track autoScale=on name=Promyelocytes_SRR922198 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR922198.Unique.raw.bw track autoScale=on name=Myelocytes_SRR922199 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR922199.Unique.raw.bw track autoScale=on name=Granulocytes_SRR922200 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR922200.Unique.raw.bw track autoScale=on name=Promyelocytes_Multiple_SRR922198 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR922198.UniqueMultiple.raw.bw track autoScale=on name=Myelocytes_Multiple_SRR922199 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR922199.UniqueMultiple.raw.bw track autoScale=on name=Granulocytes_Multiple_SRR922200 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR922200.UniqueMultiple.raw.bw track autoScale=on name=Promyelocytes_norm_Multiple_SRR922198 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/out/norm/SRR922198.UniqueMultiple.raw.norm.bw track autoScale=on name=Myelocytes_norm_Multiple_SRR922199 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/out/norm/SRR922199.UniqueMultiple.raw.norm.bw track autoScale=on name=Granulocytes_norm_Multiple_SRR922200 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/out/norm/SRR922200.UniqueMultiple.raw.norm.bw track autoScale=on name=Pro_Bcell_minus_SRR2157268 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157268.UniqueMultiple.minusRaw.bw track autoScale=on name=Pro_Bcell_plus_SRR2157268 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157268.UniqueMultiple.plusRaw.bw track autoScale=on name=Pre_Bcell_minus_SRR2157273 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157273.UniqueMultiple.minusRaw.bw track autoScale=on name=Pre_Bcell_plus_SRR2157273 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157273.UniqueMultiple.plusRaw.bw track autoScale=on name=immature_Bcell_minus_SRR2157278 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157278.UniqueMultiple.minusRaw.bw track autoScale=on name=immature_Bcell_plus_SRR2157278 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157278.UniqueMultiple.plusRaw.bw track autoScale=on name=mature_Bcell_minus_SRR2157283 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157283.UniqueMultiple.minusRaw.bw track autoScale=on name=mature_Bcell_plus_SRR2157283 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157283.UniqueMultiple.plusRaw.bw track autoScale=on name=folicular_Bcell_minus_SRR2157288 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157288.UniqueMultiple.minusRaw.bw track autoScale=on name=folicular_Bcell_plus_SRR2157288 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157288.UniqueMultiple.plusRaw.bw track autoScale=on name=marginal_Bcell_minus_SRR2157293 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157293.UniqueMultiple.minusRaw.bw track autoScale=on name=marginal_Bcell_plus_SRR2157293 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157293.UniqueMultiple.plusRaw.bw track autoScale=on name=germinal_Bcell_minus_SRR2157298 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157298.UniqueMultiple.minusRaw.bw track autoScale=on name=germinal_Bcell_plus_SRR2157298 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157298.UniqueMultiple.plusRaw.bw track autoScale=on name=b1a_Bcell_minus_SRR2157303 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157303.UniqueMultiple.minusRaw.bw track autoScale=on name=b1a_Bcell_plus_SRR2157303 color=0,0,0 alwaysZero=on maxHeightPixels=35 type=bigWig visibility=2 bigDataUrl=http://public-docs.crg.es/rguigo/Data/sullrich/Blueprint/BigWig/mouse_neutrophil/SRR2157303.UniqueMultiple.plusRaw.bw cp /nfs/users2/rg/sullrich/mapping_mouse/work/*/*/*.UniqueMultiple.raw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil bigWigToBedGraph /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil/SRR922198.UniqueMultiple.raw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil/SRR922198.UniqueMultiple.raw.bedgraph bigWigToBedGraph /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil/SRR922199.UniqueMultiple.raw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil/SRR922199.UniqueMultiple.raw.bedgraph bigWigToBedGraph /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil/SRR922200.UniqueMultiple.raw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil/SRR922200.UniqueMultiple.raw.bedgraph awk '{print "chr"$0}' SRR922198.UniqueMultiple.raw.bedgraph | grep -v 'chrERCC_vector' | sed 's/chrMT/chrM/g' > SRR922198.UniqueMultiple.raw.bed awk '{print "chr"$0}' SRR922199.UniqueMultiple.raw.bedgraph | grep -v 'chrERCC_vector' | sed 's/chrMT/chrM/g' > SRR922199.UniqueMultiple.raw.bed awk '{print "chr"$0}' SRR922200.UniqueMultiple.raw.bedgraph | grep -v 'chrERCC_vector' | sed 's/chrMT/chrM/g' > SRR922200.UniqueMultiple.raw.bed bedGraphToBigWig SRR922198.UniqueMultiple.raw.bed /nfs/users2/rg/projects/references/Genome/M.musculus/mm10/mm10.regChr.chrom.sizes SRR922198.UniqueMultiple.raw.bw bedGraphToBigWig SRR922199.UniqueMultiple.raw.bed /nfs/users2/rg/projects/references/Genome/M.musculus/mm10/mm10.regChr.chrom.sizes SRR922199.UniqueMultiple.raw.bw bedGraphToBigWig SRR922200.UniqueMultiple.raw.bed /nfs/users2/rg/projects/references/Genome/M.musculus/mm10/mm10.regChr.chrom.sizes SRR922200.UniqueMultiple.raw.bw cp /nfs/users2/rg/sullrich/mapping_mouse/work/*/*/*.raw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil cp /nfs/users2/rg/sullrich/mapping_mouse/work/*/*/*.UniqueMultiple.plusRaw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil cp /nfs/users2/rg/sullrich/mapping_mouse/work/*/*/*.UniqueMultiple.minusRaw.bw /nfs/users2/rg/sullrich/public_html/Blueprint/BigWig/mouse_neutrophil