[M::mm_idx_gen::31.867*1.99] collected minimizers
[M::mm_idx_gen::41.622*2.82] sorted minimizers
[M::main::41.622*2.82] loaded/built the index for 993 target sequence(s)
[M::mm_mapopt_update::42.002*2.81] mid_occ = 2799
[M::mm_idx_stat] kmer size: 13; skip: 5; is_hpc: 0; #seq: 993
[M::mm_idx_stat::42.184*2.80] distinct minimizers: 19647024 (16.73% are singletons); average occurrences: 24.128; average spacing: 2.897
[M::worker_pipeline::48.251*3.17] mapped 4000 sequences
[M::worker_pipeline::54.900*3.47] mapped 4000 sequences
[M::worker_pipeline::61.080*3.70] mapped 4000 sequences
[M::worker_pipeline::67.639*3.89] mapped 4000 sequences
[M::worker_pipeline::74.166*4.05] mapped 4000 sequences
[M::worker_pipeline::81.057*4.20] mapped 4000 sequences
[M::worker_pipeline::88.308*4.32] mapped 4000 sequences
[M::worker_pipeline::94.673*4.41] mapped 4000 sequences
[M::worker_pipeline::101.231*4.50] mapped 4000 sequences
[M::worker_pipeline::107.886*4.57] mapped 4000 sequences
[M::worker_pipeline::115.347*4.64] mapped 4000 sequences
[M::worker_pipeline::121.799*4.70] mapped 4000 sequences
[M::worker_pipeline::127.812*4.74] mapped 4000 sequences
[M::worker_pipeline::134.562*4.79] mapped 4000 sequences
[M::worker_pipeline::141.128*4.83] mapped 4000 sequences
[M::worker_pipeline::149.704*4.83] mapped 4000 sequences
[M::worker_pipeline::157.275*4.86] mapped 4000 sequences
[M::worker_pipeline::163.853*4.90] mapped 4000 sequences
[M::worker_pipeline::170.431*4.92] mapped 4000 sequences
[M::worker_pipeline::177.097*4.95] mapped 4000 sequences
[M::worker_pipeline::183.152*4.98] mapped 4000 sequences
[M::worker_pipeline::189.576*5.01] mapped 4000 sequences
[M::worker_pipeline::196.119*5.02] mapped 4000 sequences
[M::worker_pipeline::202.880*5.05] mapped 4000 sequences
[M::worker_pipeline::209.801*5.07] mapped 4000 sequences
[M::worker_pipeline::216.346*5.09] mapped 4000 sequences
[M::worker_pipeline::223.133*5.11] mapped 4000 sequences
[M::worker_pipeline::229.971*5.13] mapped 4000 sequences
[M::worker_pipeline::236.792*5.14] mapped 4000 sequences
[M::worker_pipeline::243.031*5.16] mapped 4000 sequences
[M::worker_pipeline::250.181*5.17] mapped 4000 sequences
[M::worker_pipeline::256.419*5.18] mapped 4000 sequences
[M::worker_pipeline::262.596*5.19] mapped 4000 sequences
[M::worker_pipeline::269.231*5.21] mapped 4000 sequences
[M::worker_pipeline::276.135*5.22] mapped 4000 sequences
[M::worker_pipeline::282.767*5.23] mapped 4000 sequences
[M::worker_pipeline::289.213*5.24] mapped 4000 sequences
[M::worker_pipeline::295.103*5.25] mapped 4000 sequences
[M::worker_pipeline::302.311*5.26] mapped 4000 sequences
[M::worker_pipeline::309.428*5.27] mapped 4000 sequences
[M::worker_pipeline::315.689*5.28] mapped 4000 sequences
[M::worker_pipeline::322.200*5.29] mapped 4000 sequences
[M::worker_pipeline::328.796*5.30] mapped 4000 sequences
[M::worker_pipeline::334.897*5.30] mapped 4000 sequences
[M::worker_pipeline::341.104*5.31] mapped 4000 sequences
[M::worker_pipeline::347.706*5.32] mapped 4000 sequences
[M::worker_pipeline::353.890*5.33] mapped 4000 sequences
[M::worker_pipeline::360.474*5.34] mapped 4000 sequences
[M::worker_pipeline::366.586*5.34] mapped 4000 sequences
