[M::mm_idx_gen::31.788*1.99] collected minimizers
[M::mm_idx_gen::41.216*2.84] sorted minimizers
[M::main::41.216*2.84] loaded/built the index for 993 target sequence(s)
[M::mm_mapopt_update::41.594*2.82] mid_occ = 2799
[M::mm_idx_stat] kmer size: 13; skip: 5; is_hpc: 0; #seq: 993
[M::mm_idx_stat::41.776*2.81] distinct minimizers: 19647024 (16.73% are singletons); average occurrences: 24.128; average spacing: 2.897
[M::worker_pipeline::48.736*3.14] mapped 4000 sequences
[M::worker_pipeline::55.673*3.45] mapped 4000 sequences
[M::worker_pipeline::61.579*3.66] mapped 4000 sequences
[M::worker_pipeline::67.624*3.85] mapped 4000 sequences
[M::worker_pipeline::73.766*4.00] mapped 4000 sequences
[M::worker_pipeline::79.858*4.13] mapped 4000 sequences
[M::worker_pipeline::86.004*4.25] mapped 4000 sequences
[M::worker_pipeline::92.045*4.34] mapped 4000 sequences
[M::worker_pipeline::98.227*4.42] mapped 4000 sequences
[M::worker_pipeline::104.097*4.50] mapped 4000 sequences
[M::worker_pipeline::110.419*4.57] mapped 4000 sequences
[M::worker_pipeline::117.133*4.63] mapped 4000 sequences
[M::worker_pipeline::123.499*4.68] mapped 4000 sequences
[M::worker_pipeline::132.772*4.68] mapped 4000 sequences
[M::worker_pipeline::138.772*4.72] mapped 4000 sequences
[M::worker_pipeline::145.205*4.76] mapped 4000 sequences
[M::worker_pipeline::151.406*4.80] mapped 4000 sequences
[M::worker_pipeline::157.494*4.84] mapped 4000 sequences
[M::worker_pipeline::163.666*4.87] mapped 4000 sequences
[M::worker_pipeline::169.963*4.90] mapped 4000 sequences
[M::worker_pipeline::176.022*4.93] mapped 4000 sequences
[M::worker_pipeline::182.490*4.96] mapped 4000 sequences
[M::worker_pipeline::188.645*4.98] mapped 4000 sequences
[M::worker_pipeline::194.600*5.00] mapped 4000 sequences
[M::worker_pipeline::200.751*5.02] mapped 4000 sequences
[M::worker_pipeline::206.716*5.04] mapped 4000 sequences
[M::worker_pipeline::212.960*5.06] mapped 4000 sequences
[M::worker_pipeline::218.995*5.08] mapped 4000 sequences
[M::worker_pipeline::225.708*5.10] mapped 4000 sequences
[M::worker_pipeline::232.119*5.11] mapped 4000 sequences
[M::worker_pipeline::238.089*5.13] mapped 4000 sequences
[M::worker_pipeline::244.391*5.14] mapped 4000 sequences
[M::worker_pipeline::250.367*5.16] mapped 4000 sequences
[M::worker_pipeline::257.000*5.17] mapped 4000 sequences
[M::worker_pipeline::263.410*5.18] mapped 4000 sequences
[M::worker_pipeline::269.712*5.19] mapped 4000 sequences
[M::worker_pipeline::276.134*5.20] mapped 4000 sequences
[M::worker_pipeline::282.473*5.21] mapped 4000 sequences
[M::worker_pipeline::288.565*5.22] mapped 4000 sequences
[M::worker_pipeline::295.092*5.23] mapped 4000 sequences
[M::worker_pipeline::301.624*5.25] mapped 4000 sequences
[M::worker_pipeline::308.438*5.25] mapped 4000 sequences
[M::worker_pipeline::314.910*5.26] mapped 4000 sequences
[M::worker_pipeline::321.293*5.27] mapped 4000 sequences
[M::worker_pipeline::327.417*5.28] mapped 4000 sequences
[M::worker_pipeline::333.435*5.29] mapped 4000 sequences
[M::worker_pipeline::339.895*5.29] mapped 4000 sequences
[M::worker_pipeline::346.265*5.30] mapped 4000 sequences
[M::worker_pipeline::352.421*5.31] mapped 4000 sequences
[M::worker_pipeline::358.337*5.32] mapped 4000 sequences
[M::worker_pipeline::364.561*5.32] mapped 4000 sequences
[M::worker_pipeline::371.330*5.33] mapped 4000 sequences
[M::worker_pipeline::377.633*5.33] mapped 4000 sequences
[M::worker_pipeline::384.011*5.34] mapped 4000 sequences
[M::worker_pipeline::390.054*5.35] mapped 4000 sequences
[M::worker_pipeline::396.314*5.35] mapped 4000 sequences
[M::worker_pipeline::402.325*5.36] mapped 4000 sequences
[M::worker_pipeline::408.922*5.36] mapped 4000 sequences
