualimap_rnaseq	reads_aligned_intergenic	0.1376355
CElegans	mid	qualimap_rnaseq	reads_aligned_intronic	0.13310499999999997
CElegans	mid	qualimap_rnaseq	reads_aligned_overlapping_exon	0.22695700000000002
CElegans	mid	samtools_flagstat	flagstat_total	1.2996775
CElegans	mid	samtools_flagstat	mapped_passed	1.2996775
CElegans	mid	samtools_flagstat	mapped_passed_pct	100
CElegans	mid	samtools_stats	error_rate	0.47512255000000003
CElegans	mid	samtools_stats	insert_size_average	0
CElegans	mid	samtools_stats	non_primary_alignments	0.2423515
CElegans	mid	samtools_stats	raw_total_sequences	1.0370435
CElegans	mid	samtools_stats	reads_MQ0_percent	2.1089814439383234
CElegans	mid	samtools_stats	reads_mapped	1.0370435
CElegans	mid	samtools_stats	reads_mapped_percent	100
CElegans	mid	samtools_stats	reads_properly_paired_percent	0
CElegans	mid	sortmerna	rRNA_pct	40.6701764487496
CElegans	mid	star	mapped	3.0618594999999997
CElegans	mid	star	mapped_percent	90.735
CElegans	mid	star	multimapped	0.2776235
CElegans	mid	star	total_reads	3.479197
CElegans	mid	star	uniquely_mapped	2.7593125
CElegans	mid	star	uniquely_mapped_percent	82.095
CElegans	mid	umi_tools	dedup_output_reads	1.2996775
CElegans	mid	umi_tools	dedup_percent_passing	35.260000000000005
Danio	high	fastp	after_filtering_gc_content	36.620400000000004
Danio	high	fastp	after_filtering_q30_bases	601.1561079999999
Danio	high	fastp	after_filtering_q30_rate	87.40335
Danio	high	fastp	before_filtering_read1_mean_length	141
Danio	high	fastp	filtering_result_passed_filter_reads	6.278069499999999
Danio	high	fastp	pct_adapter	43.39727770939432
Danio	high	fastp	pct_surviving	87.91242018661745
Danio	high	fastqc_raw	avg_sequence_length	151
Danio	high	fastqc_raw	median_sequence_length	151
Danio	high	fastqc_raw	percent_duplicates	44.93142990959626
Danio	high	fastqc_raw	percent_fails	36.36363636363637
Danio	high	fastqc_raw	percent_gc	38
Danio	high	fastqc_raw	total_sequences	7.159748
Danio	high	fastqc_trimmed	avg_sequence_length	108.20885247559022
Danio	high	fastqc_trimmed	median_sequence_length	132
Danio	high	fastqc_trimmed	percent_duplicates	66.51495119349799
Danio	high	fastqc_trimmed	percent_fails	36.36363636363637
Danio	high	fastqc_trimmed	percent_gc	36
Danio	high	fastqc_trimmed	total_sequences	6.278069499999999
Danio	high	qualimap_rnaseq	5_3_bias	0.79
Danio	high	qualimap_rnaseq	reads_aligned	1.5026325
Danio	high	qualimap_rnaseq	reads_aligned_exonic	0.894363
Danio	high	qualimap_rnaseq	reads_aligned_intergenic	0.1133785
Danio	high	qualimap_rnaseq	reads_aligned_intronic	0.374158
Danio	high	qualimap_rnaseq	reads_aligned_overlapping_exon	0.11170949999999999
Danio	high	samtools_flagstat	flagstat_total	1.9679455
Danio	high	samtools_flagstat	mapped_passed	1.9679455
Danio	high	samtools_flagstat	mapped_passed_pct	100
Danio	high	samtools_stats	error_rate	0.9130684499999999
Danio	high	samtools_stats	insert_size_average	0
Danio	high	samtools_stats	non_primary_alignments	0.454302
Danio	high	samtools_stats	raw_total_sequences	1.5026325
Danio	high	samtools_stats	reads_MQ0_percent	2.6263496469126064
Danio	high	samtools_stats	reads_mapped	1.5026325
Danio	high	samtools_stats	reads_mapped_percent	100
Danio	high	samtools_stats	reads_properly_paired_percent	0
Danio	high	sortmerna	rRNA_pct	10.053897784332921
Danio	high	star	mapped	5.4158725
Danio	high	star	mapped_percent	95.74000000000001
Danio	high	star	multimapped	0.3725055
Danio	high	star	total_reads	5.614710499999999
Danio	high	star	uniquely_mapped	5.0030915
Danio	high	star	uniquely_mapped_percent	89.1
Danio	high	umi_tools	dedup_output_reads	1.9679455
Danio	high	umi_tools	dedup_percent_passing	31.09
Danio	low	fastp	after_filtering_gc_content	36.8656
Danio	low	fastp	after_filtering_q30_bases	624.893572
Danio	low	fastp	after_filtering_q30_rate	87.66275
Danio	low	fastp	before_filtering_read1_mean_length	141
Danio	low	fastp	filtering_result_passed_filter_reads	6.325428499999999
Danio	low	fastp	pct_adapter	38.775640082742314
Danio	low	fastp	pct_surviving	88.9745215647842
Danio	low	fastqc_raw	avg_sequence_length	151
Danio	low	fastqc_raw	median_sequence_length	151
Danio	low	fastqc_raw	percent_duplicates	50.46685166506138
Danio	low	fastqc_raw	percent_fails	36.36363636363637
Danio	low	fastqc_raw	percent_gc	38
Danio	low	fastqc_raw	total_sequences	7.138145999999999
Danio	low	fastqc_trimmed	avg_sequence_length	110.96694096430303
Danio	low	fastqc_trimmed	median_sequence_length	137
Danio	low	fastqc_trimmed	percent_duplicates	68.65043082993735
Danio	low	fastqc_trimmed	percent_fails	36.36363636363637
Danio	low	fastqc_trimmed	percent_gc	36
Danio	low	fastqc_trimmed	total_sequences	6.338845
Danio	low	qualimap_rnaseq	5_3_bias	0.79