[M::worker_pipeline::373.003*5.35] mapped 4000 sequences
[M::worker_pipeline::379.457*5.36] mapped 4000 sequences
[M::worker_pipeline::386.220*5.36] mapped 4000 sequences
[M::worker_pipeline::393.081*5.36] mapped 4000 sequences
[M::worker_pipeline::399.464*5.37] mapped 4000 sequences
[M::worker_pipeline::406.282*5.37] mapped 4000 sequences
[M::worker_pipeline::412.558*5.38] mapped 4000 sequences
[M::worker_pipeline::419.431*5.38] mapped 4000 sequences
[M::worker_pipeline::426.348*5.39] mapped 4000 sequences
[M::worker_pipeline::432.821*5.40] mapped 4000 sequences
[M::worker_pipeline::439.226*5.40] mapped 4000 sequences
[M::worker_pipeline::445.966*5.41] mapped 4000 sequences
[M::worker_pipeline::452.900*5.41] mapped 4000 sequences
[M::worker_pipeline::459.497*5.41] mapped 4000 sequences
[M::worker_pipeline::466.392*5.42] mapped 4000 sequences
[M::worker_pipeline::473.072*5.42] mapped 4000 sequences
[M::worker_pipeline::479.998*5.42] mapped 4000 sequences
[M::worker_pipeline::486.735*5.43] mapped 4000 sequences
[M::worker_pipeline::493.218*5.43] mapped 4000 sequences
[M::worker_pipeline::501.480*5.43] mapped 4000 sequences
[M::worker_pipeline::508.453*5.43] mapped 4000 sequences
[M::worker_pipeline::515.037*5.44] mapped 4000 sequences
[M::worker_pipeline::521.688*5.44] mapped 4000 sequences
[M::worker_pipeline::528.476*5.44] mapped 4000 sequences
[M::worker_pipeline::535.129*5.45] mapped 4000 sequences
[M::worker_pipeline::541.521*5.45] mapped 4000 sequences
[M::worker_pipeline::548.046*5.46] mapped 4000 sequences
[M::worker_pipeline::554.831*5.46] mapped 4000 sequences
[M::worker_pipeline::561.674*5.46] mapped 4000 sequences
[M::worker_pipeline::568.280*5.46] mapped 4000 sequences
[M::worker_pipeline::575.308*5.47] mapped 4000 sequences
[M::worker_pipeline::581.997*5.47] mapped 4000 sequences
[M::worker_pipeline::588.333*5.47] mapped 4000 sequences
[M::worker_pipeline::595.377*5.47] mapped 4000 sequences
[M::worker_pipeline::601.924*5.48] mapped 4000 sequences
[M::worker_pipeline::608.644*5.48] mapped 4000 sequences
[M::worker_pipeline::615.733*5.48] mapped 4000 sequences
[M::worker_pipeline::623.150*5.48] mapped 4000 sequences
[M::worker_pipeline::629.654*5.49] mapped 4000 sequences
[M::worker_pipeline::635.853*5.49] mapped 4000 sequences
[M::worker_pipeline::642.753*5.49] mapped 4000 sequences
[M::worker_pipeline::649.583*5.49] mapped 4000 sequences
[M::worker_pipeline::656.660*5.50] mapped 4000 sequences
[M::worker_pipeline::663.456*5.50] mapped 4000 sequences
[M::worker_pipeline::670.356*5.50] mapped 4000 sequences
[M::worker_pipeline::677.677*5.50] mapped 4000 sequences
[M::worker_pipeline::684.119*5.51] mapped 4000 sequences
[M::worker_pipeline::690.746*5.51] mapped 4000 sequences
[M::worker_pipeline::697.414*5.51] mapped 4000 sequences
[M::worker_pipeline::704.129*5.51] mapped 4000 sequences
[M::worker_pipeline::710.617*5.51] mapped 4000 sequences
[M::worker_pipeline::718.637*5.51] mapped 4000 sequences
[M::worker_pipeline::725.729*5.51] mapped 4000 sequences
[M::worker_pipeline::732.333*5.51] mapped 4000 sequences
[M::worker_pipeline::738.962*5.51] mapped 4000 sequences
[M::worker_pipeline::746.354*5.52] mapped 4000 sequences
