DF2-MGI-1_parsed.fq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	DF2-MGI-1_parsed.fq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5256442
Sequences flagged as poor quality	0
Sequence length	100
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGACATGGCTACGATGGGGTTAGTTTTTATTTATTAATTTTTATTATTTT	50133	0.9537439964143046	No Hit
CGACATGGCTACGATGGGGGCGGTCGAGTGCCTCACAGTGTATCAAGGGT	24197	0.46033039078524973	No Hit
CGACATGGCTACGATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20023	0.38092306544997545	No Hit
CGACATGGCTACGATGTGAACCACAGGAAGCGCAAGTCCGGCACTGTCGG	14184	0.2698403216472283	No Hit
CGATGGGGTTAGTTTTTATTTATTAATTTTTATTATTTTTTAAAAAATTA	10452	0.19884172601923505	No Hit
CGACATGGCTACGATGGGGACGATGAGGACGAAGAGGAGTATGACGAGAA	8908	0.1694682448698188	No Hit
CGACATGGCTACGATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	7344	0.13971427821328572	No Hit
CGACATGGCTACGATGGGGAGTTCTGGATCAAGCAGAGTAAAACTATCCA	6256	0.11901586662613228	No Hit
CGACATGGCTACGATGGGAGTTCTGGATCAAGCAGAGTAAAACTATCCAA	5603	0.10659301481876905	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACATG	159760	90.7433	1
ACATGGC	160545	90.62456	3
CATGGCT	161040	90.617424	4
GACATGG	161670	89.99103	2
ATGGCTA	164565	88.61071	5
TGGCTAC	167980	86.83164	6
GCTACGA	166095	86.53806	8
GGCTACG	168430	86.44618	7
CTACGAT	164010	85.781235	9
ACGATGG	152990	42.990913	10-11
TACGATG	156875	42.98983	10-11
GATGGGA	44130	39.454227	12-13
GATGGGG	99030	39.40634	12-13
CGATGGG	164660	39.276085	12-13
ATGGGGG	19125	38.816475	14-15
ATGGGGA	44045	38.714043	14-15
CTACGAA	2795	38.33989	9
TGGGGAA	15225	37.80066	14-15
ATGGGGT	26990	36.77807	14-15
ATGGGGC	12170	36.727196	14-15