#################################################################################################
#################################################################################################
################## RNASeq #######################################################################
#################################################################################################
#################################################################################################


track RNASeq
dragAndDrop subTracks
compositeTrack on
shortLabel RNASeq
longLabel RNASeq
type bigWig
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
_L3_control=_L3_control \
11h_of_cell_death=11h_of_cell_death \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
_L3_control=_L3_control \
control=control \
regeneration=regeneration;
subGroup3 replicate replicate \
1=1 \
2=2;
subGroup4 labExpId labExpId \
H16H15C2=H16H15C2 \
H16H15S2=H16H15S2 \
H16H15C1=H16H15C1 \
H16H25S2=H16H25S2 \
H16H25C2=H16H25C2 \
H16H00C2=H16H00C2 \
H00096C2=H00096C2 \
H16H25S1=H16H25S1 \
H11H00S2=H11H00S2 \
H11H00C2=H11H00C2 \
H16H25C1=H16H25C1 \
H16H00S2=H16H00S2 \
H16H00S1=H16H00S1 \
H16H15S1=H16H15S1 \
H00096C1=H00096C1 \
H11H00C1=H11H00C1 \
H11H00S1=H11H00S1 \
H16H00C1=H16H00C1;
subGroup5 view view \
MultipleRawSignal=MultipleRawSignal;
sortOrder time=+ sampleType=+ replicate=+ labExpId=+ view=+
dimensions dimX=time dimY=sampleType

track H16H15C1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H15C1.UniqueMultiple.raw.bw
shortLabel "15h,control,H16H15C1,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=15h sampleType=control replicate=1 labExpId=H16H15C1 view=MultipleRawSignal

track H16H15S2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H15S2.UniqueMultiple.raw.bw
shortLabel "15h,regeneration,H16H15S2,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=15h sampleType=regeneration replicate=2 labExpId=H16H15S2 view=MultipleRawSignal

track H16H00C2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H00C2.UniqueMultiple.raw.bw
shortLabel "0h,control,H16H00C2,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=0h sampleType=control replicate=2 labExpId=H16H00C2 view=MultipleRawSignal

track H11H00S2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H11H00S2.UniqueMultiple.raw.bw
shortLabel "11h_of_cell_death,regeneration,H11H00S2,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=11h_of_cell_death sampleType=regeneration replicate=2 labExpId=H11H00S2 view=MultipleRawSignal

track H16H00C1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H00C1.UniqueMultiple.raw.bw
shortLabel "0h,control,H16H00C1,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=0h sampleType=control replicate=1 labExpId=H16H00C1 view=MultipleRawSignal

track H16H15S1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H15S1.UniqueMultiple.raw.bw
shortLabel "15h,regeneration,H16H15S1,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=15h sampleType=regeneration replicate=1 labExpId=H16H15S1 view=MultipleRawSignal

track H11H00C1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H11H00C1.UniqueMultiple.raw.bw
shortLabel "11h_of_cell_death,control,H11H00C1,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=11h_of_cell_death sampleType=control replicate=1 labExpId=H11H00C1 view=MultipleRawSignal

track H16H00S1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H00S1.UniqueMultiple.raw.bw
shortLabel "0h,regeneration,H16H00S1,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=0h sampleType=regeneration replicate=1 labExpId=H16H00S1 view=MultipleRawSignal

track H16H25C2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H25C2.UniqueMultiple.raw.bw
shortLabel "25h,control,H16H25C2,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=25h sampleType=control replicate=2 labExpId=H16H25C2 view=MultipleRawSignal

track H16H25S2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H25S2.UniqueMultiple.raw.bw
shortLabel "25h,regeneration,H16H25S2,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=25h sampleType=regeneration replicate=2 labExpId=H16H25S2 view=MultipleRawSignal

track H16H00S2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H00S2.UniqueMultiple.raw.bw
shortLabel "0h,regeneration,H16H00S2,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=0h sampleType=regeneration replicate=2 labExpId=H16H00S2 view=MultipleRawSignal

track H00096C1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H00096C1.UniqueMultiple.raw.bw
shortLabel "_L3_control,_L3_control,H00096C1,MultipleRawSignal"
parent RNASeq
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control replicate=1 labExpId=H00096C1 view=MultipleRawSignal

track H11H00S1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H11H00S1.UniqueMultiple.raw.bw
shortLabel "11h_of_cell_death,regeneration,H11H00S1,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=11h_of_cell_death sampleType=regeneration replicate=1 labExpId=H11H00S1 view=MultipleRawSignal

track H16H25S1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H25S1.UniqueMultiple.raw.bw
shortLabel "25h,regeneration,H16H25S1,MultipleRawSignal"
parent RNASeq
color 255,138,31
type bigWig
subGroups time=25h sampleType=regeneration replicate=1 labExpId=H16H25S1 view=MultipleRawSignal

track H16H25C1.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H25C1.UniqueMultiple.raw.bw
shortLabel "25h,control,H16H25C1,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=25h sampleType=control replicate=1 labExpId=H16H25C1 view=MultipleRawSignal

track H11H00C2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H11H00C2.UniqueMultiple.raw.bw
shortLabel "11h_of_cell_death,control,H11H00C2,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=11h_of_cell_death sampleType=control replicate=2 labExpId=H11H00C2 view=MultipleRawSignal

track H00096C2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H00096C2.UniqueMultiple.raw.bw
shortLabel "_L3_control,_L3_control,H00096C2,MultipleRawSignal"
parent RNASeq
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control replicate=2 labExpId=H00096C2 view=MultipleRawSignal

track H16H15C2.UniqueMultiple.raw.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H15C2.UniqueMultiple.raw.bw
shortLabel "15h,control,H16H15C2,MultipleRawSignal"
parent RNASeq
color 0,178,31
type bigWig
subGroups time=15h sampleType=control replicate=2 labExpId=H16H15C2 view=MultipleRawSignal



#################################################################################################
#################################################################################################
################## ATACSeq ######################################################################
#################################################################################################
#################################################################################################

# super track ATACSeq
track ATACSeq
dragAndDrop subTracks
allButtonPair on
superTrack on
shortLabel ATACSeq
longLabel ATACSeq
type bigWig
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0


# Overlay ATAC
# 
# 
# 
# track 0h
# shortLabel NF:0h
# longLabel 0h
# parent ATACSeq
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# 
# 
# track 11h
# shortLabel NF:11h
# longLabel 11h
# parent ATACSeq
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track 15h
# shortLabel NF:15h
# longLabel 15h
# parent ATACSeq
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track 25h
# shortLabel NF:25h
# longLabel 25h
# parent ATACSeq
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track _L3_control
# shortLabel NF:L3_control
# longLabel _L3_control
# parent ATACSeq
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track AH00096C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel _L3_control,_L3_control,AH00096C1
# parent _L3_control
# color 0,51,0
# type bigWig
# 
# track AH11H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 11h,control,AH11H00C1
# parent 11h
# color 0,178,31
# type bigWig
# 
# track AH11H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 11h,regeneration,AH11H00S1
# parent 11h
# color 255,138,31
# type bigWig
# 
# track AH16H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 0h,control,AH16H00C1
# parent 0h
# color 0,178,31
# type bigWig
# 
# track AH16H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 0h,regeneration,AH16H00S1
# parent 0h
# color 255,138,31
# type bigWig
# 
# track AH16H15C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 15h,control,AH16H15C1
# parent 15h
# color 0,178,31
# type bigWig
# 
# track AH16H15S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 15h,regeneration,AH16H15S1
# parent 15h
# color 255,138,31
# type bigWig
# 
# track AH16H25C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 25h,control,AH16H25C1
# parent 25h
# color 0,178,31
# type bigWig
# 
# track AH16H25S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
# shortLabel 25h,regeneration,AH16H25S1
# parent 25h
# color 255,138,31
# type bigWig



track NF:bw
dragAndDrop subTracks
compositeTrack on
shortLabel NF:bw
longLabel NF:bw
type bigWig
parent ATACSeq
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
_L3_control=_L3_control \
11h=11h \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
_L3_control=_L3_control \
control=control \
regeneration=regeneration;
subGroup3 labExpId labExpId \
AE0000001=AE0000001 \
AE0000002=AE0000002 \
AH00096C1=AH00096C1 \
AH16H25C2=AH16H25C2 \
AH16H00C1=AH16H00C1 \
AH16H00S1=AH16H00S1 \
AH16H25C1=AH16H25C1 \
AH11H00C1=AH11H00C1 \
AH16H15S2=AH16H15S2 \
AH16H25S1=AH16H25S1 \
AH16H25S2=AH16H25S2 \
AH16H00C2=AH16H00C2 \
AH16H15S1=AH16H15S1 \
AH11H00S1=AH11H00S1 \
AH11H00C2=AH11H00C2 \
AH16H15C1=AH16H15C1 \
AH16H15C2=AH16H15C2 \
AH00096C2=AH00096C2 \
AH16H00S2=AH16H00S2 \
AH11H00S2=AH11H00S2;
subGroup4 fraction fraction \
nucl-free=nucl-free;
sortOrder time=+ sampleType=+ labExpId=+ fraction=+
dimensions dimX=time dimY=sampleType

track AE0000001.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AE0000001.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "_L3_eye,_L3_eye,AE0000001,nucl-free"
parent NF:bw
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control labExpId=AE0000001 fraction=nucl-free

track AE0000002.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AE0000002.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "_L3_eye,_L3_eye,AE0000002,nucl-free"
parent NF:bw
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control labExpId=AE0000002 fraction=nucl-free


track AH00096C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "_L3_control,_L3_control,AH00096C1,nucl-free"
parent NF:bw
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C1 fraction=nucl-free

track AH00096C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "_L3_control,_L3_control,AH00096C2,nucl-free"
parent NF:bw
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C2 fraction=nucl-free

track AH11H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,control,AH11H00C1,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=11h sampleType=control labExpId=AH11H00C1 fraction=nucl-free

track AH11H00C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,control,AH11H00C2,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=11h sampleType=control labExpId=AH11H00C2 fraction=nucl-free

track AH11H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,regeneration,AH11H00S1,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=11h sampleType=regeneration labExpId=AH11H00S1 fraction=nucl-free