Danio	low	qualimap_rnaseq	reads_aligned	1.539932
Danio	low	qualimap_rnaseq	reads_aligned_exonic	0.910977
Danio	low	qualimap_rnaseq	reads_aligned_intergenic	0.114468
Danio	low	qualimap_rnaseq	reads_aligned_intronic	0.391033
Danio	low	qualimap_rnaseq	reads_aligned_overlapping_exon	0.114599
Danio	low	samtools_flagstat	flagstat_total	1.984317
Danio	low	samtools_flagstat	mapped_passed	1.984317
Danio	low	samtools_flagstat	mapped_passed_pct	100
Danio	low	samtools_stats	error_rate	0.9213331
Danio	low	samtools_stats	insert_size_average	0
Danio	low	samtools_stats	non_primary_alignments	0.431918
Danio	low	samtools_stats	raw_total_sequences	1.539932
Danio	low	samtools_stats	reads_MQ0_percent	2.7016736988771997
Danio	low	samtools_stats	reads_mapped	1.539932
Danio	low	samtools_stats	reads_mapped_percent	100
Danio	low	samtools_stats	reads_properly_paired_percent	0
Danio	low	sortmerna	rRNA_pct	9.832205642194596
Danio	low	star	mapped	5.5009
Danio	low	star	mapped_percent	95.62
Danio	low	star	multimapped	0.365128
Danio	low	star	total_reads	5.764818
Danio	low	star	uniquely_mapped	5.1633189999999995
Danio	low	star	uniquely_mapped_percent	89.05
Danio	low	umi_tools	dedup_output_reads	1.984317
Danio	low	umi_tools	dedup_percent_passing	28.81
Danio	mid	fastp	after_filtering_gc_content	36.65885
Danio	mid	fastp	after_filtering_q30_bases	569.4236755
Danio	mid	fastp	after_filtering_q30_rate	87.7484
Danio	mid	fastp	before_filtering_read1_mean_length	141
Danio	mid	fastp	filtering_result_passed_filter_reads	5.8212364999999995
Danio	mid	fastp	pct_adapter	40.900073430167254
Danio	mid	fastp	pct_surviving	86.7315002148618
Danio	mid	fastqc_raw	avg_sequence_length	151
Danio	mid	fastqc_raw	median_sequence_length	151
Danio	mid	fastqc_raw	percent_duplicates	47.00177581353773
Danio	mid	fastqc_raw	percent_fails	36.36363636363637
Danio	mid	fastqc_raw	percent_gc	39
Danio	mid	fastqc_raw	total_sequences	6.7444355
Danio	mid	fastqc_trimmed	avg_sequence_length	110.50452197247684
Danio	mid	fastqc_trimmed	median_sequence_length	137
Danio	mid	fastqc_trimmed	percent_duplicates	66.71888807237106
Danio	mid	fastqc_trimmed	percent_fails	36.36363636363637
Danio	mid	fastqc_trimmed	percent_gc	36
Danio	mid	fastqc_trimmed	total_sequences	5.836119500000001
Danio	mid	qualimap_rnaseq	5_3_bias	0.81
Danio	mid	qualimap_rnaseq	reads_aligned	1.3685654999999999
Danio	mid	qualimap_rnaseq	reads_aligned_exonic	0.7748355
Danio	mid	qualimap_rnaseq	reads_aligned_intergenic	0.10561899999999999
Danio	mid	qualimap_rnaseq	reads_aligned_intronic	0.355004
Danio	mid	qualimap_rnaseq	reads_aligned_overlapping_exon	0.095997
Danio	mid	samtools_flagstat	flagstat_total	1.8163725
Danio	mid	samtools_flagstat	mapped_passed	1.8163725
Danio	mid	samtools_flagstat	mapped_passed_pct	100
Danio	mid	samtools_stats	error_rate	0.9177428000000001
Danio	mid	samtools_stats	insert_size_average	0
Danio	mid	samtools_stats	non_primary_alignments	0.4204605
Danio	mid	samtools_stats	raw_total_sequences	1.3685654999999999
Danio	mid	samtools_stats	reads_MQ0_percent	2.773695277897928
Danio	mid	samtools_stats	reads_mapped	1.3685654999999999
Danio	mid	samtools_stats	reads_mapped_percent	100
Danio	mid	samtools_stats	reads_properly_paired_percent	0
Danio	mid	sortmerna	rRNA_pct	10.126245998475035
Danio	mid	star	mapped	4.988129
Danio	mid	star	mapped_percent	95.11
Danio	mid	star	multimapped	0.3252735
Danio	mid	star	total_reads	5.232501
Danio	mid	star	uniquely_mapped	4.6581785
Danio	mid	star	uniquely_mapped_percent	88.83
Danio	mid	umi_tools	dedup_output_reads	1.8163725
Danio	mid	umi_tools	dedup_percent_passing	31.9
Daphnia	high	fastp	after_filtering_gc_content	37.3537
Daphnia	high	fastp	after_filtering_q30_bases	707.5630429999999
Daphnia	high	fastp	after_filtering_q30_rate	88.23685
Daphnia	high	fastp	before_filtering_read1_mean_length	141
Daphnia	high	fastp	filtering_result_passed_filter_reads	7.167673
Daphnia	high	fastp	pct_adapter	41.070472744010864
Daphnia	high	fastp	pct_surviving	91.77922218254133
Daphnia	high	fastqc_raw	avg_sequence_length	151
Daphnia	high	fastqc_raw	median_sequence_length	151
Daphnia	high	fastqc_raw	percent_duplicates	49.86587820094272
Daphnia	high	fastqc_raw	percent_fails	36.36363636363637
Daphnia	high	fastqc_raw	percent_gc	38
Daphnia	high	fastqc_raw	total_sequences	8.0962405
Daphnia	high	fastqc_trimmed	avg_sequence_length	111.14774761633744
Daphnia	high	fastqc_trimmed	median_sequence_length	137
Daphnia	high	fastqc_trimmed	percent_duplicates	71.03748695956898
Daphnia	high	fastqc_trimmed	percent_fails	36.36363636363637
Daphnia	high	fastqc_trimmed	percent_gc	37
Daphnia	high	fastqc_trimmed	total_sequences	7.167673
Daphnia	high	qualimap_rnaseq	5_3_bias	0.23
Daphnia	high	qualimap_rnaseq	reads_aligned	1.552058