[M::worker_pipeline::753.307*5.52] mapped 4000 sequences
[M::worker_pipeline::760.699*5.52] mapped 4000 sequences
[M::worker_pipeline::767.118*5.52] mapped 4000 sequences
[M::worker_pipeline::773.574*5.52] mapped 4000 sequences
[M::worker_pipeline::780.414*5.52] mapped 4000 sequences
[M::worker_pipeline::787.064*5.52] mapped 4000 sequences
[M::worker_pipeline::793.883*5.53] mapped 4000 sequences
[M::worker_pipeline::800.784*5.53] mapped 4000 sequences
[M::worker_pipeline::807.875*5.53] mapped 4000 sequences
[M::worker_pipeline::814.183*5.53] mapped 4000 sequences
[M::worker_pipeline::820.598*5.53] mapped 4000 sequences
[M::worker_pipeline::827.804*5.53] mapped 4000 sequences
[M::worker_pipeline::834.461*5.54] mapped 4000 sequences
[M::worker_pipeline::841.150*5.54] mapped 4000 sequences
[M::worker_pipeline::847.721*5.54] mapped 4000 sequences
[M::worker_pipeline::854.857*5.54] mapped 4000 sequences
[M::worker_pipeline::861.377*5.54] mapped 4000 sequences
[M::worker_pipeline::868.176*5.54] mapped 4000 sequences
[M::worker_pipeline::874.822*5.55] mapped 4000 sequences
[M::worker_pipeline::881.458*5.55] mapped 4000 sequences
[M::worker_pipeline::888.131*5.55] mapped 4000 sequences
[M::worker_pipeline::895.043*5.55] mapped 4000 sequences
[M::worker_pipeline::901.629*5.55] mapped 4000 sequences
[M::worker_pipeline::908.317*5.55] mapped 4000 sequences
[M::worker_pipeline::915.003*5.55] mapped 4000 sequences
[M::worker_pipeline::953.798*5.41] mapped 4000 sequences
[M::worker_pipeline::960.404*5.41] mapped 4000 sequences
[M::worker_pipeline::966.736*5.41] mapped 4000 sequences
[M::worker_pipeline::973.986*5.42] mapped 4000 sequences
[M::worker_pipeline::980.849*5.42] mapped 4000 sequences
[M::worker_pipeline::986.877*5.42] mapped 4000 sequences
[M::worker_pipeline::993.925*5.42] mapped 4000 sequences
[M::worker_pipeline::1000.376*5.42] mapped 4000 sequences
[M::worker_pipeline::1007.110*5.43] mapped 4000 sequences
[M::worker_pipeline::1014.350*5.43] mapped 4000 sequences
[M::worker_pipeline::1020.967*5.43] mapped 4000 sequences
[M::worker_pipeline::1028.073*5.43] mapped 4000 sequences
[M::worker_pipeline::1034.649*5.43] mapped 4000 sequences
[M::worker_pipeline::1041.266*5.44] mapped 4000 sequences
[M::worker_pipeline::1047.926*5.44] mapped 4000 sequences
[M::worker_pipeline::1055.032*5.44] mapped 4000 sequences
[M::worker_pipeline::1061.530*5.44] mapped 4000 sequences
[M::worker_pipeline::1068.203*5.44] mapped 4000 sequences
[M::worker_pipeline::1074.824*5.44] mapped 4000 sequences
[M::worker_pipeline::1081.683*5.45] mapped 4000 sequences
[M::worker_pipeline::1088.547*5.45] mapped 4000 sequences
[M::worker_pipeline::1095.203*5.45] mapped 4000 sequences
[M::worker_pipeline::1101.886*5.45] mapped 4000 sequences
[M::worker_pipeline::1108.715*5.45] mapped 4000 sequences
[M::worker_pipeline::1115.547*5.45] mapped 4000 sequences
[M::worker_pipeline::1122.252*5.45] mapped 4000 sequences
[M::worker_pipeline::1129.467*5.46] mapped 4000 sequences
[M::worker_pipeline::1136.088*5.46] mapped 4000 sequences
[M::worker_pipeline::1143.282*5.46] mapped 4000 sequences
[M::worker_pipeline::1146.159*5.46] mapped 1590 sequences
[M::worker_pipeline::1152.793*5.46] mapped 4000 sequences
