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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.9

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2023-03-23, 13:35 based on data in: /nfs/users/project/precisiontox_008279/03_20_2023_mgi_globus_data_analysis/cross-contamination-test/multiqc

        General Statistics

        Showing 64/64 rows and 2/2 columns.
        Sample Name% AlignedM Aligned
        Danio_vs_Daphnia_A04
        0.1%
        0.0
        Danio_vs_Daphnia_B04
        0.1%
        0.0
        Danio_vs_Daphnia_C04
        0.1%
        0.0
        Danio_vs_Daphnia_D04
        0.1%
        0.0
        Danio_vs_Daphnia_E04
        0.1%
        0.0
        Danio_vs_Daphnia_F04
        0.1%
        0.0
        Danio_vs_Daphnia_G04
        0.1%
        0.0
        Danio_vs_Daphnia_H04
        0.1%
        0.0
        Danio_vs_Daphnia_I04
        0.1%
        0.0
        Danio_vs_Daphnia_J04
        0.1%
        0.0
        Danio_vs_Daphnia_K04
        0.1%
        0.0
        Danio_vs_Daphnia_L04
        0.1%
        0.0
        Danio_vs_Daphnia_M04
        0.1%
        0.0
        Danio_vs_Daphnia_N04
        0.1%
        0.0
        Danio_vs_Daphnia_O04
        0.1%
        0.0
        Danio_vs_Daphnia_P04
        0.1%
        0.0
        Drosophila_vs_Daphnia_A04
        0.0%
        0.0
        Drosophila_vs_Daphnia_B04
        0.0%
        0.0
        Drosophila_vs_Daphnia_C04
        0.0%
        0.0
        Drosophila_vs_Daphnia_D04
        0.0%
        0.0
        Drosophila_vs_Daphnia_E04
        0.0%
        0.0
        Drosophila_vs_Daphnia_F04
        0.0%
        0.0
        Drosophila_vs_Daphnia_G04
        0.0%
        0.0
        Drosophila_vs_Daphnia_H04
        0.0%
        0.0
        Drosophila_vs_Daphnia_I04
        0.0%
        0.0
        Drosophila_vs_Daphnia_J04
        0.0%
        0.0
        Drosophila_vs_Daphnia_K04
        0.0%
        0.0
        Drosophila_vs_Daphnia_L04
        0.0%
        0.0
        Drosophila_vs_Daphnia_M04
        0.0%
        0.0
        Drosophila_vs_Daphnia_N04
        0.0%
        0.0
        Drosophila_vs_Daphnia_O04
        0.0%
        0.0
        Drosophila_vs_Daphnia_P04
        0.0%
        0.0
        Human_vs_Daphnia_A04
        0.1%
        0.0
        Human_vs_Daphnia_B04
        0.1%
        0.0
        Human_vs_Daphnia_C04
        0.1%
        0.0
        Human_vs_Daphnia_D04
        0.1%
        0.0
        Human_vs_Daphnia_E04
        0.1%
        0.0
        Human_vs_Daphnia_F04
        0.1%
        0.0
        Human_vs_Daphnia_G04
        0.1%
        0.0
        Human_vs_Daphnia_H04
        0.1%
        0.0
        Human_vs_Daphnia_I04
        0.2%
        0.0
        Human_vs_Daphnia_J04
        0.1%
        0.0
        Human_vs_Daphnia_K04
        0.1%
        0.0
        Human_vs_Daphnia_L04
        0.1%
        0.0
        Human_vs_Daphnia_M04
        0.1%
        0.0
        Human_vs_Daphnia_N04
        0.1%
        0.0
        Human_vs_Daphnia_O04
        0.1%
        0.0
        Human_vs_Daphnia_P04
        0.1%
        0.0
        Xenopus_vs_Daphnia_A04
        72.7%
        2.2
        Xenopus_vs_Daphnia_B04
        72.9%
        2.2
        Xenopus_vs_Daphnia_C04
        73.2%
        2.2
        Xenopus_vs_Daphnia_D04
        72.6%
        3.0
        Xenopus_vs_Daphnia_E04
        72.5%
        2.7
        Xenopus_vs_Daphnia_F04
        73.8%
        1.3
        Xenopus_vs_Daphnia_G04
        72.5%
        3.5
        Xenopus_vs_Daphnia_H04
        73.8%
        4.0
        Xenopus_vs_Daphnia_I04
        72.7%
        3.0
        Xenopus_vs_Daphnia_J04
        74.3%
        1.6
        Xenopus_vs_Daphnia_K04
        72.5%
        1.6
        Xenopus_vs_Daphnia_L04
        74.2%
        3.4
        Xenopus_vs_Daphnia_M04
        71.8%
        4.1
        Xenopus_vs_Daphnia_N04
        74.2%
        1.5
        Xenopus_vs_Daphnia_O04
        72.5%
        2.4
        Xenopus_vs_Daphnia_P04
        73.4%
        4.3

        STAR

        STAR is an ultrafast universal RNA-seq aligner.

        Alignment Scores

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        MultiQC v1.9 - Written by Phil Ewels, available on GitHub.

        This report uses HighCharts, jQuery, jQuery UI, Bootstrap, FileSaver.js and clipboard.js.