Daphnia	high	qualimap_rnaseq	reads_aligned_exonic	0.987324
Daphnia	high	qualimap_rnaseq	reads_aligned_intergenic	0.2349805
Daphnia	high	qualimap_rnaseq	reads_aligned_intronic	0.1745025
Daphnia	high	qualimap_rnaseq	reads_aligned_overlapping_exon	0.22370099999999998
Daphnia	high	samtools_flagstat	flagstat_total	1.9335715
Daphnia	high	samtools_flagstat	mapped_passed	1.9335715
Daphnia	high	samtools_flagstat	mapped_passed_pct	100
Daphnia	high	samtools_stats	error_rate	1.251085
Daphnia	high	samtools_stats	insert_size_average	0
Daphnia	high	samtools_stats	non_primary_alignments	0.372405
Daphnia	high	samtools_stats	raw_total_sequences	1.552058
Daphnia	high	samtools_stats	reads_MQ0_percent	1.5722521085956322
Daphnia	high	samtools_stats	reads_mapped	1.552058
Daphnia	high	samtools_stats	reads_mapped_percent	100
Daphnia	high	samtools_stats	reads_properly_paired_percent	0
Daphnia	high	sortmerna	rRNA_pct	17.049437485550644
Daphnia	high	star	mapped	5.6500685
Daphnia	high	star	mapped_percent	96.1
Daphnia	high	star	multimapped	0.38370150000000003
Daphnia	high	star	total_reads	5.896008
Daphnia	high	star	uniquely_mapped	5.2781104999999995
Daphnia	high	star	uniquely_mapped_percent	89.57
Daphnia	high	umi_tools	dedup_output_reads	1.9335715
Daphnia	high	umi_tools	dedup_percent_passing	30.65
Daphnia	low	fastp	after_filtering_gc_content	37.161249999999995
Daphnia	low	fastp	after_filtering_q30_bases	558.0849444999999
Daphnia	low	fastp	after_filtering_q30_rate	88.02879999999999
Daphnia	low	fastp	before_filtering_read1_mean_length	141
Daphnia	low	fastp	filtering_result_passed_filter_reads	5.9814905
Daphnia	low	fastp	pct_adapter	47.822267742612155
Daphnia	low	fastp	pct_surviving	86.41854004014866
Daphnia	low	fastqc_raw	avg_sequence_length	151
Daphnia	low	fastqc_raw	median_sequence_length	151
Daphnia	low	fastqc_raw	percent_duplicates	38.639781509812906
Daphnia	low	fastqc_raw	percent_fails	36.36363636363637
Daphnia	low	fastqc_raw	percent_gc	39
Daphnia	low	fastqc_raw	total_sequences	7.0413675
Daphnia	low	fastqc_trimmed	avg_sequence_length	106.50433510073621
Daphnia	low	fastqc_trimmed	median_sequence_length	122
Daphnia	low	fastqc_trimmed	percent_duplicates	69.00539462739157
Daphnia	low	fastqc_trimmed	percent_fails	36.36363636363637
Daphnia	low	fastqc_trimmed	percent_gc	37
Daphnia	low	fastqc_trimmed	total_sequences	5.9814905
Daphnia	low	qualimap_rnaseq	5_3_bias	0.23
Daphnia	low	qualimap_rnaseq	reads_aligned	1.380564
Daphnia	low	qualimap_rnaseq	reads_aligned_exonic	0.8782645
Daphnia	low	qualimap_rnaseq	reads_aligned_intergenic	0.20969949999999998
Daphnia	low	qualimap_rnaseq	reads_aligned_intronic	0.153391
Daphnia	low	qualimap_rnaseq	reads_aligned_overlapping_exon	0.194366
Daphnia	low	samtools_flagstat	flagstat_total	1.754236
Daphnia	low	samtools_flagstat	mapped_passed	1.754236
Daphnia	low	samtools_flagstat	mapped_passed_pct	100
Daphnia	low	samtools_stats	error_rate	1.257056
Daphnia	low	samtools_stats	insert_size_average	0
Daphnia	low	samtools_stats	non_primary_alignments	0.3644255
Daphnia	low	samtools_stats	raw_total_sequences	1.380564
Daphnia	low	samtools_stats	reads_MQ0_percent	1.805048563404212
Daphnia	low	samtools_stats	reads_mapped	1.380564
Daphnia	low	samtools_stats	reads_mapped_percent	100
Daphnia	low	samtools_stats	reads_properly_paired_percent	0
Daphnia	low	sortmerna	rRNA_pct	16.72295728447834
Daphnia	low	star	mapped	4.6744725
Daphnia	low	star	mapped_percent	95.14
Daphnia	low	star	multimapped	0.31533849999999997
Daphnia	low	star	total_reads	4.904534
Daphnia	low	star	uniquely_mapped	4.369921
Daphnia	low	star	uniquely_mapped_percent	88.745
Daphnia	low	umi_tools	dedup_output_reads	1.754236
Daphnia	low	umi_tools	dedup_percent_passing	33.21
Daphnia	mid	fastp	after_filtering_gc_content	37.393550000000005
Daphnia	mid	fastp	after_filtering_q30_bases	655.7504485
Daphnia	mid	fastp	after_filtering_q30_rate	89.3609
Daphnia	mid	fastp	before_filtering_read1_mean_length	141
Daphnia	mid	fastp	filtering_result_passed_filter_reads	6.715101499999999
Daphnia	mid	fastp	pct_adapter	40.7035485377391
Daphnia	mid	fastp	pct_surviving	90.58891371439788
Daphnia	mid	fastqc_raw	avg_sequence_length	151
Daphnia	mid	fastqc_raw	median_sequence_length	151
Daphnia	mid	fastqc_raw	percent_duplicates	50.77562882668325
Daphnia	mid	fastqc_raw	percent_fails	36.36363636363637
Daphnia	mid	fastqc_raw	percent_gc	38
Daphnia	mid	fastqc_raw	total_sequences	7.52403
Daphnia	mid	fastqc_trimmed	avg_sequence_length	111.07245097928528
Daphnia	mid	fastqc_trimmed	median_sequence_length	137
Daphnia	mid	fastqc_trimmed	percent_duplicates	71.55847631525279
Daphnia	mid	fastqc_trimmed	percent_fails	36.36363636363637
Daphnia	mid	fastqc_trimmed	percent_gc	37
