Loading report..

Highlight Samples

Regex mode off

    Rename Samples

    Click here for bulk input.

    Paste two columns of a tab-delimited table here (eg. from Excel).

    First column should be the old name, second column the new name.

    Regex mode off

      Show / Hide Samples

      Regex mode off

        Export Plots

        px
        px
        X

        Download the raw data used to create the plots in this report below:

        Note that additional data was saved in multiqc_data when this report was generated.

        Choose Plots

        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        Save Settings

        You can save the toolbox settings for this report to the browser.

        Load Settings

        Choose a saved report profile from the dropdown box below:

        About MultiQC

        This report was generated using MultiQC, version 1.9

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2022-10-13, 15:15 based on data in: /nfs/users/project/precisiontox_008279/prepilot_full_length_mgi_15_09_2022/log_final_out_grape

        General Statistics

        Showing 15/15 rows and 2/2 columns.
        Sample Name% AlignedM Aligned
        C6-UoB
        48.3%
        12.8
        C7-UoB
        39.6%
        8.3
        C8-UoB
        33.1%
        8.2
        D6-UoB
        64.3%
        12.4
        D7-UoB
        58.1%
        16.6
        D8-UoB
        60.6%
        12.8
        DF4-UoB
        58.9%
        27.3
        DF5-UoB
        58.2%
        31.3
        DF6-UoB
        57.2%
        27.0
        DM4-UoB
        52.5%
        32.7
        DM5-UoB
        51.9%
        21.3
        DM6-UoB
        51.0%
        28.1
        X7-UoB
        82.8%
        15.9
        X8-UoB
        84.9%
        18.1
        X9-UoB
        80.8%
        20.0

        STAR

        STAR is an ultrafast universal RNA-seq aligner.

        Alignment Scores

        loading..

        MultiQC v1.9 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.