track AH11H00S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,regeneration,AH11H00S2,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=11h sampleType=regeneration labExpId=AH11H00S2 fraction=nucl-free

track AH16H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,control,AH16H00C1,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=0h sampleType=control labExpId=AH16H00C1 fraction=nucl-free

track AH16H00C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,control,AH16H00C2,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=0h sampleType=control labExpId=AH16H00C2 fraction=nucl-free

track AH16H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,regeneration,AH16H00S1,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=0h sampleType=regeneration labExpId=AH16H00S1 fraction=nucl-free

track AH16H00S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,regeneration,AH16H00S2,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=0h sampleType=regeneration labExpId=AH16H00S2 fraction=nucl-free

track AH16H15C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,control,AH16H15C1,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=15h sampleType=control labExpId=AH16H15C1 fraction=nucl-free

track AH16H15C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,control,AH16H15C2,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=15h sampleType=control labExpId=AH16H15C2 fraction=nucl-free

track AH16H15S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,regeneration,AH16H15S1,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=15h sampleType=regeneration labExpId=AH16H15S1 fraction=nucl-free

track AH16H15S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,regeneration,AH16H15S2,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=15h sampleType=regeneration labExpId=AH16H15S2 fraction=nucl-free

track AH16H25C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,control,AH16H25C1,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=25h sampleType=control labExpId=AH16H25C1 fraction=nucl-free

track AH16H25C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,control,AH16H25C2,nucl-free"
parent NF:bw
color 0,178,31
type bigWig
subGroups time=25h sampleType=control labExpId=AH16H25C2 fraction=nucl-free

track AH16H25S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S1.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,regeneration,AH16H25S1,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=25h sampleType=regeneration labExpId=AH16H25S1 fraction=nucl-free

track AH16H25S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S2.subset-chr.nucl-free.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,regeneration,AH16H25S2,nucl-free"
parent NF:bw
color 255,138,31
type bigWig
subGroups time=25h sampleType=regeneration labExpId=AH16H25S2 fraction=nucl-free



track ATACSeq:MN
dragAndDrop subTracks
compositeTrack on
shortLabel MN:bw
longLabel ATACSeq:MN
parent ATACSeq 
type bigWig
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
_L3_control=_L3_control \
11h=11h \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
_L3_control=_L3_control \
control=control \
regeneration=regeneration;
subGroup3 labExpId labExpId \
AH00096C1=AH00096C1 \
AH16H25S2=AH16H25S2 \
AH16H00C1=AH16H00C1 \
AH16H00S1=AH16H00S1 \
AH16H15S2=AH16H15S2 \
AH16H25S1=AH16H25S1 \
AH16H15S1=AH16H15S1 \
AH16H25C2=AH16H25C2 \
AH16H00C2=AH16H00C2 \
AH11H00C1=AH11H00C1 \
AH16H15C1=AH16H15C1 \
AH11H00S1=AH11H00S1 \
AH11H00C2=AH11H00C2 \
AH00096C2=AH00096C2 \
AH16H15C2=AH16H15C2 \
AH16H00S2=AH16H00S2 \
AH16H25C1=AH16H25C1 \
AH11H00S2=AH11H00S2;
subGroup4 fraction fraction \
mononucleosome=mononucleosome;
sortOrder time=+ sampleType=+ labExpId=+ fraction=+
dimensions dimX=time dimY=sampleType

track AH00096C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "_L3_control,_L3_control,AH00096C1,mononucleosome"
parent ATACSeq:MN
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C1 fraction=mononucleosome

track AH00096C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "_L3_control,_L3_control,AH00096C2,mononucleosome"
parent ATACSeq:MN
color 0,51,0
type bigWig
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C2 fraction=mononucleosome

track AH11H00C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,control,AH11H00C1,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=11h sampleType=control labExpId=AH11H00C1 fraction=mononucleosome

track AH11H00C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,control,AH11H00C2,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=11h sampleType=control labExpId=AH11H00C2 fraction=mononucleosome

track AH11H00S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,regeneration,AH11H00S1,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=11h sampleType=regeneration labExpId=AH11H00S1 fraction=mononucleosome

track AH11H00S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH11H00S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "11h,regeneration,AH11H00S2,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=11h sampleType=regeneration labExpId=AH11H00S2 fraction=mononucleosome

track AH16H00C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,control,AH16H00C1,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=0h sampleType=control labExpId=AH16H00C1 fraction=mononucleosome

track AH16H00C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,control,AH16H00C2,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=0h sampleType=control labExpId=AH16H00C2 fraction=mononucleosome

track AH16H00S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,regeneration,AH16H00S1,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=0h sampleType=regeneration labExpId=AH16H00S1 fraction=mononucleosome

track AH16H00S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "0h,regeneration,AH16H00S2,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=0h sampleType=regeneration labExpId=AH16H00S2 fraction=mononucleosome

track AH16H15C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,control,AH16H15C1,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=15h sampleType=control labExpId=AH16H15C1 fraction=mononucleosome

track AH16H15C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,control,AH16H15C2,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=15h sampleType=control labExpId=AH16H15C2 fraction=mononucleosome

track AH16H15S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,regeneration,AH16H15S1,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=15h sampleType=regeneration labExpId=AH16H15S1 fraction=mononucleosome

track AH16H15S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "15h,regeneration,AH16H15S2,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=15h sampleType=regeneration labExpId=AH16H15S2 fraction=mononucleosome

track AH16H25C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,control,AH16H25C1,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=25h sampleType=control labExpId=AH16H25C1 fraction=mononucleosome

track AH16H25C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,control,AH16H25C2,mononucleosome"
parent ATACSeq:MN
color 0,178,31
type bigWig
subGroups time=25h sampleType=control labExpId=AH16H25C2 fraction=mononucleosome

track AH16H25S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S1.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,regeneration,AH16H25S1,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=25h sampleType=regeneration labExpId=AH16H25S1 fraction=mononucleosome

track AH16H25S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S2.subset-chr.mononucleosome.macsv2.1.1.pe.pileup_signal.bw
shortLabel "25h,regeneration,AH16H25S2,mononucleosome"
parent ATACSeq:MN
color 255,138,31
type bigWig
subGroups time=25h sampleType=regeneration labExpId=AH16H25S2 fraction=mononucleosome



track ATACSeq:peakNF
dragAndDrop subTracks
compositeTrack on
shortLabel NF:peak
longLabel ATACSeq:peakNF
parent ATACSeq
type bigBed
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
_L3_control=_L3_control \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
_L3_control=_L3_control \
control=control \
regeneration=regeneration;
subGroup3 labExpId labExpId \
AH00096C1=AH00096C1 \
AH16H25S2=AH16H25S2 \
AH16H00C1=AH16H00C1 \
AH16H00S1=AH16H00S1 \
AH16H00C2=AH16H00C2 \
AH16H25S1=AH16H25S1 \
AH16H15S1=AH16H15S1 \
AH16H15S2=AH16H15S2 \
AH16H25C2=AH16H25C2 \
AH00096C2=AH00096C2 \
AH16H25C1=AH16H25C1 \
AH16H15C1=AH16H15C1 \
AH16H15C2=AH16H15C2 \
AH16H00S2=AH16H00S2;
subGroup4 fraction fraction \
nucl-free=nucl-free;
sortOrder time=+ sampleType=+ labExpId=+ fraction=+
dimensions dimX=time dimY=sampleType

track AH00096C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "_L3_control,_L3_control,AH00096C1,nucl-free"
parent ATACSeq:peakNF
color 0,51,0
type bigBed
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C1 fraction=nucl-free

track AH00096C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "_L3_control,_L3_control,AH00096C2,nucl-free"
parent ATACSeq:peakNF
color 0,51,0
type bigBed
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C2 fraction=nucl-free

track AH16H00C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,control,AH16H00C1,nucl-free"
parent ATACSeq:peakNF
color 0,178,31
type bigBed
subGroups time=0h sampleType=control labExpId=AH16H00C1 fraction=nucl-free

track AH16H00C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,control,AH16H00C2,nucl-free"
parent ATACSeq:peakNF
color 0,178,31
type bigBed
subGroups time=0h sampleType=control labExpId=AH16H00C2 fraction=nucl-free

track AH16H00S1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,regeneration,AH16H00S1,nucl-free"
parent ATACSeq:peakNF
color 255,138,31
type bigBed
subGroups time=0h sampleType=regeneration labExpId=AH16H00S1 fraction=nucl-free

track AH16H00S2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,regeneration,AH16H00S2,nucl-free"
parent ATACSeq:peakNF
color 255,138,31
type bigBed
subGroups time=0h sampleType=regeneration labExpId=AH16H00S2 fraction=nucl-free

track AH16H15C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,control,AH16H15C1,nucl-free"
parent ATACSeq:peakNF
color 0,178,31
type bigBed
subGroups time=15h sampleType=control labExpId=AH16H15C1 fraction=nucl-free

track AH16H15C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,control,AH16H15C2,nucl-free"
parent ATACSeq:peakNF
color 0,178,31
type bigBed
subGroups time=15h sampleType=control labExpId=AH16H15C2 fraction=nucl-free

track AH16H15S1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,regeneration,AH16H15S1,nucl-free"
parent ATACSeq:peakNF
color 255,138,31
type bigBed
subGroups time=15h sampleType=regeneration labExpId=AH16H15S1 fraction=nucl-free

track AH16H15S2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,regeneration,AH16H15S2,nucl-free"
parent ATACSeq:peakNF
color 255,138,31
type bigBed
subGroups time=15h sampleType=regeneration labExpId=AH16H15S2 fraction=nucl-free

track AH16H25C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,control,AH16H25C1,nucl-free"
parent ATACSeq:peakNF
color 0,178,31
type bigBed
subGroups time=25h sampleType=control labExpId=AH16H25C1 fraction=nucl-free

track AH16H25C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,control,AH16H25C2,nucl-free"
parent ATACSeq:peakNF
color 0,178,31
type bigBed
subGroups time=25h sampleType=control labExpId=AH16H25C2 fraction=nucl-free

track AH16H25S1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S1.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,regeneration,AH16H25S1,nucl-free"
parent ATACSeq:peakNF
color 255,138,31
type bigBed
subGroups time=25h sampleType=regeneration labExpId=AH16H25S1 fraction=nucl-free