Daphnia	mid	fastqc_trimmed	total_sequences	6.715101499999999
Daphnia	mid	qualimap_rnaseq	5_3_bias	0.22
Daphnia	mid	qualimap_rnaseq	reads_aligned	1.444055
Daphnia	mid	qualimap_rnaseq	reads_aligned_exonic	0.913163
Daphnia	mid	qualimap_rnaseq	reads_aligned_intergenic	0.2235605
Daphnia	mid	qualimap_rnaseq	reads_aligned_intronic	0.16174099999999997
Daphnia	mid	qualimap_rnaseq	reads_aligned_overlapping_exon	0.2039265
Daphnia	mid	samtools_flagstat	flagstat_total	1.7898425
Daphnia	mid	samtools_flagstat	mapped_passed	1.7898425
Daphnia	mid	samtools_flagstat	mapped_passed_pct	100
Daphnia	mid	samtools_stats	error_rate	1.2457820000000002
Daphnia	mid	samtools_stats	insert_size_average	0
Daphnia	mid	samtools_stats	non_primary_alignments	0.3468425
Daphnia	mid	samtools_stats	raw_total_sequences	1.444055
Daphnia	mid	samtools_stats	reads_MQ0_percent	1.6283044134724751
Daphnia	mid	samtools_stats	reads_mapped	1.444055
Daphnia	mid	samtools_stats	reads_mapped_percent	100
Daphnia	mid	samtools_stats	reads_properly_paired_percent	0
Daphnia	mid	sortmerna	rRNA_pct	17.40389308022901
Daphnia	mid	star	mapped	5.2312765
Daphnia	mid	star	mapped_percent	96.02
Daphnia	mid	star	multimapped	0.33673549999999997
Daphnia	mid	star	total_reads	5.477454
Daphnia	mid	star	uniquely_mapped	4.891537
Daphnia	mid	star	uniquely_mapped_percent	89.63499999999999
Daphnia	mid	umi_tools	dedup_output_reads	1.7898425
Daphnia	mid	umi_tools	dedup_percent_passing	30.58
Drosophila	high	fastp	after_filtering_gc_content	36.7589
Drosophila	high	fastp	after_filtering_q30_bases	626.4257175
Drosophila	high	fastp	after_filtering_q30_rate	86.88465
Drosophila	high	fastp	before_filtering_read1_mean_length	141
Drosophila	high	fastp	filtering_result_passed_filter_reads	6.1752745000000004
Drosophila	high	fastp	pct_adapter	30.50292293571964
Drosophila	high	fastp	pct_surviving	87.63189317398147
Drosophila	high	fastqc_raw	avg_sequence_length	151
Drosophila	high	fastqc_raw	median_sequence_length	151
Drosophila	high	fastqc_raw	percent_duplicates	41.55828321483054
Drosophila	high	fastqc_raw	percent_fails	27.27272727272727
Drosophila	high	fastqc_raw	percent_gc	38
Drosophila	high	fastqc_raw	total_sequences	7.1154735
Drosophila	high	fastqc_trimmed	avg_sequence_length	116.2651409363733
Drosophila	high	fastqc_trimmed	median_sequence_length	141
Drosophila	high	fastqc_trimmed	percent_duplicates	64.54718064806423
Drosophila	high	fastqc_trimmed	percent_fails	18.181818181818183
Drosophila	high	fastqc_trimmed	percent_gc	36
Drosophila	high	fastqc_trimmed	total_sequences	6.1799475
Drosophila	high	qualimap_rnaseq	5_3_bias	0.39
Drosophila	high	qualimap_rnaseq	reads_aligned	1.620864
Drosophila	high	qualimap_rnaseq	reads_aligned_exonic	1.244129
Drosophila	high	qualimap_rnaseq	reads_aligned_intergenic	0.10098950000000001
Drosophila	high	qualimap_rnaseq	reads_aligned_intronic	0.1436315
Drosophila	high	qualimap_rnaseq	reads_aligned_overlapping_exon	0.21885149999999998
Drosophila	high	samtools_flagstat	flagstat_total	2.036015
Drosophila	high	samtools_flagstat	mapped_passed	2.036015
Drosophila	high	samtools_flagstat	mapped_passed_pct	100
Drosophila	high	samtools_stats	error_rate	0.7425038500000001
Drosophila	high	samtools_stats	insert_size_average	0
Drosophila	high	samtools_stats	non_primary_alignments	0.4136375
Drosophila	high	samtools_stats	raw_total_sequences	1.620864
Drosophila	high	samtools_stats	reads_MQ0_percent	2.318266704131193
Drosophila	high	samtools_stats	reads_mapped	1.620864
Drosophila	high	samtools_stats	reads_mapped_percent	100
Drosophila	high	samtools_stats	reads_properly_paired_percent	0
Drosophila	high	sortmerna	rRNA_pct	19.29797584139738
Drosophila	high	star	mapped	4.6566075
Drosophila	high	star	mapped_percent	94.21000000000001
Drosophila	high	star	multimapped	0.27781199999999995
Drosophila	high	star	total_reads	4.94316
Drosophila	high	star	uniquely_mapped	4.370767
Drosophila	high	star	uniquely_mapped_percent	88.25999999999999
Drosophila	high	umi_tools	dedup_output_reads	2.036015
Drosophila	high	umi_tools	dedup_percent_passing	35.245000000000005
Drosophila	low	fastp	after_filtering_gc_content	37.6974
Drosophila	low	fastp	after_filtering_q30_bases	672.309469
Drosophila	low	fastp	after_filtering_q30_rate	87.96945
Drosophila	low	fastp	before_filtering_read1_mean_length	141
Drosophila	low	fastp	filtering_result_passed_filter_reads	6.579240499999999
Drosophila	low	fastp	pct_adapter	30.131294990801422
Drosophila	low	fastp	pct_surviving	88.41768846356209
Drosophila	low	fastqc_raw	avg_sequence_length	151
Drosophila	low	fastqc_raw	median_sequence_length	151
Drosophila	low	fastqc_raw	percent_duplicates	46.63506018179037
Drosophila	low	fastqc_raw	percent_fails	27.27272727272727