[M::worker_pipeline::1159.315*5.46] mapped 4000 sequences
[M::worker_pipeline::1165.915*5.46] mapped 4000 sequences
[M::worker_pipeline::1172.307*5.47] mapped 4000 sequences
[M::worker_pipeline::1180.103*5.46] mapped 4000 sequences
[M::worker_pipeline::1186.532*5.46] mapped 4000 sequences
[M::worker_pipeline::1193.204*5.46] mapped 4000 sequences
[M::worker_pipeline::1200.030*5.47] mapped 4000 sequences
[M::worker_pipeline::1206.272*5.47] mapped 4000 sequences
[M::worker_pipeline::1212.642*5.47] mapped 4000 sequences
[M::worker_pipeline::1218.898*5.47] mapped 4000 sequences
[M::worker_pipeline::1226.000*5.47] mapped 4000 sequences
[M::worker_pipeline::1232.444*5.47] mapped 4000 sequences
[M::worker_pipeline::1239.503*5.47] mapped 4000 sequences
[M::worker_pipeline::1246.081*5.47] mapped 4000 sequences
[M::worker_pipeline::1253.384*5.48] mapped 4000 sequences
[M::worker_pipeline::1259.822*5.48] mapped 4000 sequences
[M::worker_pipeline::1266.863*5.48] mapped 4000 sequences
[M::worker_pipeline::1273.592*5.48] mapped 4000 sequences
[M::worker_pipeline::1280.508*5.48] mapped 4000 sequences
[M::worker_pipeline::1286.763*5.48] mapped 4000 sequences
[M::worker_pipeline::1293.425*5.48] mapped 4000 sequences
[M::worker_pipeline::1300.490*5.49] mapped 4000 sequences
[M::worker_pipeline::1307.296*5.49] mapped 4000 sequences
[M::worker_pipeline::1313.781*5.49] mapped 4000 sequences
[M::worker_pipeline::1320.335*5.49] mapped 4000 sequences
[M::worker_pipeline::1326.920*5.49] mapped 4000 sequences
[M::worker_pipeline::1333.285*5.49] mapped 4000 sequences
[M::worker_pipeline::1339.871*5.49] mapped 4000 sequences
[M::worker_pipeline::1346.048*5.49] mapped 4000 sequences
[M::worker_pipeline::1352.859*5.49] mapped 4000 sequences
[M::worker_pipeline::1360.137*5.50] mapped 4000 sequences
[M::worker_pipeline::1367.224*5.50] mapped 4000 sequences
[M::worker_pipeline::1373.843*5.50] mapped 4000 sequences
[M::worker_pipeline::1380.288*5.50] mapped 4000 sequences
[M::worker_pipeline::1386.779*5.50] mapped 4000 sequences
[M::worker_pipeline::1393.511*5.50] mapped 4000 sequences
[M::worker_pipeline::1401.180*5.50] mapped 4000 sequences
[M::worker_pipeline::1408.225*5.50] mapped 4000 sequences
[M::worker_pipeline::1414.761*5.50] mapped 4000 sequences
[M::worker_pipeline::1421.855*5.51] mapped 4000 sequences
[M::worker_pipeline::1428.295*5.51] mapped 4000 sequences
[M::worker_pipeline::1434.932*5.51] mapped 4000 sequences
[M::worker_pipeline::1441.203*5.51] mapped 4000 sequences
[M::worker_pipeline::1447.967*5.51] mapped 4000 sequences
[M::worker_pipeline::1454.632*5.51] mapped 4000 sequences
[M::worker_pipeline::1461.720*5.51] mapped 4000 sequences
[M::worker_pipeline::1469.029*5.51] mapped 4000 sequences
[M::worker_pipeline::1475.330*5.51] mapped 4000 sequences
[M::worker_pipeline::1482.156*5.52] mapped 4000 sequences
[M::worker_pipeline::1488.878*5.52] mapped 4000 sequences
[M::worker_pipeline::1494.993*5.52] mapped 4000 sequences
[M::worker_pipeline::1501.805*5.52] mapped 4000 sequences
[M::worker_pipeline::1508.450*5.52] mapped 4000 sequences
[M::worker_pipeline::1515.216*5.52] mapped 4000 sequences
[M::worker_pipeline::1521.464*5.52] mapped 4000 sequences