track AH16H25S2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S2.subset-chr.nucl-free.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,regeneration,AH16H25S2,nucl-free"
parent ATACSeq:peakNF
color 255,138,31
type bigBed
subGroups time=25h sampleType=regeneration labExpId=AH16H25S2 fraction=nucl-free



track ATACSeq:peakMN
dragAndDrop subTracks
compositeTrack on
shortLabel MN:peak
longLabel ATACSeq:peakMN
parent ATACSeq
type bigBed
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
_L3_control=_L3_control \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
_L3_control=_L3_control \
control=control \
regeneration=regeneration;
subGroup3 labExpId labExpId \
AH00096C1=AH00096C1 \
AH16H25C2=AH16H25C2 \
AH16H00C1=AH16H00C1 \
AH16H00S1=AH16H00S1 \
AH16H15S2=AH16H15S2 \
AH16H25S1=AH16H25S1 \
AH16H00C2=AH16H00C2 \
AH16H25S2=AH16H25S2 \
AH16H15C1=AH16H15C1 \
AH00096C2=AH00096C2 \
AH16H25C1=AH16H25C1 \
AH16H15S1=AH16H15S1 \
AH16H15C2=AH16H15C2 \
AH16H00S2=AH16H00S2;
subGroup4 fraction fraction \
mononucleosome=mononucleosome;
sortOrder time=+ sampleType=+ labExpId=+ fraction=+
dimensions dimX=time dimY=sampleType

track AH00096C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "_L3_control,_L3_control,AH00096C1,mononucleosome"
parent ATACSeq:peakMN
color 0,51,0
type bigBed
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C1 fraction=mononucleosome

track AH00096C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH00096C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "_L3_control,_L3_control,AH00096C2,mononucleosome"
parent ATACSeq:peakMN
color 0,51,0
type bigBed
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C2 fraction=mononucleosome

track AH16H00C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,control,AH16H00C1,mononucleosome"
parent ATACSeq:peakMN
color 0,178,31
type bigBed
subGroups time=0h sampleType=control labExpId=AH16H00C1 fraction=mononucleosome

track AH16H00C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,control,AH16H00C2,mononucleosome"
parent ATACSeq:peakMN
color 0,178,31
type bigBed
subGroups time=0h sampleType=control labExpId=AH16H00C2 fraction=mononucleosome

track AH16H00S1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,regeneration,AH16H00S1,mononucleosome"
parent ATACSeq:peakMN
color 255,138,31
type bigBed
subGroups time=0h sampleType=regeneration labExpId=AH16H00S1 fraction=mononucleosome

track AH16H00S2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H00S2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "0h,regeneration,AH16H00S2,mononucleosome"
parent ATACSeq:peakMN
color 255,138,31
type bigBed
subGroups time=0h sampleType=regeneration labExpId=AH16H00S2 fraction=mononucleosome

track AH16H15C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,control,AH16H15C1,mononucleosome"
parent ATACSeq:peakMN
color 0,178,31
type bigBed
subGroups time=15h sampleType=control labExpId=AH16H15C1 fraction=mononucleosome

track AH16H15C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,control,AH16H15C2,mononucleosome"
parent ATACSeq:peakMN
color 0,178,31
type bigBed
subGroups time=15h sampleType=control labExpId=AH16H15C2 fraction=mononucleosome

track AH16H15S1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,regeneration,AH16H15S1,mononucleosome"
parent ATACSeq:peakMN
color 255,138,31
type bigBed
subGroups time=15h sampleType=regeneration labExpId=AH16H15S1 fraction=mononucleosome

track AH16H15S2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H15S2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "15h,regeneration,AH16H15S2,mononucleosome"
parent ATACSeq:peakMN
color 255,138,31
type bigBed
subGroups time=15h sampleType=regeneration labExpId=AH16H15S2 fraction=mononucleosome

track AH16H25C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,control,AH16H25C1,mononucleosome"
parent ATACSeq:peakMN
color 0,178,31
type bigBed
subGroups time=25h sampleType=control labExpId=AH16H25C1 fraction=mononucleosome

track AH16H25C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25C2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,control,AH16H25C2,mononucleosome"
parent ATACSeq:peakMN
color 0,178,31
type bigBed
subGroups time=25h sampleType=control labExpId=AH16H25C2 fraction=mononucleosome

track AH16H25S1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S1.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,regeneration,AH16H25S1,mononucleosome"
parent ATACSeq:peakMN
color 255,138,31
type bigBed
subGroups time=25h sampleType=regeneration labExpId=AH16H25S1 fraction=mononucleosome

track AH16H25S2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/AH16H25S2.subset-chr.mononucleosome.macsv2.1.1.pe_peaks.narrowPeak.bb
shortLabel "25h,regeneration,AH16H25S2,mononucleosome"
parent ATACSeq:peakMN
color 255,138,31
type bigBed
subGroups time=25h sampleType=regeneration labExpId=AH16H25S2 fraction=mononucleosome




track ATACSeq:merged-peakNF
dragAndDrop subTracks
compositeTrack on
shortLabel ATACSeq:merged-peakNF
longLabel ATACSeq:merged-peakNF
parent ATACSeq
type bigBed
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 2
subGroup1 time time \
_L3_control=_L3_control \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
control=control \
_L3_control=_L3_control \
regeneration=regeneration;
subGroup3 labExpId labExpId \
AH16H00C1X2=AH16H00C1X2 \
AH16H15S1X2=AH16H15S1X2 \
AH16H15C1X2=AH16H15C1X2 \
AH16H00S1X2=AH16H00S1X2 \
AH00096C1X2=AH00096C1X2 \
AH16H25C1X2=AH16H25C1X2 \
AH16H25S1X2=AH16H25S1X2;
subGroup4 fraction fraction \
nucl-free=nucl-free;
sortOrder time=+ sampleType=+ labExpId=+ fraction=+
dimensions dimX=time dimY=sampleType

track NF.AH00096C1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH00096C1X2.merged.bb
shortLabel "_L3_control,_L3_control,AH00096C1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 0,51,0
type bigBed
subGroups time=_L3_control sampleType=_L3_control labExpId=AH00096C1X2 fraction=nucl-free

track NF.AH16H00C1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH16H00C1X2.merged.bb
shortLabel "0h,control,AH16H00C1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 0,178,31
type bigBed
subGroups time=0h sampleType=control labExpId=AH16H00C1X2 fraction=nucl-free

track NF.AH16H00S1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH16H00S1X2.merged.bb
shortLabel "0h,regeneration,AH16H00S1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 255,138,31
type bigBed
subGroups time=0h sampleType=regeneration labExpId=AH16H00S1X2 fraction=nucl-free

track NF.AH16H15C1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH16H15C1X2.merged.bb
shortLabel "15h,control,AH16H15C1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 0,178,31
type bigBed
subGroups time=15h sampleType=control labExpId=AH16H15C1X2 fraction=nucl-free

track NF.AH16H15S1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH16H15S1X2.merged.bb
shortLabel "15h,regeneration,AH16H15S1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 255,138,31
type bigBed
subGroups time=15h sampleType=regeneration labExpId=AH16H15S1X2 fraction=nucl-free

track NF.AH16H25C1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH16H25C1X2.merged.bb
shortLabel "25h,control,AH16H25C1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 0,178,31
type bigBed
subGroups time=25h sampleType=control labExpId=AH16H25C1X2 fraction=nucl-free

track NF.AH16H25S1X2.merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ATACSeq/NF.AH16H25S1X2.merged.bb
shortLabel "25h,regeneration,AH16H25S1X2,nucl-free"
parent ATACSeq:merged-peakNF
color 255,138,31
type bigBed
subGroups time=25h sampleType=regeneration labExpId=AH16H25S1X2 fraction=nucl-free





########################################################################################################
########################################################################################################
##################### CROC #############################################################################
########################################################################################################
########################################################################################################

track CROC
dragAndDrop subTracks
allButtonPair on
compositeTrack on
shortLabel CROC
longLabel CROC
type bigBed
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 labExpId labExpId \
downregulation_CROC=downregulation_CROC \
gene_15h_downregulation_CROC=gene_15h_downregulation_CROC \
gene_0h_upregulation_CROC=gene_0h_upregulation_CROC \
gene_25h_upregulation_CROC=gene_25h_upregulation_CROC \
25h_upregulation_CROC=25h_upregulation_CROC \
gene_15h_upregulation_CROC=gene_15h_upregulation_CROC \
15h_upregulation_CROC=15h_upregulation_CROC \
0h_upregulation_CROC=0h_upregulation_CROC \
gene_25h_downregulation_CROC=gene_25h_downregulation_CROC \
gene_0h_downregulation_CROC=gene_0h_downregulation_CROC;
sortOrder labExpId=+

track fc_mRNA_0h_upregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/fc_mRNA_0h_upregulation.bb
shortLabel "0h_upregulation_CROC"
parent CROC
color 103,0,31
type bigBed
subGroups labExpId=0h_upregulation_CROC

track fc_mRNA_15h_upregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/fc_mRNA_15h_upregulation.bb
shortLabel "15h_upregulation_CROC"
parent CROC
color 103,0,31
type bigBed
subGroups labExpId=15h_upregulation_CROC

track fc_mRNA_25h_upregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/fc_mRNA_25h_upregulation.bb
shortLabel "25h_upregulation_CROC"
parent CROC
color 103,0,31
type bigBed
subGroups labExpId=25h_upregulation_CROC

track fc_mRNA_dowregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/fc_mRNA_dowregulation.bb
shortLabel "downregulation_CROC"
parent CROC
color 5,48,97
type bigBed
subGroups labExpId=downregulation_CROC

track gene_0h_downregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/gene_0h_downregulation.bb
shortLabel "gene_0h_downregulation_CROC"
parent CROC
color 5,48,97
type bigBed
subGroups labExpId=gene_0h_downregulation_CROC

track gene_0h_upregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/gene_0h_upregulation.bb
shortLabel "gene_0h_upregulation_CROC"
parent CROC
color 103,0,31
type bigBed
subGroups labExpId=gene_0h_upregulation_CROC

track gene_15h_downregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/gene_15h_downregulation.bb
shortLabel "gene_15h_downregulation_CROC"
parent CROC
color 5,48,97
type bigBed
subGroups labExpId=gene_15h_downregulation_CROC

track gene_15h_upregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/gene_15h_upregulation.bb
shortLabel "gene_15h_upregulation_CROC"
parent CROC
color 103,0,31
type bigBed
subGroups labExpId=gene_15h_upregulation_CROC

track gene_25h_downregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/gene_25h_downregulation.bb
shortLabel "gene_25h_downregulation_CROC"
parent CROC
color 5,48,97
type bigBed
subGroups labExpId=gene_25h_downregulation_CROC

track gene_25h_upregulation.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/CROC/gene_25h_upregulation.bb
shortLabel "gene_25h_upregulation_CROC"
parent CROC
color 103,0,31
type bigBed
subGroups labExpId=gene_25h_upregulation_CROC