Drosophila	low	fastqc_raw	percent_gc	39
Drosophila	low	fastqc_raw	total_sequences	7.628982
Drosophila	low	fastqc_trimmed	avg_sequence_length	116.64771940863477
Drosophila	low	fastqc_trimmed	median_sequence_length	141
Drosophila	low	fastqc_trimmed	percent_duplicates	67.31306160824505
Drosophila	low	fastqc_trimmed	percent_fails	18.181818181818183
Drosophila	low	fastqc_trimmed	percent_gc	37
Drosophila	low	fastqc_trimmed	total_sequences	6.579240499999999
Drosophila	low	qualimap_rnaseq	5_3_bias	0.45
Drosophila	low	qualimap_rnaseq	reads_aligned	1.6343394999999998
Drosophila	low	qualimap_rnaseq	reads_aligned_exonic	1.2608234999999999
Drosophila	low	qualimap_rnaseq	reads_aligned_intergenic	0.10331699999999999
Drosophila	low	qualimap_rnaseq	reads_aligned_intronic	0.1430035
Drosophila	low	qualimap_rnaseq	reads_aligned_overlapping_exon	0.23038199999999998
Drosophila	low	samtools_flagstat	flagstat_total	2.0425345
Drosophila	low	samtools_flagstat	mapped_passed	2.0425345
Drosophila	low	samtools_flagstat	mapped_passed_pct	100
Drosophila	low	samtools_stats	error_rate	0.66961235
Drosophila	low	samtools_stats	insert_size_average	0
Drosophila	low	samtools_stats	non_primary_alignments	0.4251045
Drosophila	low	samtools_stats	raw_total_sequences	1.6343394999999998
Drosophila	low	samtools_stats	reads_MQ0_percent	2.2331321222025533
Drosophila	low	samtools_stats	reads_mapped	1.6343394999999998
Drosophila	low	samtools_stats	reads_mapped_percent	100
Drosophila	low	samtools_stats	reads_properly_paired_percent	0
Drosophila	low	sortmerna	rRNA_pct	19.530560068139273
Drosophila	low	star	mapped	4.83464
Drosophila	low	star	mapped_percent	94.245
Drosophila	low	star	multimapped	0.29127
Drosophila	low	star	total_reads	5.286016
Drosophila	low	star	uniquely_mapped	4.546158999999999
Drosophila	low	star	uniquely_mapped_percent	87.52000000000001
Drosophila	low	umi_tools	dedup_output_reads	2.0425345
Drosophila	low	umi_tools	dedup_percent_passing	33.900000000000006
Drosophila	mid	fastp	after_filtering_gc_content	37.059200000000004
Drosophila	mid	fastp	after_filtering_q30_bases	617.4426159999999
Drosophila	mid	fastp	after_filtering_q30_rate	86.46235
Drosophila	mid	fastp	before_filtering_read1_mean_length	141
Drosophila	mid	fastp	filtering_result_passed_filter_reads	6.178934999999999
Drosophila	mid	fastp	pct_adapter	32.457787456922766
Drosophila	mid	fastp	pct_surviving	86.47056783076434
Drosophila	mid	fastqc_raw	avg_sequence_length	151
Drosophila	mid	fastqc_raw	median_sequence_length	151
Drosophila	mid	fastqc_raw	percent_duplicates	37.14500419341124
Drosophila	mid	fastqc_raw	percent_fails	27.27272727272727
Drosophila	mid	fastqc_raw	percent_gc	39
Drosophila	mid	fastqc_raw	total_sequences	7.2469459999999994
Drosophila	mid	fastqc_trimmed	avg_sequence_length	115.32437860751324
Drosophila	mid	fastqc_trimmed	median_sequence_length	141
Drosophila	mid	fastqc_trimmed	percent_duplicates	65.69079635182143
Drosophila	mid	fastqc_trimmed	percent_fails	18.181818181818183
Drosophila	mid	fastqc_trimmed	percent_gc	37
Drosophila	mid	fastqc_trimmed	total_sequences	6.178934999999999
Drosophila	mid	qualimap_rnaseq	5_3_bias	0.41
Drosophila	mid	qualimap_rnaseq	reads_aligned	1.5590525
Drosophila	mid	qualimap_rnaseq	reads_aligned_exonic	1.1967395
Drosophila	mid	qualimap_rnaseq	reads_aligned_intergenic	0.1019515
Drosophila	mid	qualimap_rnaseq	reads_aligned_intronic	0.133183
Drosophila	mid	qualimap_rnaseq	reads_aligned_overlapping_exon	0.21952100000000002
Drosophila	mid	samtools_flagstat	flagstat_total	1.979882
Drosophila	mid	samtools_flagstat	mapped_passed	1.979882
Drosophila	mid	samtools_flagstat	mapped_passed_pct	100
Drosophila	mid	samtools_stats	error_rate	0.7384688500000001
Drosophila	mid	samtools_stats	insert_size_average	0
Drosophila	mid	samtools_stats	non_primary_alignments	0.419571
Drosophila	mid	samtools_stats	raw_total_sequences	1.5590525
Drosophila	mid	samtools_stats	reads_MQ0_percent	2.4148942506241715
Drosophila	mid	samtools_stats	reads_mapped	1.5590525
Drosophila	mid	samtools_stats	reads_mapped_percent	100
Drosophila	mid	samtools_stats	reads_properly_paired_percent	0
Drosophila	mid	sortmerna	rRNA_pct	21.030359816518448
Drosophila	mid	star	mapped	4.4704555
Drosophila	mid	star	mapped_percent	93.695
Drosophila	mid	star	multimapped	0.287307
Drosophila	mid	star	total_reads	4.828077
Drosophila	mid	star	uniquely_mapped	4.167211999999999
Drosophila	mid	star	uniquely_mapped_percent	87.48
Drosophila	mid	umi_tools	dedup_output_reads	1.979882
Drosophila	mid	umi_tools	dedup_percent_passing	36.195
HepG2	high	fastp	after_filtering_gc_content	40.1734
HepG2	high	fastp	after_filtering_q30_bases	573.349709
HepG2	high	fastp	after_filtering_q30_rate	87.57169999999999