[M::worker_pipeline::1528.472*5.52] mapped 4000 sequences
[M::worker_pipeline::1534.826*5.52] mapped 4000 sequences
[M::worker_pipeline::1541.524*5.52] mapped 4000 sequences
[M::worker_pipeline::1548.193*5.53] mapped 4000 sequences
[M::worker_pipeline::1555.277*5.53] mapped 4000 sequences
[M::worker_pipeline::1561.728*5.53] mapped 4000 sequences
[M::worker_pipeline::1568.287*5.53] mapped 4000 sequences
[M::worker_pipeline::1575.105*5.53] mapped 4000 sequences
[M::worker_pipeline::1581.753*5.53] mapped 4000 sequences
[M::worker_pipeline::1588.254*5.53] mapped 4000 sequences
[M::worker_pipeline::1594.542*5.53] mapped 4000 sequences
[M::worker_pipeline::1600.953*5.53] mapped 4000 sequences
[M::worker_pipeline::1607.024*5.53] mapped 4000 sequences
[M::worker_pipeline::1613.676*5.53] mapped 4000 sequences
[M::worker_pipeline::1620.206*5.53] mapped 4000 sequences
[M::worker_pipeline::1626.436*5.53] mapped 4000 sequences
[M::worker_pipeline::1633.055*5.53] mapped 4000 sequences
[M::worker_pipeline::1639.649*5.54] mapped 4000 sequences
[M::worker_pipeline::1646.147*5.54] mapped 4000 sequences
[M::worker_pipeline::1653.013*5.54] mapped 4000 sequences
[M::worker_pipeline::1659.554*5.54] mapped 4000 sequences
[M::worker_pipeline::1666.521*5.54] mapped 4000 sequences
[M::worker_pipeline::1673.170*5.54] mapped 4000 sequences
[M::worker_pipeline::1679.988*5.54] mapped 4000 sequences
[M::worker_pipeline::1686.674*5.54] mapped 4000 sequences
[M::worker_pipeline::1693.773*5.54] mapped 4000 sequences
[M::main] Version: 2.17-r941
[M::main] CMD: minimap2 -t6 -axsplice -k13 /no_backup_isis/enovoa/reference_fasta/zebrafish/reference/Danio_rerio.GRCz11.dna_sm.primary_assembly.fa /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch0.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch1.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch10.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch100.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch101.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch102.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch103.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch104.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch105.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch106.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch107.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch108.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch109.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch11.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch110.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch111.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch112.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch113.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch114.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch115.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch116.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch117.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep2/batch118.fast5.fastm.gz 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[M::main] Real time: 1693.933 sec; CPU: 9384.358 sec; Peak RSS: 8.880 GB