#################################
# literature
#################################
track ChIPs-TFs
superTrack on show
shortLabel more
longLabel ChIPs-TFs-literature


track chips-bw
dragAndDrop subTracks
allButtonPair on
compositeTrack on
shortLabel chips-bw
longLabel chips-bw
parent ChIPs-TFs
type bigWig
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 labExpId labExpId \
Pol2Ser5P_ChIPSeq_WID_SRR065629=Pol2Ser5P_ChIPSeq_WID_SRR065629 \
PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980=PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980 \
sd_EID_Rep1_Ikmi-et-al-2014=sd_EID_Rep1_Ikmi-et-al-2014 \
Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811=Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811 \
K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978=K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978 \
Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652=Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652 \
H3K27m3_Deplacke_WID_SRR1525220=H3K27m3_Deplacke_WID_SRR1525220 \
H3K36me3_ChIPSeq_WID_SRR065627=H3K36me3_ChIPSeq_WID_SRR065627 \
BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743=BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743 \
K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976=K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976 \
H3K27me3_ChIPSeq_WID_SRR065626=H3K27me3_ChIPSeq_WID_SRR065626 \
PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990=PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990 \
V5-polII_EID_Rep1_Ikmi-et-al-2014=V5-polII_EID_Rep1_Ikmi-et-al-2014 \
RNApolII_Deplacke_WID_SRR1525223=RNApolII_Deplacke_WID_SRR1525223 \
PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982=PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982 \
PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988=PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988 \
K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986=K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986 \
H3K4me3_ChIPSeq_WID_SRR065625=H3K4me3_ChIPSeq_WID_SRR065625 \
RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108=RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108 \
PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981=PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981 \
Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653=Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653 \
H3K4me1_WID_R1_SRR927432=H3K4me1_WID_R1_SRR927432 \
PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979=PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979 \
K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977=K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977 \
mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708=mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708 \
K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985=K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985 \
H3K4m1_Deplacke_WID_SRR1525218=H3K4m1_Deplacke_WID_SRR1525218 \
H3K27ac_EID_R1_SRR927435=H3K27ac_EID_R1_SRR927435 \
BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742=BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742 \
H3_WING_ChIPSeq_R2_SRR646465=H3_WING_ChIPSeq_R2_SRR646465 \
Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812=Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812 \
H3K9ac_WING_ChIPSeq_SRR1220295=H3K9ac_WING_ChIPSeq_SRR1220295 \
GAF_WID_Rep1_Oh-et-al-2013_SRR504955=GAF_WID_Rep1_Oh-et-al-2013_SRR504955 \
H3K79m1-2-3_Deplacke_WID_SRR1525222=H3K79m1-2-3_Deplacke_WID_SRR1525222 \
yki_EID_Rep1_Ikmi-et-al-2014=yki_EID_Rep1_Ikmi-et-al-2014 \
CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323=CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323 \
PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987=PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987 \
GAF_WID_Rep2_Oh-et-al-2013_SRR504956=GAF_WID_Rep2_Oh-et-al-2013_SRR504956 \
K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975=K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975 \
PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989=PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989 \
H3K4me3_EYE_ChIPSeq_SRR646468=H3K4me3_EYE_ChIPSeq_SRR646468 \
H3K27ac_WID_R1_SRR927433=H3K27ac_WID_R1_SRR927433 \
Yki_WID_Rep1_Oh-et-al-2013_SRR504957=Yki_WID_Rep1_Oh-et-al-2013_SRR504957 \
mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709=mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709 \
H3_WING_ChIPSeq_R1_SRR646464=H3_WING_ChIPSeq_R1_SRR646464 \
ASH2_WID_Rep1_Perez-et-al-2011_SRR065624=ASH2_WID_Rep1_Perez-et-al-2011_SRR065624 \
H3K27Ac_Deplacke_WID_SRR1525221=H3K27Ac_Deplacke_WID_SRR1525221 \
H3K4me1_EID_R1_SRR927434=H3K4me1_EID_R1_SRR927434 \
Pol2Ser2P_ChIPSeq_WID_SRR065628=Pol2Ser2P_ChIPSeq_WID_SRR065628 \
H3K36me3_EYE_ChIPSeq_SRR646467=H3K36me3_EYE_ChIPSeq_SRR646467 \
BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745=BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745 \
RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109=RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109 \
BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744=BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744 \
H3K4m2-3_Deplacke_WID_SRR1525219=H3K4m2-3_Deplacke_WID_SRR1525219;
sortOrder labExpId=+

track H3K27Ac_Deplacke_WID_SRR1525221.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K27Ac_Deplacke_WID_SRR1525221.pileup_signal.bw
shortLabel "H3K27Ac_Deplacke_WID_SRR1525221"
parent chips-bw
color 0,31,255
type bigWig
subGroups labExpId=H3K27Ac_Deplacke_WID_SRR1525221

track H3K27ac_EID_R1_SRR927435.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K27ac_EID_R1_SRR927435.pileup_signal.bw
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parent chips-bw
color 0,50,255
type bigWig
subGroups labExpId=H3K27ac_EID_R1_SRR927435

track H3K27ac_WID_R1_SRR927433.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K27ac_WID_R1_SRR927433.pileup_signal.bw
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parent chips-bw
color 0,67,255
type bigWig
subGroups labExpId=H3K27ac_WID_R1_SRR927433

track H3K27m3_Deplacke_WID_SRR1525220.pileup_signal.bw
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parent chips-bw
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subGroups labExpId=H3K27m3_Deplacke_WID_SRR1525220

track H3K27me3_ChIPSeq_WID_SRR065626.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K27me3_ChIPSeq_WID_SRR065626.pileup_signal.bw
shortLabel "H3K27me3_ChIPSeq_WID_SRR065626"
parent chips-bw
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type bigWig
subGroups labExpId=H3K27me3_ChIPSeq_WID_SRR065626

track H3K36me3_ChIPSeq_WID_SRR065627.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K36me3_ChIPSeq_WID_SRR065627.pileup_signal.bw
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parent chips-bw
color 0,122,255
type bigWig
subGroups labExpId=H3K36me3_ChIPSeq_WID_SRR065627

track H3K36me3_EYE_ChIPSeq_SRR646467.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K36me3_EYE_ChIPSeq_SRR646467.pileup_signal.bw
shortLabel "H3K36me3_EYE_ChIPSeq_SRR646467"
parent chips-bw
color 0,139,255
type bigWig
subGroups labExpId=H3K36me3_EYE_ChIPSeq_SRR646467

track H3K4m1_Deplacke_WID_SRR1525218.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K4m1_Deplacke_WID_SRR1525218.pileup_signal.bw
shortLabel "H3K4m1_Deplacke_WID_SRR1525218"
parent chips-bw
color 0,158,255
type bigWig
subGroups labExpId=H3K4m1_Deplacke_WID_SRR1525218

track H3K4m2-3_Deplacke_WID_SRR1525219.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K4m2-3_Deplacke_WID_SRR1525219.pileup_signal.bw
shortLabel "H3K4m2-3_Deplacke_WID_SRR1525219"
parent chips-bw
color 0,175,255
type bigWig
subGroups labExpId=H3K4m2-3_Deplacke_WID_SRR1525219

track H3K4me1_EID_R1_SRR927434.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K4me1_EID_R1_SRR927434.pileup_signal.bw
shortLabel "H3K4me1_EID_R1_SRR927434"
parent chips-bw
color 0,193,255
type bigWig
subGroups labExpId=H3K4me1_EID_R1_SRR927434

track H3K4me1_WID_R1_SRR927432.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K4me1_WID_R1_SRR927432.pileup_signal.bw
shortLabel "H3K4me1_WID_R1_SRR927432"
parent chips-bw
color 0,211,255
type bigWig
subGroups labExpId=H3K4me1_WID_R1_SRR927432

track H3K4me3_ChIPSeq_WID_SRR065625.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K4me3_ChIPSeq_WID_SRR065625.pileup_signal.bw
shortLabel "H3K4me3_ChIPSeq_WID_SRR065625"
parent chips-bw
color 0,229,255
type bigWig
subGroups labExpId=H3K4me3_ChIPSeq_WID_SRR065625

track H3K4me3_EYE_ChIPSeq_SRR646468.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K4me3_EYE_ChIPSeq_SRR646468.pileup_signal.bw
shortLabel "H3K4me3_EYE_ChIPSeq_SRR646468"
parent chips-bw
color 0,255,77
type bigWig
subGroups labExpId=H3K4me3_EYE_ChIPSeq_SRR646468

track H3K79m1-2-3_Deplacke_WID_SRR1525222.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K79m1-2-3_Deplacke_WID_SRR1525222.pileup_signal.bw
shortLabel "H3K79m1-2-3_Deplacke_WID_SRR1525222"
parent chips-bw
color 0,255,56
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subGroups labExpId=H3K79m1-2-3_Deplacke_WID_SRR1525222

track H3K9ac_WING_ChIPSeq_SRR1220295.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3K9ac_WING_ChIPSeq_SRR1220295.pileup_signal.bw
shortLabel "H3K9ac_WING_ChIPSeq_SRR1220295"
parent chips-bw
color 0,255,36
type bigWig
subGroups labExpId=H3K9ac_WING_ChIPSeq_SRR1220295