HepG2	high	fastp	before_filtering_read1_mean_length	141
HepG2	high	fastp	filtering_result_passed_filter_reads	5.8350905
HepG2	high	fastp	pct_adapter	38.53111392443094
HepG2	high	fastp	pct_surviving	87.3871098266662
HepG2	high	fastqc_raw	avg_sequence_length	151
HepG2	high	fastqc_raw	median_sequence_length	151
HepG2	high	fastqc_raw	percent_duplicates	49.94125906009225
HepG2	high	fastqc_raw	percent_fails	27.27272727272727
HepG2	high	fastqc_raw	percent_gc	41
HepG2	high	fastqc_raw	total_sequences	6.932201
HepG2	high	fastqc_trimmed	avg_sequence_length	112.04240543209752
HepG2	high	fastqc_trimmed	median_sequence_length	137
HepG2	high	fastqc_trimmed	percent_duplicates	63.153354433515574
HepG2	high	fastqc_trimmed	percent_fails	18.181818181818183
HepG2	high	fastqc_trimmed	percent_gc	40
HepG2	high	fastqc_trimmed	total_sequences	5.8350905
HepG2	high	qualimap_rnaseq	5_3_bias	0.975
HepG2	high	qualimap_rnaseq	reads_aligned	1.8633055
HepG2	high	qualimap_rnaseq	reads_aligned_exonic	0.8152729999999999
HepG2	high	qualimap_rnaseq	reads_aligned_intergenic	0.125832
HepG2	high	qualimap_rnaseq	reads_aligned_intronic	0.6109279999999999
HepG2	high	qualimap_rnaseq	reads_aligned_overlapping_exon	0.13637349999999998
HepG2	high	samtools_flagstat	flagstat_total	2.581565
HepG2	high	samtools_flagstat	mapped_passed	2.581565
HepG2	high	samtools_flagstat	mapped_passed_pct	100
HepG2	high	samtools_stats	error_rate	0.48432965
HepG2	high	samtools_stats	insert_size_average	0
HepG2	high	samtools_stats	non_primary_alignments	0.7462015
HepG2	high	samtools_stats	raw_total_sequences	1.8633055
HepG2	high	samtools_stats	reads_MQ0_percent	3.2025525882973604
HepG2	high	samtools_stats	reads_mapped	1.8633055
HepG2	high	samtools_stats	reads_mapped_percent	100
HepG2	high	samtools_stats	reads_properly_paired_percent	0
HepG2	high	sortmerna	rRNA_pct	11.751049635825655
HepG2	high	star	mapped	4.957926
HepG2	high	star	mapped_percent	96.74000000000001
HepG2	high	star	multimapped	0.7535345
HepG2	high	star	total_reads	5.091523499999999
HepG2	high	star	uniquely_mapped	4.251621999999999
HepG2	high	star	uniquely_mapped_percent	81.495
HepG2	high	umi_tools	dedup_output_reads	2.581565
HepG2	high	umi_tools	dedup_percent_passing	35.665
HepG2	low	fastp	after_filtering_gc_content	40.7016
HepG2	low	fastp	after_filtering_q30_bases	551.8899355
HepG2	low	fastp	after_filtering_q30_rate	87.70530000000001
HepG2	low	fastp	before_filtering_read1_mean_length	141
HepG2	low	fastp	filtering_result_passed_filter_reads	5.5872375
HepG2	low	fastp	pct_adapter	39.48174947727774
HepG2	low	fastp	pct_surviving	89.58406683261981
HepG2	low	fastqc_raw	avg_sequence_length	151
HepG2	low	fastqc_raw	median_sequence_length	151
HepG2	low	fastqc_raw	percent_duplicates	42.302127074177235
HepG2	low	fastqc_raw	percent_fails	27.27272727272727
HepG2	low	fastqc_raw	percent_gc	41
HepG2	low	fastqc_raw	total_sequences	6.290924499999999
HepG2	low	fastqc_trimmed	avg_sequence_length	111.84517426430226
HepG2	low	fastqc_trimmed	median_sequence_length	137
HepG2	low	fastqc_trimmed	percent_duplicates	60.02943029437024
HepG2	low	fastqc_trimmed	percent_fails	18.181818181818183
HepG2	low	fastqc_trimmed	percent_gc	40
HepG2	low	fastqc_trimmed	total_sequences	5.588309
HepG2	low	qualimap_rnaseq	5_3_bias	1.09
HepG2	low	qualimap_rnaseq	reads_aligned	1.771356
HepG2	low	qualimap_rnaseq	reads_aligned_exonic	0.755087
HepG2	low	qualimap_rnaseq	reads_aligned_intergenic	0.127721
HepG2	low	qualimap_rnaseq	reads_aligned_intronic	0.6066929999999999
HepG2	low	qualimap_rnaseq	reads_aligned_overlapping_exon	0.123775
HepG2	low	samtools_flagstat	flagstat_total	2.428467
HepG2	low	samtools_flagstat	mapped_passed	2.428467
HepG2	low	samtools_flagstat	mapped_passed_pct	100
HepG2	low	samtools_stats	error_rate	0.4898857
HepG2	low	samtools_stats	insert_size_average	0
HepG2	low	samtools_stats	non_primary_alignments	0.66094
HepG2	low	samtools_stats	raw_total_sequences	1.771356
HepG2	low	samtools_stats	reads_MQ0_percent	2.935081306931448
HepG2	low	samtools_stats	reads_mapped	1.771356
HepG2	low	samtools_stats	reads_mapped_percent	100
HepG2	low	samtools_stats	reads_properly_paired_percent	0
HepG2	low	sortmerna	rRNA_pct	11.97328588905119
HepG2	low	star	mapped	4.774443
HepG2	low	star	mapped_percent	97.12
HepG2	low	star	multimapped	0.689955
HepG2	low	star	total_reads	4.891604
HepG2	low	star	uniquely_mapped	4.078379
HepG2	low	star	uniquely_mapped_percent	82.67
HepG2	low	umi_tools	dedup_output_reads	2.428467
HepG2	low	umi_tools	dedup_percent_passing	38.71
HepG2	mid	fastp	after_filtering_gc_content	40.52505
HepG2	mid	fastp	after_filtering_q30_bases	611.2691735
HepG2	mid	fastp	after_filtering_q30_rate	88.7486
HepG2	mid	fastp	before_filtering_read1_mean_length	141
