#***** Jun 23rd, 2015 ***** idxGF="/no_backup/rg/projects/ERC/fly/grape.pipeline/gem.flux/erc_rna_dashboard.gemflux.txt" idxSR="/no_backup/rg/projects/ERC/fly/grape.pipeline/star.rsem/erc_rna_dashboard.starrsem.txt" # gem flux for f in $(grep "labExpId=WL3.1;" $idxGF | grep "type=bigwig" | grep -v "bp.pipeline" | cut -f1) ; do ln -s $f ; done # star rsem for f in $(grep "labExpId=WL3.1;" $idxSR | grep "type=bigwig" | grep -v "bp.pipeline" | grep "view=Multiple" | cut -f1); do ln -s $f; done #****** jun 25th, 2015 ***** # Could not access the data because files are in the no_backup folder # save them in the no_backup_isis for f in $(ls /no_backup_isis/rg/projects/ERC/fly/); do ln -s /no_backup_isis/rg/projects/ERC/fly/$f; done for f in $(ls /users/rg/projects/ERC/fly/UCSC_tracks/benchmark/); do ln -s /users/rg/projects/ERC/fly/UCSC_tracks/benchmark/$f; done