track H3_WING_ChIPSeq_R1_SRR646464.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3_WING_ChIPSeq_R1_SRR646464.pileup_signal.bw
shortLabel "H3_WING_ChIPSeq_R1_SRR646464"
parent chips-bw
color 0,255,15
type bigWig
subGroups labExpId=H3_WING_ChIPSeq_R1_SRR646464

track H3_WING_ChIPSeq_R2_SRR646465.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/H3_WING_ChIPSeq_R2_SRR646465.pileup_signal.bw
shortLabel "H3_WING_ChIPSeq_R2_SRR646465"
parent chips-bw
color 0,255,15
type bigWig
subGroups labExpId=H3_WING_ChIPSeq_R2_SRR646465

track Pol2Ser2P_ChIPSeq_WID_SRR065628.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/Pol2Ser2P_ChIPSeq_WID_SRR065628.pileup_signal.bw
shortLabel "Pol2Ser2P_ChIPSeq_WID_SRR065628"
parent chips-bw
color 168,255,0
type bigWig
subGroups labExpId=Pol2Ser2P_ChIPSeq_WID_SRR065628

track Pol2Ser5P_ChIPSeq_WID_SRR065629.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/Pol2Ser5P_ChIPSeq_WID_SRR065629.pileup_signal.bw
shortLabel "Pol2Ser5P_ChIPSeq_WID_SRR065629"
parent chips-bw
color 189,255,0
type bigWig
subGroups labExpId=Pol2Ser5P_ChIPSeq_WID_SRR065629

track RNApolII_Deplacke_WID_SRR1525223.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/RNApolII_Deplacke_WID_SRR1525223.pileup_signal.bw
shortLabel "RNApolII_Deplacke_WID_SRR1525223"
parent chips-bw
color 209,255,0
type bigWig
subGroups labExpId=RNApolII_Deplacke_WID_SRR1525223

track chip_ASH2_WID_Rep1_Perez-et-al-2011_SRR065624.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_ASH2_WID_Rep1_Perez-et-al-2011_SRR065624.pileup_signal.bw
shortLabel "ASH2_WID_Rep1_Perez-et-al-2011_SRR065624"
parent chips-bw
color 76,0,255
type bigWig
subGroups labExpId=ASH2_WID_Rep1_Perez-et-al-2011_SRR065624

track chip_BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742.pileup_signal.bw
shortLabel "BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742"
parent chips-bw
color 59,0,255
type bigWig
subGroups labExpId=BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742

track chip_BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743.pileup_signal.bw
shortLabel "BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743"
parent chips-bw
color 59,0,255
type bigWig
subGroups labExpId=BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743

track chip_BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744.pileup_signal.bw
shortLabel "BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744"
parent chips-bw
color 59,0,255
type bigWig
subGroups labExpId=BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744

track chip_BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745.pileup_signal.bw
shortLabel "BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745"
parent chips-bw
color 59,0,255
type bigWig
subGroups labExpId=BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745

track chip_Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652.pileup_signal.bw
shortLabel "Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652"
parent chips-bw
color 40,0,255
type bigWig
subGroups labExpId=Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652

track chip_CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323.pileup_signal.bw
shortLabel "CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323"
parent chips-bw
color 22,0,255
type bigWig
subGroups labExpId=CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323

track chip_Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653.pileup_signal.bw
shortLabel "Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653"
parent chips-bw
color 4,0,255
type bigWig
subGroups labExpId=Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653

track chip_GAF_WID_Rep1_Oh-et-al-2013_SRR504955.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_GAF_WID_Rep1_Oh-et-al-2013_SRR504955.pileup_signal.bw
shortLabel "GAF_WID_Rep1_Oh-et-al-2013_SRR504955"
parent chips-bw
color 0,13,255
type bigWig
subGroups labExpId=GAF_WID_Rep1_Oh-et-al-2013_SRR504955

track chip_GAF_WID_Rep2_Oh-et-al-2013_SRR504956.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_GAF_WID_Rep2_Oh-et-al-2013_SRR504956.pileup_signal.bw
shortLabel "GAF_WID_Rep2_Oh-et-al-2013_SRR504956"
parent chips-bw
color 0,13,255
type bigWig
subGroups labExpId=GAF_WID_Rep2_Oh-et-al-2013_SRR504956

track chip_K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975.pileup_signal.bw
shortLabel "K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975"
parent chips-bw
color 5,255,0
type bigWig
subGroups labExpId=K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975

track chip_K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976.pileup_signal.bw
shortLabel "K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976"
parent chips-bw
color 5,255,0
type bigWig
subGroups labExpId=K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976

track chip_K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977.pileup_signal.bw
shortLabel "K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977"
parent chips-bw
color 26,255,0
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subGroups labExpId=K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977

track chip_K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978.pileup_signal.bw
shortLabel "K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978"
parent chips-bw
color 26,255,0
type bigWig
subGroups labExpId=K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978

track chip_K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985.pileup_signal.bw
shortLabel "K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985"
parent chips-bw
color 46,255,0
type bigWig
subGroups labExpId=K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985

track chip_K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986.pileup_signal.bw
shortLabel "K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986"
parent chips-bw
color 46,255,0
type bigWig
subGroups labExpId=K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986

track chip_Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811.pileup_signal.bw
shortLabel "Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811"
parent chips-bw
color 66,255,0
type bigWig
subGroups labExpId=Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811

track chip_Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812.pileup_signal.bw
shortLabel "Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812"
parent chips-bw
color 66,255,0
type bigWig
subGroups labExpId=Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812

track chip_PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979.pileup_signal.bw
shortLabel "PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979"
parent chips-bw
color 87,255,0
type bigWig
subGroups labExpId=PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979

track chip_PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980.pileup_signal.bw
shortLabel "PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980"
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color 87,255,0
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subGroups labExpId=PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980

track chip_PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987.pileup_signal.bw
shortLabel "PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987"
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subGroups labExpId=PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987

track chip_PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988.pileup_signal.bw
shortLabel "PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988"
parent chips-bw
color 107,255,0
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subGroups labExpId=PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988

track chip_PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981.pileup_signal.bw
shortLabel "PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981"
parent chips-bw
color 128,255,0
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subGroups labExpId=PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981

track chip_PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982.pileup_signal.bw
shortLabel "PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982"
parent chips-bw
color 128,255,0
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subGroups labExpId=PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982

track chip_PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989.pileup_signal.bw
shortLabel "PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989"
parent chips-bw
color 148,255,0
type bigWig
subGroups labExpId=PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989

track chip_PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990.pileup_signal.bw
shortLabel "PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990"
parent chips-bw
color 148,255,0
type bigWig
subGroups labExpId=PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990

track chip_RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108.pileup_signal.bw
shortLabel "RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108"
parent chips-bw
color 230,255,0
type bigWig
subGroups labExpId=RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108

track chip_RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109.pileup_signal.bw
shortLabel "RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109"
parent chips-bw
color 230,255,0
type bigWig
subGroups labExpId=RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109

track chip_V5-polII_EID_Rep1_Ikmi-et-al-2014.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_V5-polII_EID_Rep1_Ikmi-et-al-2014.pileup_signal.bw
shortLabel "V5-polII_EID_Rep1_Ikmi-et-al-2014"
parent chips-bw
color 30,100,0
type bigWig
subGroups labExpId=V5-polII_EID_Rep1_Ikmi-et-al-2014

track chip_Yki_WID_Rep1_Oh-et-al-2013_SRR504957.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_Yki_WID_Rep1_Oh-et-al-2013_SRR504957.pileup_signal.bw
shortLabel "Yki_WID_Rep1_Oh-et-al-2013_SRR504957"
parent chips-bw
color 0,0,255
type bigWig
subGroups labExpId=Yki_WID_Rep1_Oh-et-al-2013_SRR504957

track chip_mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708.pileup_signal.bw
shortLabel "mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708"
parent chips-bw
color 255,243,24
type bigWig
subGroups labExpId=mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708

track chip_mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709.pileup_signal.bw
shortLabel "mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709"
parent chips-bw
color 255,243,24
type bigWig
subGroups labExpId=mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709

track chip_sd_EID_Rep1_Ikmi-et-al-2014.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_sd_EID_Rep1_Ikmi-et-al-2014.pileup_signal.bw
shortLabel "sd_EID_Rep1_Ikmi-et-al-2014"
parent chips-bw
color 30,100,0
type bigWig
subGroups labExpId=sd_EID_Rep1_Ikmi-et-al-2014

track chip_yki_EID_Rep1_Ikmi-et-al-2014.pileup_signal.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/UCSC_tracks/chips/chip_yki_EID_Rep1_Ikmi-et-al-2014.pileup_signal.bw
shortLabel "yki_EID_Rep1_Ikmi-et-al-2014"
parent chips-bw
color 30,100,0
type bigWig
subGroups labExpId=yki_EID_Rep1_Ikmi-et-al-2014