HepG2	mid	fastp	filtering_result_passed_filter_reads	6.1228935
HepG2	mid	fastp	pct_adapter	37.119095031091575
HepG2	mid	fastp	pct_surviving	89.45403332308666
HepG2	mid	fastqc_raw	avg_sequence_length	151
HepG2	mid	fastqc_raw	median_sequence_length	151
HepG2	mid	fastqc_raw	percent_duplicates	52.14669690634898
HepG2	mid	fastqc_raw	percent_fails	27.27272727272727
HepG2	mid	fastqc_raw	percent_gc	40
HepG2	mid	fastqc_raw	total_sequences	6.896855499999999
HepG2	mid	fastqc_trimmed	avg_sequence_length	113.14167496457691
HepG2	mid	fastqc_trimmed	median_sequence_length	141
HepG2	mid	fastqc_trimmed	percent_duplicates	64.94166694430456
HepG2	mid	fastqc_trimmed	percent_fails	18.181818181818183
HepG2	mid	fastqc_trimmed	percent_gc	40
HepG2	mid	fastqc_trimmed	total_sequences	6.1228935
HepG2	mid	qualimap_rnaseq	5_3_bias	1.045
HepG2	mid	qualimap_rnaseq	reads_aligned	1.6719545
HepG2	mid	qualimap_rnaseq	reads_aligned_exonic	0.7598864999999999
HepG2	mid	qualimap_rnaseq	reads_aligned_intergenic	0.123655
HepG2	mid	qualimap_rnaseq	reads_aligned_intronic	0.543549
HepG2	mid	qualimap_rnaseq	reads_aligned_overlapping_exon	0.126136
HepG2	mid	samtools_flagstat	flagstat_total	2.3355875
HepG2	mid	samtools_flagstat	mapped_passed	2.3355875
HepG2	mid	samtools_flagstat	mapped_passed_pct	100
HepG2	mid	samtools_stats	error_rate	0.44941339999999996
HepG2	mid	samtools_stats	insert_size_average	0
HepG2	mid	samtools_stats	non_primary_alignments	0.6501585
HepG2	mid	samtools_stats	raw_total_sequences	1.6719545
HepG2	mid	samtools_stats	reads_MQ0_percent	3.0268729451962777
HepG2	mid	samtools_stats	reads_mapped	1.6719545
HepG2	mid	samtools_stats	reads_mapped_percent	100
HepG2	mid	samtools_stats	reads_properly_paired_percent	0
HepG2	mid	sortmerna	rRNA_pct	11.998994362251707
HepG2	mid	star	mapped	5.193863
HepG2	mid	star	mapped_percent	97.12
HepG2	mid	star	multimapped	0.768766
HepG2	mid	star	total_reads	5.3442975
HepG2	mid	star	uniquely_mapped	4.443505999999999
HepG2	mid	star	uniquely_mapped_percent	82.67500000000001
HepG2	mid	umi_tools	dedup_output_reads	2.3355875
HepG2	mid	umi_tools	dedup_percent_passing	34.055
Xenopus	high	fastp	after_filtering_gc_content	38.1193
Xenopus	high	fastp	after_filtering_q30_bases	491.660563
Xenopus	high	fastp	after_filtering_q30_rate	86.9748
Xenopus	high	fastp	before_filtering_read1_mean_length	141
Xenopus	high	fastp	filtering_result_passed_filter_reads	5.3544979999999995
Xenopus	high	fastp	pct_adapter	46.16563148463996
Xenopus	high	fastp	pct_surviving	84.64319451825693
Xenopus	high	fastqc_raw	avg_sequence_length	151
Xenopus	high	fastqc_raw	median_sequence_length	151
Xenopus	high	fastqc_raw	percent_duplicates	25.68861448843903
Xenopus	high	fastqc_raw	percent_fails	27.27272727272727
Xenopus	high	fastqc_raw	percent_gc	41
Xenopus	high	fastqc_raw	total_sequences	6.760606999999999
Xenopus	high	fastqc_trimmed	avg_sequence_length	107.8467312292486
Xenopus	high	fastqc_trimmed	median_sequence_length	132
Xenopus	high	fastqc_trimmed	percent_duplicates	57.76865414771882
Xenopus	high	fastqc_trimmed	percent_fails	18.181818181818183
Xenopus	high	fastqc_trimmed	percent_gc	38
Xenopus	high	fastqc_trimmed	total_sequences	5.3544979999999995
Xenopus	high	qualimap_rnaseq	5_3_bias	0.275
Xenopus	high	qualimap_rnaseq	reads_aligned	1.661551
Xenopus	high	qualimap_rnaseq	reads_aligned_exonic	0.731116
Xenopus	high	qualimap_rnaseq	reads_aligned_intergenic	0.305625
Xenopus	high	qualimap_rnaseq	reads_aligned_intronic	0.413251
Xenopus	high	qualimap_rnaseq	reads_aligned_overlapping_exon	0.168513
Xenopus	high	samtools_flagstat	flagstat_total	2.326529
Xenopus	high	samtools_flagstat	mapped_passed	2.326529
Xenopus	high	samtools_flagstat	mapped_passed_pct	100
Xenopus	high	samtools_stats	error_rate	1.0512830000000002
Xenopus	high	samtools_stats	insert_size_average	0
Xenopus	high	samtools_stats	non_primary_alignments	0.636249
Xenopus	high	samtools_stats	raw_total_sequences	1.661551
Xenopus	high	samtools_stats	reads_MQ0_percent	3.250054525034089
Xenopus	high	samtools_stats	reads_mapped	1.661551
Xenopus	high	samtools_stats	reads_mapped_percent	100
Xenopus	high	samtools_stats	reads_properly_paired_percent	0
Xenopus	high	sortmerna	rRNA_pct	15.425754655646047
Xenopus	high	star	mapped	4.03787
Xenopus	high	star	mapped_percent	91.54
Xenopus	high	star	multimapped	0.416207
Xenopus	high	star	total_reads	4.452074
Xenopus	high	star	uniquely_mapped	3.668287
Xenopus	high	star	uniquely_mapped_percent	82.57
Xenopus	high	umi_tools	dedup_output_reads	2.326529
Xenopus	high	umi_tools	dedup_percent_passing	42.54
Xenopus	low	fastp	after_filtering_gc_content	37.84010000000001
Xenopus	low	fastp	after_filtering_q30_bases	692.6267415