# BED

track chips-bed
dragAndDrop subTracks
allButtonPair on
compositeTrack on
shortLabel chips-bed
longLabel chips-bed
parent ChIPs-TFs
type bigBed 3
itemRgb on
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0

track H3K27Ac_Deplacke_WID_SRR1525221_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K27Ac_Deplacke_WID_SRR1525221_peaks.bb
shortLabel "H3K27Ac_Deplacke_WID_SRR1525221"
parent chips-bed
type bigBed 3
itemRgb on

track H3K27ac_EID_R1_SRR927435_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K27ac_EID_R1_SRR927435_peaks.bb
shortLabel "H3K27ac_EID_R1_SRR927435"
parent chips-bed
type bigBed 3
itemRgb on

track H3K27ac_WID_R1_SRR927433_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K27ac_WID_R1_SRR927433_peaks.bb
shortLabel "H3K27ac_WID_R1_SRR927433"
parent chips-bed
type bigBed 3
itemRgb on

track H3K27m3_Deplacke_WID_SRR1525220_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K27m3_Deplacke_WID_SRR1525220_peaks.bb
shortLabel "H3K27m3_Deplacke_WID_SRR1525220"
parent chips-bed
type bigBed 3
itemRgb on

track H3K27me3_ChIPSeq_WID_SRR065626_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K27me3_ChIPSeq_WID_SRR065626_peaks.bb
shortLabel "H3K27me3_ChIPSeq_WID_SRR065626"
parent chips-bed
type bigBed 3
itemRgb on

track H3K36me3_ChIPSeq_WID_SRR065627_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K36me3_ChIPSeq_WID_SRR065627_peaks.bb
shortLabel "H3K36me3_ChIPSeq_WID_SRR065627"
parent chips-bed
type bigBed 3
itemRgb on

track H3K4m1_Deplacke_WID_SRR1525218_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K4m1_Deplacke_WID_SRR1525218_peaks.bb
shortLabel "H3K4m1_Deplacke_WID_SRR1525218"
parent chips-bed
type bigBed 3
itemRgb on

track H3K4m2-3_Deplacke_WID_SRR1525219_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K4m2-3_Deplacke_WID_SRR1525219_peaks.bb
shortLabel "H3K4m2-3_Deplacke_WID_SRR1525219"
parent chips-bed
type bigBed 3
itemRgb on

track H3K4me1_EID_R1_SRR927434_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K4me1_EID_R1_SRR927434_peaks.bb
shortLabel "H3K4me1_EID_R1_SRR927434"
parent chips-bed
type bigBed 3
itemRgb on

track H3K4me1_WID_R1_SRR927432_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K4me1_WID_R1_SRR927432_peaks.bb
shortLabel "H3K4me1_WID_R1_SRR927432"
parent chips-bed
type bigBed 3
itemRgb on

track H3K4me3_ChIPSeq_WID_SRR065625_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K4me3_ChIPSeq_WID_SRR065625_peaks.bb
shortLabel "H3K4me3_ChIPSeq_WID_SRR065625"
parent chips-bed
type bigBed 3
itemRgb on

track H3K4me3_EYE_ChIPSeq_SRR646468_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K4me3_EYE_ChIPSeq_SRR646468_peaks.bb
shortLabel "H3K4me3_EYE_ChIPSeq_SRR646468"
parent chips-bed
type bigBed 3
itemRgb on

track H3K79m1-2-3_Deplacke_WID_SRR1525222_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K79m1-2-3_Deplacke_WID_SRR1525222_peaks.bb
shortLabel "H3K79m1-2-3_Deplacke_WID_SRR1525222"
parent chips-bed
type bigBed 3
itemRgb on

track H3K9ac_WING_ChIPSeq_SRR1220295_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3K9ac_WING_ChIPSeq_SRR1220295_peaks.bb
shortLabel "H3K9ac_WING_ChIPSeq_SRR1220295"
parent chips-bed
type bigBed 3
itemRgb on

track H3_WING_ChIPSeq_R1_SRR646464_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3_WING_ChIPSeq_R1_SRR646464_peaks.bb
shortLabel "H3_WING_ChIPSeq_R1_SRR646464"
parent chips-bed
type bigBed 3
itemRgb on

track H3_WING_ChIPSeq_R2_SRR646465_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/H3_WING_ChIPSeq_R2_SRR646465_peaks.bb
shortLabel "H3_WING_ChIPSeq_R2_SRR646465"
parent chips-bed
type bigBed 3
itemRgb on

track Pol2Ser2P_ChIPSeq_WID_SRR065628_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/Pol2Ser2P_ChIPSeq_WID_SRR065628_peaks.bb
shortLabel "Pol2Ser2P_ChIPSeq_WID_SRR065628"
parent chips-bed
type bigBed 3
itemRgb on

track Pol2Ser5P_ChIPSeq_WID_SRR065629_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/Pol2Ser5P_ChIPSeq_WID_SRR065629_peaks.bb
shortLabel "Pol2Ser5P_ChIPSeq_WID_SRR065629"
parent chips-bed
type bigBed 3
itemRgb on

track RNApolII_Deplacke_WID_SRR1525223_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/RNApolII_Deplacke_WID_SRR1525223_peaks.bb
shortLabel "RNApolII_Deplacke_WID_SRR1525223"
parent chips-bed
type bigBed 3
itemRgb on

track chip_ASH2_WID_Rep1_Perez-et-al-2011_SRR065624_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_ASH2_WID_Rep1_Perez-et-al-2011_SRR065624_peaks.bb
shortLabel "ASH2_WID_Rep1_Perez-et-al-2011_SRR065624"
parent chips-bed
type bigBed 3
itemRgb on

track chip_BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742_peaks.bb
shortLabel "BEAF-32_WID_Rep1_Gurudatta-et-al-2012_SRR447742"
parent chips-bed
type bigBed 3
itemRgb on

track chip_BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743_peaks.bb
shortLabel "BEAF-32_WID_Rep2_Gurudatta-et-al-2012_SRR447743"
parent chips-bed
type bigBed 3
itemRgb on

track chip_BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744_peaks.bb
shortLabel "BEAF-32_WID_Rep3_Gurudatta-et-al-2012_SRR447744"
parent chips-bed
type bigBed 3
itemRgb on

track chip_BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745_peaks.bb
shortLabel "BEAF-32_WID_Rep4_Gurudatta-et-al-2012_SRR447745"
parent chips-bed
type bigBed 3
itemRgb on

track chip_Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652_peaks.bb
shortLabel "Brinker_WID_Rep1_Doumpas-et-al-2013_SRR572652"
parent chips-bed
type bigBed 3
itemRgb on

track chip_CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323_peaks.bb
shortLabel "CBP-L3_WID_Rep1_Negre-et-al-2011_SRR030323"
parent chips-bed
type bigBed 3
itemRgb on

track chip_Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653_peaks.bb
shortLabel "Cabut_WID_Rep1_Ruiz-Romero-et-al-2015_SRR572653"
parent chips-bed
type bigBed 3
itemRgb on

track chip_GAF_WID_Rep1_Oh-et-al-2013_SRR504955_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_GAF_WID_Rep1_Oh-et-al-2013_SRR504955_peaks.bb
shortLabel "GAF_WID_Rep1_Oh-et-al-2013_SRR504955"
parent chips-bed
type bigBed 3
itemRgb on

track chip_GAF_WID_Rep2_Oh-et-al-2013_SRR504956_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_GAF_WID_Rep2_Oh-et-al-2013_SRR504956_peaks.bb
shortLabel "GAF_WID_Rep2_Oh-et-al-2013_SRR504956"
parent chips-bed
type bigBed 3
itemRgb on

track chip_K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975_peaks.bb
shortLabel "K27Ac_EID_Rep1_Cavalli-et-al-2016_SRR2672975"
parent chips-bed
type bigBed 3
itemRgb on

track chip_K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976_peaks.bb
shortLabel "K27Ac_EID_Rep2_Cavalli-et-al-2016_SRR2672976"
parent chips-bed
type bigBed 3
itemRgb on

track chip_K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977_peaks.bb
shortLabel "K27me3_EID_Rep1_Cavalli-et-al-2016_SRR2672977"
parent chips-bed
type bigBed 3
itemRgb on

track chip_K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978_peaks.bb
shortLabel "K27me3_EID_Rep2_Cavalli-et-al-2016_SRR2672978"
parent chips-bed
type bigBed 3
itemRgb on

track chip_K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985_peaks.bb
shortLabel "K27me3_WID_Rep1_Cavalli-et-al-2016_SRR2672985"
parent chips-bed
type bigBed 3
itemRgb on

track chip_K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986_peaks.bb
shortLabel "K27me3_WID_Rep2_Cavalli-et-al-2016_SRR2672986"
parent chips-bed
type bigBed 3
itemRgb on

track chip_Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811_peaks.bb
shortLabel "Notch-GFP-W3L_WID_Rep1_Karpen_modENCODE_SRR1198811"
parent chips-bed
type bigBed 3
itemRgb on

track chip_Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812_peaks.bb
shortLabel "Notch-GFP-W3L_WID_Rep2_Karpen_modENCODE_SRR1198812"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979_peaks.bb
shortLabel "PC_EID_Rep1_Cavalli-et-al-2016_SRR2672979"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980_peaks.bb
shortLabel "PC_EID_Rep2_Cavalli-et-al-2016_SRR2672980"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987_peaks.bb
shortLabel "PC_WID_Rep1_Cavalli-et-al-2016_SRR2672987"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988_peaks.bb
shortLabel "PC_WID_Rep2_Cavalli-et-al-2016_SRR2672988"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981_peaks.bb
shortLabel "PH_EID_Rep1_Cavalli-et-al-2016_SRR2672981"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982_peaks.bb
shortLabel "PH_EID_Rep2_Cavalli-et-al-2016_SRR2672982"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989_peaks.bb
shortLabel "PH_WID_Rep1_Cavalli-et-al-2016_SRR2672989"
parent chips-bed
type bigBed 3
itemRgb on

track chip_PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990_peaks.bb
shortLabel "PH_WID_Rep2_Cavalli-et-al-2016_SRR2672990"
parent chips-bed
type bigBed 3
itemRgb on

track chip_RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108_peaks.bb
shortLabel "RPD3-Q3451-L3-Nuclei_WID_Rep1_Karpen_modENCODE_SRR870108"
parent chips-bed
type bigBed 3
itemRgb on

track chip_RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109_peaks.bb
shortLabel "RPD3-Q3451-L3-Nuclei_WID_Rep2_Karpen_modENCODE_SRR870109"
parent chips-bed
type bigBed 3
itemRgb on

track chip_V5-polII_EID_Rep1_Ikmi-et-al-2014_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_V5-polII_EID_Rep1_Ikmi-et-al-2014_peaks.bb
shortLabel "V5-polII_EID_Rep1_Ikmi-et-al-2014"
parent chips-bed
type bigBed 3
itemRgb on

track chip_Yki_WID_Rep1_Oh-et-al-2013_SRR504957_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_Yki_WID_Rep1_Oh-et-al-2013_SRR504957_peaks.bb
shortLabel "Yki_WID_Rep1_Oh-et-al-2013_SRR504957"
parent chips-bed
type bigBed 3
itemRgb on

track chip_mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708_peaks.bb
shortLabel "mod-mdg4-W3L_WID_Rep1_Karpen_modENCODE_SRR1198708"
parent chips-bed
type bigBed 3
itemRgb on

track chip_mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709_peaks.bb
shortLabel "mod-mdg4-W3L_WID_Rep2_Karpen_modENCODE_SRR1198709"
parent chips-bed
type bigBed 3
itemRgb on

track chip_sd_EID_Rep1_Ikmi-et-al-2014_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_sd_EID_Rep1_Ikmi-et-al-2014_peaks.bb
shortLabel "sd_EID_Rep1_Ikmi-et-al-2014"
parent chips-bed
type bigBed 3
itemRgb on

track chip_yki_EID_Rep1_Ikmi-et-al-2014_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/chip_yki_EID_Rep1_Ikmi-et-al-2014_peaks.bb
shortLabel "yki_EID_Rep1_Ikmi-et-al-2014"
parent chips-bed
type bigBed 3
itemRgb on

track dm6_janeliaTiles.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/dm6_janeliaTiles.bb
shortLabel "dm6_janeliaTiles.bb"
parent chips-bed
type bigBed 3
itemRgb on

track dm6_tiles.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_tracks/chips/dm6_tiles.bb
shortLabel "dm6_tiles.bb"
parent chips-bed
type bigBed 3
itemRgb on