Xenopus	low	fastp	after_filtering_q30_rate	88.90684999999999
Xenopus	low	fastp	before_filtering_read1_mean_length	141
Xenopus	low	fastp	filtering_result_passed_filter_reads	6.656039
Xenopus	low	fastp	pct_adapter	33.671446138665445
Xenopus	low	fastp	pct_surviving	90.64294046787506
Xenopus	low	fastqc_raw	avg_sequence_length	151
Xenopus	low	fastqc_raw	median_sequence_length	151
Xenopus	low	fastqc_raw	percent_duplicates	55.812009952464024
Xenopus	low	fastqc_raw	percent_fails	27.27272727272727
Xenopus	low	fastqc_raw	percent_gc	39
Xenopus	low	fastqc_raw	total_sequences	7.7100585
Xenopus	low	fastqc_trimmed	avg_sequence_length	114.87326450477838
Xenopus	low	fastqc_trimmed	median_sequence_length	141
Xenopus	low	fastqc_trimmed	percent_duplicates	66.02776827489356
Xenopus	low	fastqc_trimmed	percent_fails	18.181818181818183
Xenopus	low	fastqc_trimmed	percent_gc	37
Xenopus	low	fastqc_trimmed	total_sequences	6.656039
Xenopus	low	qualimap_rnaseq	5_3_bias	0.32
Xenopus	low	qualimap_rnaseq	reads_aligned	1.7625735
Xenopus	low	qualimap_rnaseq	reads_aligned_exonic	0.8564354999999999
Xenopus	low	qualimap_rnaseq	reads_aligned_intergenic	0.3289815
Xenopus	low	qualimap_rnaseq	reads_aligned_intronic	0.42006299999999996
Xenopus	low	qualimap_rnaseq	reads_aligned_overlapping_exon	0.193768
Xenopus	low	samtools_flagstat	flagstat_total	2.3002645
Xenopus	low	samtools_flagstat	mapped_passed	2.3002645
Xenopus	low	samtools_flagstat	mapped_passed_pct	100
Xenopus	low	samtools_stats	error_rate	1.0296245
Xenopus	low	samtools_stats	insert_size_average	0
Xenopus	low	samtools_stats	non_primary_alignments	0.5380595
Xenopus	low	samtools_stats	raw_total_sequences	1.7625735
Xenopus	low	samtools_stats	reads_MQ0_percent	2.433374036510238
Xenopus	low	samtools_stats	reads_mapped	1.7625735
Xenopus	low	samtools_stats	reads_mapped_percent	100
Xenopus	low	samtools_stats	reads_properly_paired_percent	0
Xenopus	low	sortmerna	rRNA_pct	13.785039548579833
Xenopus	low	star	mapped	5.6462795
Xenopus	low	star	mapped_percent	94.105
Xenopus	low	star	multimapped	0.4131785
Xenopus	low	star	total_reads	5.959179499999999
Xenopus	low	star	uniquely_mapped	5.238467999999999
Xenopus	low	star	uniquely_mapped_percent	87.095
Xenopus	low	umi_tools	dedup_output_reads	2.3002645
Xenopus	low	umi_tools	dedup_percent_passing	34.515
Xenopus	mid	fastp	after_filtering_gc_content	37.8883
Xenopus	mid	fastp	after_filtering_q30_bases	580.6733039999999
Xenopus	mid	fastp	after_filtering_q30_rate	87.5476
Xenopus	mid	fastp	before_filtering_read1_mean_length	141
Xenopus	mid	fastp	filtering_result_passed_filter_reads	5.810713499999999
Xenopus	mid	fastp	pct_adapter	41.42422601464144
Xenopus	mid	fastp	pct_surviving	85.64559184972072
Xenopus	mid	fastqc_raw	avg_sequence_length	151
Xenopus	mid	fastqc_raw	median_sequence_length	151
Xenopus	mid	fastqc_raw	percent_duplicates	48.686814645948616
Xenopus	mid	fastqc_raw	percent_fails	27.27272727272727
Xenopus	mid	fastqc_raw	percent_gc	40
Xenopus	mid	fastqc_raw	total_sequences	6.989528
Xenopus	mid	fastqc_trimmed	avg_sequence_length	111.18334320181421
Xenopus	mid	fastqc_trimmed	median_sequence_length	137
Xenopus	mid	fastqc_trimmed	percent_duplicates	64.91670859429313
Xenopus	mid	fastqc_trimmed	percent_fails	18.181818181818183
Xenopus	mid	fastqc_trimmed	percent_gc	37
Xenopus	mid	fastqc_trimmed	total_sequences	5.810713499999999
Xenopus	mid	qualimap_rnaseq	5_3_bias	0.29
Xenopus	mid	qualimap_rnaseq	reads_aligned	1.629097
Xenopus	mid	qualimap_rnaseq	reads_aligned_exonic	0.7713455
Xenopus	mid	qualimap_rnaseq	reads_aligned_intergenic	0.30267049999999995
Xenopus	mid	qualimap_rnaseq	reads_aligned_intronic	0.3857995
Xenopus	mid	qualimap_rnaseq	reads_aligned_overlapping_exon	0.17759149999999999
Xenopus	mid	samtools_flagstat	flagstat_total	2.1832855
Xenopus	mid	samtools_flagstat	mapped_passed	2.1832855
Xenopus	mid	samtools_flagstat	mapped_passed_pct	100
Xenopus	mid	samtools_stats	error_rate	1.039646
Xenopus	mid	samtools_stats	insert_size_average	0
Xenopus	mid	samtools_stats	non_primary_alignments	0.5522555
Xenopus	mid	samtools_stats	raw_total_sequences	1.629097
Xenopus	mid	samtools_stats	reads_MQ0_percent	2.6908002363773695
Xenopus	mid	samtools_stats	reads_mapped	1.629097
Xenopus	mid	samtools_stats	reads_mapped_percent	100
Xenopus	mid	samtools_stats	reads_properly_paired_percent	0
Xenopus	mid	sortmerna	rRNA_pct	13.75519417137637
Xenopus	mid	star	mapped	4.7054694999999995
Xenopus	mid	star	mapped_percent	92.935
Xenopus	mid	star	multimapped	0.390212
Xenopus	mid	star	total_reads	5.0123014999999995
Xenopus	mid	star	uniquely_mapped	4.2920295
Xenopus	mid	star	uniquely_mapped_percent	84.965
Xenopus	mid	umi_tools	dedup_output_reads	2.1832855
Xenopus	mid	umi_tools	dedup_percent_passing	35.53