# FAIRESeq

track FAIRESeq.bw
dragAndDrop subTracks
allButtonPair on
compositeTrack on
shortLabel FAIRESeq.bw
longLabel FAIRESeq.bw
parent ChIPs-TFs
type bigWig
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 1

track dm6_GSM1261348_eye-antennal_disc_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM1261348_eye-antennal_disc_FAIRE_POOL.bw
shortLabel "eye-antennal_disc"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM1261349_larval_cns_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM1261349_larval_cns_FAIRE_POOL.bw
shortLabel "larval_cns"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948712_e2-4hr_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948712_e2-4hr_FAIRE_POOL.bw
shortLabel "e2-4hr_FAIRE"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948713_e6-8hr_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948713_e6-8hr_FAIRE_POOL.bw
shortLabel "e6-8hr_FAIRE"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948714_e16-18hr_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948714_e16-18hr_FAIRE_POOL.bw
shortLabel "e16-18hr_FAIRE"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948715_T3leg_disc_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948715_T3leg_disc_FAIRE_POOL.bw
shortLabel "T3leg_disc"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948716_haltere_disc_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948716_haltere_disc_FAIRE_POOL.bw
shortLabel "haltere_disc"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948717_wing_disc_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948717_wing_disc_FAIRE_POOL.bw
shortLabel "wing_disc"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948718_pharate_T3leg_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948718_pharate_T3leg_FAIRE_POOL.bw
shortLabel "pharate_T3leg"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948719_pharate_haltere_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948719_pharate_haltere_FAIRE_POOL.bw
shortLabel "pharate_haltere"
parent FAIRESeq.bw
color 175,175,175
type bigWig

track dm6_GSM948720_pharate_wing_FAIRE_POOL.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/dm6_GSM948720_pharate_wing_FAIRE_POOL.bw
shortLabel "pharate_wing"
parent FAIRESeq.bw
color 175,175,175
type bigWig



# FAIRESeq peaks

track FAIRESeq
dragAndDrop subTracks
allButtonPair on
compositeTrack on
shortLabel FAIRESeq
longLabel FAIRESeq
parent ChIPs-TFs
type bigBed 5
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0

track score.dm6_GSM1261348_eye-antennal_disc_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM1261348_eye-antennal_disc_FAIRE_peaks.bb
shortLabel "eye-antennal_disc"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM1261349_larval_cns_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM1261349_larval_cns_FAIRE_peaks.bb
shortLabel "larval_cns"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948712_e2-4hr_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948712_e2-4hr_FAIRE_peaks.bb
shortLabel "e2-4hr_FAIRE"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948713_e6-8hr_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948713_e6-8hr_FAIRE_peaks.bb
shortLabel "e6-8hr_FAIRE"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948714_e16-18hr_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948714_e16-18hr_FAIRE_peaks.bb
shortLabel "e16-18hr_FAIRE"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948715_T3leg_disc_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948715_T3leg_disc_FAIRE_peaks.bb
shortLabel "T3leg_disc"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948716_haltere_disc_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948716_haltere_disc_FAIRE_peaks.bb
shortLabel "haltere_disc"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948717_wing_disc_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948717_wing_disc_FAIRE_peaks.bb
shortLabel "wing_disc"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948718_pharate_T3leg_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948718_pharate_T3leg_FAIRE_peaks.bb
shortLabel "pharate_T3leg"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948719_pharate_haltere_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948719_pharate_haltere_FAIRE_peaks.bb
shortLabel "pharate_haltere"
parent FAIRESeq
type bigBed 5
color 175,175,175

track score.dm6_GSM948720_pharate_wing_FAIRE_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/FAIRESeq/score.dm6_GSM948720_pharate_wing_FAIRE_peaks.bb
shortLabel "pharate_wing"
parent FAIRESeq
type bigBed 5
color 175,175,175



# STARRSeq

track STARRSeq
dragAndDrop subTracks
allButtonPair on
compositeTrack on
shortLabel STARRSeq
longLabel STARRSeq
parent ChIPs-TFs
type bigBed 3
itemRgb on
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0

track dm3ToDm6_GSM1000400_S2_STARRseq_rep1_500bp-peaks_dm3ToDm6_GSM1000401_S2_STARRseq_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1000400_S2_STARRseq_rep1_500bp-peaks_dm3ToDm6_GSM1000401_S2_STARRseq_rep2_500bp-peaks_merged.bb
shortLabel "S2_STARRseq_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1000402_OSC_STARRseq_rep1_500bp-peaks_dm3ToDm6_GSM1000403_OSC_STARRseq_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1000402_OSC_STARRseq_rep1_500bp-peaks_dm3ToDm6_GSM1000403_OSC_STARRseq_rep2_500bp-peaks_merged.bb
shortLabel "OSC_STARRseq_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1000406_S2_DHSseq_rep1_peaks_dm3ToDm6_GSM1000407_S2_DHSseq_rep2_peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1000406_S2_DHSseq_rep1_peaks_dm3ToDm6_GSM1000407_S2_DHSseq_rep2_peaks_merged.bb
shortLabel "S2_DHSseq_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1000409_OSC_DHSseq_rep1_peaks_dm3ToDm6_GSM1000410_OSC_DHSseq_rep2_peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1000409_OSC_DHSseq_rep1_peaks_dm3ToDm6_GSM1000410_OSC_DHSseq_rep2_peaks_merged.bb
shortLabel "OSC_DHSseq_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1173346_cDNA_Dana_rep1_500bp-peaks_dm3ToDm6_GSM1173347_cDNA_Dana_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1173346_cDNA_Dana_rep1_500bp-peaks_dm3ToDm6_GSM1173347_cDNA_Dana_rep2_500bp-peaks_merged.bb
shortLabel "cDNA_Dana_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1173348_cDNA_Dpse_rep1_500bp-peaks_dm3ToDm6_GSM1173349_cDNA_Dpse_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1173348_cDNA_Dpse_rep1_500bp-peaks_dm3ToDm6_GSM1173349_cDNA_Dpse_rep2_500bp-peaks_merged.bb
shortLabel "cDNA_Dpse_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1173350_cDNA_Dwil_rep1_500bp-peaks_dm3ToDm6_GSM1173351_cDNA_Dwil_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1173350_cDNA_Dwil_rep1_500bp-peaks_dm3ToDm6_GSM1173351_cDNA_Dwil_rep2_500bp-peaks_merged.bb
shortLabel "cDNA_Dwil_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1173352_cDNA_Dyak_rep1_500bp-peaks_dm3ToDm6_GSM1173353_cDNA_Dyak_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1173352_cDNA_Dyak_rep1_500bp-peaks_dm3ToDm6_GSM1173353_cDNA_Dyak_rep2_500bp-peaks_merged.bb
shortLabel "cDNA_Dyak_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1323909_cDNA_Dana_OSC_rep1_500bp-peaks_dm3ToDm6_GSM1323910_cDNA_Dana_OSC_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1323909_cDNA_Dana_OSC_rep1_500bp-peaks_dm3ToDm6_GSM1323910_cDNA_Dana_OSC_rep2_500bp-peaks_merged.bb
shortLabel "cDNA_Dana_OSC_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on

track dm3ToDm6_GSM1323911_cDNA_Dyak_OSC_rep1_500bp-peaks_dm3ToDm6_GSM1323912_cDNA_Dyak_OSC_rep2_500bp-peaks_merged.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/STARRSeq/dm3ToDm6_GSM1323911_cDNA_Dyak_OSC_rep1_500bp-peaks_dm3ToDm6_GSM1323912_cDNA_Dyak_OSC_rep2_500bp-peaks_merged.bb
shortLabel "cDNA_Dyak_OSC_rep1_2"
parent STARRSeq
type bigBed 3
itemRgb on





track chromHMM_A-B-compartments
dragAndDrop subTracks
compositeTrack on
shortLabel chromHMM_A-B-compartments
longLabel chromHMM_A-B-compartments
parent ChIPs-TFs
type bigBed 9
itemRgb on
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
_L3_control=_L3_control \
0h=0h \
15h=15h \
25h=25h;
subGroup2 sampleType sampleType \
_L3_control=_L3_control \
control=control \
regeneration=regeneration;
sortOrder time=+ sampleType=+
dimensions dimX=time dimY=sampleType

track H00096C_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H00096C_4_dense_color.bb
shortLabel "_L3_control,_L3_control,H00096C_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=_L3_control sampleType=_L3_control

track H16H00C_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H00C_4_dense_color.bb
shortLabel "0h,control,H16H00C_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=0h sampleType=control

track H16H00S_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H00S_4_dense_color.bb
shortLabel "0h,regeneration,H16H00S_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=0h sampleType=regeneration

track H16H15C_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H15C_4_dense_color.bb
shortLabel "15h,control,H16H15C_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=15h sampleType=control

track H16H15S_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H15S_4_dense_color.bb
shortLabel "15h,regeneration,H16H15S_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=15h sampleType=regeneration

track H16H25C_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H25C_4_dense_color.bb
shortLabel "25h,control,H16H25C_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=25h sampleType=control

track H16H25S_4_dense_color.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H25S_4_dense_color.bb
shortLabel "25h,regeneration,H16H25S_chromHMM"
parent chromHMM_A-B-compartments
type bigBed 9
subGroups time=25h sampleType=regeneration



track chromHMM_A-B_short
dragAndDrop subTracks
compositeTrack on
shortLabel chromHMM_A-B_short
longLabel chromHMM_A-B_short
parent ChIPs-TFs
type bigBed 9
itemRgb on
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
subGroup1 time time \
25h=25h \
15h=15h \
_L3_control=_L3_control \
0h=0h;
subGroup2 sampleType sampleType \
control=control \
_L3_control=_L3_control \
regeneration=regeneration;
sortOrder time=+ sampleType=+
dimensions dimX=time dimY=sampleType

track H00096C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H00096C_A-B_dense.bb
shortLabel "_L3_control,_L3_control,H00096C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=_L3_control sampleType=_L3_control

track H16H00C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H00C_A-B_dense.bb
shortLabel "0h,control,H16H00C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=0h sampleType=control

track H16H00S_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H00S_A-B_dense.bb
shortLabel "0h,regeneration,H16H00S_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=0h sampleType=regeneration

track H16H15C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H15C_A-B_dense.bb
shortLabel "15h,control,H16H15C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=15h sampleType=control

track H16H15S_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H15S_A-B_dense.bb
shortLabel "15h,regeneration,H16H15S_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=15h sampleType=regeneration

track H16H25C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H25C_A-B_dense.bb
shortLabel "25h,control,H16H25C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=25h sampleType=control

track H16H25S_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/H16H25S_A-B_dense.bb
shortLabel "25h,regeneration,H16H25S_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=25h sampleType=regeneration

track active_H00096C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H00096C_A-B_dense.bb
shortLabel "_L3_control,_L3_control,active_H00096C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=_L3_control sampleType=_L3_control

track active_H16H00C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H16H00C_A-B_dense.bb
shortLabel "0h,control,active_H16H00C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=0h sampleType=control

track active_H16H00S_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H16H00S_A-B_dense.bb
shortLabel "0h,regeneration,active_H16H00S_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=0h sampleType=regeneration

track active_H16H15C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H16H15C_A-B_dense.bb
shortLabel "15h,control,active_H16H15C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=15h sampleType=control

track active_H16H15S_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H16H15S_A-B_dense.bb
shortLabel "15h,regeneration,active_H16H15S_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=15h sampleType=regeneration

track active_H16H25C_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H16H25C_A-B_dense.bb
shortLabel "25h,control,active_H16H25C_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=25h sampleType=control

track active_H16H25S_A-B_dense.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/chromHMM/active_H16H25S_A-B_dense.bb
shortLabel "25h,regeneration,active_H16H25S_A-B_compartments"
parent chromHMM_A-B_short
type bigBed 9
itemRgb on
subGroups time=25h sampleType=regeneration










# # Overlay RNASeq
# track 0h
# shortLabel 0h
# longLabel 0h
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track 11h_of_cell_death
# shortLabel 11h_of_cell_death
# longLabel 11h_of_cell_death
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track 15h
# shortLabel 15h
# longLabel 15h
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track 25h
# shortLabel 25h
# longLabel 25h
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track _L3_control
# shortLabel _L3_control
# longLabel _L3_control
# container multiWig
# aggregate transparentOverlay
# showSubtrackColorOnUi on
# type bigWig 0 1000
# viewLimits 0:80
# autoScale on
# maxHeightPixels 30
# visibility 0
# 
# track H16H15C1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H15C1.UniqueMultiple.raw.bw
# shortLabel 15h,control,H16H15C1,MultipleRawSignal
# parent 15h
# color 0,178,31
# type bigWig
# 
# track H16H00C1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H00C1.UniqueMultiple.raw.bw
# shortLabel 0h,control,H16H00C1,MultipleRawSignal
# parent 0h
# color 0,178,31
# type bigWig
# 
# track H16H15S1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H15S1.UniqueMultiple.raw.bw
# shortLabel 15h,regeneration,H16H15S1,MultipleRawSignal
# parent 15h
# color 255,138,31
# type bigWig
# 
# track H11H00C1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H11H00C1.UniqueMultiple.raw.bw
# shortLabel 11h_of_cell_death,control,H11H00C1,MultipleRawSignal
# parent 11h_of_cell_death
# color 0,178,31
# type bigWig
# 
# track H16H00S1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H00S1.UniqueMultiple.raw.bw
# shortLabel 0h,regeneration,H16H00S1,MultipleRawSignal
# parent 0h
# color 255,138,31
# type bigWig
# 
# track H00096C1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H00096C1.UniqueMultiple.raw.bw
# shortLabel _L3_control,_L3_control,H00096C1,MultipleRawSignal
# parent _L3_control
# color 0,51,0
# type bigWig
# 
# track H11H00S1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H11H00S1.UniqueMultiple.raw.bw
# shortLabel 11h_of_cell_death,regeneration,H11H00S1,MultipleRawSignal
# parent 11h_of_cell_death
# color 255,138,31
# type bigWig
# 
# track H16H25S1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H25S1.UniqueMultiple.raw.bw
# shortLabel 25h,regeneration,H16H25S1,MultipleRawSignal
# parent 25h
# color 255,138,31
# type bigWig
# 
# track H16H25C1.UniqueMultiple.raw.bw
# bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/RNASeq/H16H25C1.UniqueMultiple.raw.bw
# shortLabel 25h,control,H16H25C1,MultipleRawSignal
# parent 25h
# color 0,178,31
# type bigWig

############################################################################################################################
############################################################################################################################
################### ChIPSeq ################################################################################################
############################################################################################################################


# super track ChIPSeq
track ChIPSeq
superTrack on
shortLabel ChIPSeq
longLabel ChIPSeq
visibility 0


track ChIPSeq:bed
dragAndDrop subTracks
compositeTrack on
shortLabel ChIPSeq:bed
longLabel ChIPSeq:bed
type bigBed 3
itemRgb on
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
parent ChIPSeq
subGroup1 mark mark \
H3K27ac=H3K27ac \
RNApol=RNApol \
H3K4me1=H3K4me1;
subGroup2 sampleType sampleType \
control=control \
regeneration=regeneration;
sortOrder mark=+ sampleType=+
dimensions dimX=mark dimY=sampleType

track NIH3K27acCX2_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq/NIH3K27acCX2_peaks.bb
shortLabel "H3K27ac,control,NIH3K27acCX2"
parent ChIPSeq:bed
color 0,178,31
type bigBed 3
itemRgb on
subGroups mark=H3K27ac sampleType=control

track NIH3K27acSX1_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq/NIH3K27acSX1_peaks.bb
shortLabel "H3K27ac,regeneration,NIH3K27acSX1"
parent ChIPSeq:bed
color 255,138,31
type bigBed 3
itemRgb on
subGroups mark=H3K27ac sampleType=regeneration

track NIH3K4m1SX1_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq/NIH3K4m1SX1_peaks.bb
shortLabel "H3K4me1,regeneration,NIH3K4m1SX1"
parent ChIPSeq:bed
color 255,138,31
type bigBed 3
itemRgb on
subGroups mark=H3K4me1 sampleType=regeneration

track NIH3K4me1CX2_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq/NIH3K4me1CX2_peaks.bb
shortLabel "H3K4me1,control,NIH3K4me1CX2"
parent ChIPSeq:bed
color 0,178,31
type bigBed 3
itemRgb on
subGroups mark=H3K4me1 sampleType=control

track NIRNApolCX2_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq/NIRNApolCX2_peaks.bb
shortLabel "RNApol,control,NIRNApolCX2"
parent ChIPSeq:bed
color 0,178,31
type bigBed 3
itemRgb on
subGroups mark=RNApol sampleType=control

track NIRNApolSX1_peaks.bb
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq/NIRNApolSX1_peaks.bb
shortLabel "RNApol,regeneration,NIRNApolSX1"
parent ChIPSeq:bed
color 255,138,31
type bigBed 3
itemRgb on
subGroups mark=RNApol sampleType=regeneration




track H3K27ac
shortLabel H3K27ac
longLabel H3K27ac
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 1000
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
parent ChIPSeq

track H3K4me1
shortLabel H3K4me1
longLabel H3K4me1
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 1000
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
parent ChIPSeq

track RNApolII
shortLabel RNApolII
longLabel RNApolII
container multiWig
aggregate transparentOverlay
showSubtrackColorOnUi on
type bigWig 0 1000
viewLimits 0:80
autoScale on
maxHeightPixels 30
visibility 0
parent ChIPSeq

track QN-NIH3K27acCX2.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq-QN/QN-NIH3K27acCX2.bw
shortLabel H3K27ac,control,NIH3K27acCX2,QN-pileupSignal
parent H3K27ac
color 0,178,31
type bigWig

track QN-NIH3K27acSX1.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq-QN/QN-NIH3K27acSX1.bw
shortLabel H3K27ac,regeneration,NIH3K27acSX1,QN-pileupSignal
parent H3K27ac
color 255,138,31
type bigWig

track QN-NIH3K4m1SX1.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq-QN/QN-NIH3K4m1SX1.bw
shortLabel H3K4me1,regeneration,NIH3K4m1SX1,QN-pileupSignal
parent H3K4me1
color 255,138,31
type bigWig

track QN-NIH3K4me1CX2.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq-QN/QN-NIH3K4me1CX2.bw
shortLabel H3K4me1,control,NIH3K4me1CX2,QN-pileupSignal
parent H3K4me1
color 0,178,31
type bigWig

track QN-NIRNApolCX2.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq-QN/QN-NIRNApolCX2.bw
shortLabel RNApolII,control,NIRNApolCX2,QN-pileupSignal
parent RNApolII
color 0,178,31
type bigWig

track QN-NIRNApolSX1.bw
bigDataUrl http://public_docs.crg.es/rguigo/Data/cklein/dmel/regeneration/UCSC_hub/ChIPSeq-QN/QN-NIRNApolSX1.bw
shortLabel RNApolII,regeneration,NIRNApolSX1,QN-pileupSignal
parent RNApolII
color 255,138,31
type bigWig


##########################