[M::worker_pipeline::415.463*5.37] mapped 4000 sequences
[M::worker_pipeline::421.516*5.37] mapped 4000 sequences
[M::worker_pipeline::427.734*5.38] mapped 4000 sequences
[M::worker_pipeline::434.435*5.38] mapped 4000 sequences
[M::worker_pipeline::440.721*5.39] mapped 4000 sequences
[M::worker_pipeline::446.679*5.39] mapped 4000 sequences
[M::worker_pipeline::452.608*5.39] mapped 4000 sequences
[M::worker_pipeline::459.333*5.40] mapped 4000 sequences
[M::worker_pipeline::465.620*5.40] mapped 4000 sequences
[M::worker_pipeline::471.659*5.41] mapped 4000 sequences
[M::worker_pipeline::478.007*5.41] mapped 4000 sequences
[M::worker_pipeline::483.855*5.41] mapped 4000 sequences
[M::worker_pipeline::490.288*5.42] mapped 4000 sequences
[M::worker_pipeline::496.641*5.42] mapped 4000 sequences
[M::worker_pipeline::502.920*5.43] mapped 4000 sequences
[M::worker_pipeline::509.306*5.43] mapped 4000 sequences
[M::worker_pipeline::515.827*5.43] mapped 4000 sequences
[M::worker_pipeline::521.880*5.44] mapped 4000 sequences
[M::worker_pipeline::528.428*5.44] mapped 4000 sequences
[M::worker_pipeline::534.801*5.44] mapped 4000 sequences
[M::worker_pipeline::540.838*5.45] mapped 4000 sequences
[M::worker_pipeline::547.194*5.45] mapped 4000 sequences
[M::worker_pipeline::553.435*5.45] mapped 4000 sequences
[M::worker_pipeline::559.653*5.46] mapped 4000 sequences
[M::worker_pipeline::565.843*5.46] mapped 4000 sequences
[M::worker_pipeline::572.550*5.46] mapped 4000 sequences
[M::worker_pipeline::578.586*5.46] mapped 4000 sequences
[M::worker_pipeline::584.888*5.47] mapped 4000 sequences
[M::worker_pipeline::591.274*5.47] mapped 4000 sequences
[M::worker_pipeline::597.880*5.47] mapped 4000 sequences
[M::worker_pipeline::603.882*5.47] mapped 4000 sequences
[M::worker_pipeline::609.998*5.48] mapped 4000 sequences
[M::worker_pipeline::616.342*5.48] mapped 4000 sequences
[M::worker_pipeline::622.808*5.48] mapped 4000 sequences
[M::worker_pipeline::629.212*5.48] mapped 4000 sequences
[M::worker_pipeline::635.504*5.49] mapped 4000 sequences
[M::worker_pipeline::642.013*5.49] mapped 4000 sequences
[M::worker_pipeline::648.601*5.49] mapped 4000 sequences
[M::worker_pipeline::654.748*5.49] mapped 4000 sequences
[M::worker_pipeline::661.262*5.50] mapped 4000 sequences
[M::worker_pipeline::667.356*5.50] mapped 4000 sequences
[M::worker_pipeline::673.409*5.50] mapped 4000 sequences
[M::worker_pipeline::679.514*5.50] mapped 4000 sequences
[M::worker_pipeline::685.923*5.50] mapped 4000 sequences
[M::worker_pipeline::692.274*5.50] mapped 4000 sequences
[M::worker_pipeline::698.661*5.51] mapped 4000 sequences
[M::worker_pipeline::704.808*5.51] mapped 4000 sequences
[M::worker_pipeline::711.453*5.51] mapped 4000 sequences
[M::worker_pipeline::717.754*5.51] mapped 4000 sequences
[M::worker_pipeline::724.207*5.51] mapped 4000 sequences
[M::worker_pipeline::730.131*5.51] mapped 4000 sequences
[M::worker_pipeline::736.366*5.52] mapped 4000 sequences
[M::worker_pipeline::742.458*5.52] mapped 4000 sequences
[M::worker_pipeline::748.458*5.52] mapped 4000 sequences
[M::worker_pipeline::754.644*5.52] mapped 4000 sequences
[M::worker_pipeline::760.947*5.52] mapped 4000 sequences
[M::worker_pipeline::767.256*5.52] mapped 4000 sequences
[M::worker_pipeline::773.250*5.53] mapped 4000 sequences
[M::worker_pipeline::779.615*5.53] mapped 4000 sequences
[M::worker_pipeline::786.443*5.53] mapped 4000 sequences
[M::worker_pipeline::792.756*5.53] mapped 4000 sequences
[M::worker_pipeline::798.490*5.53] mapped 4000 sequences
[M::worker_pipeline::804.540*5.53] mapped 4000 sequences
[M::worker_pipeline::810.912*5.53] mapped 4000 sequences
[M::worker_pipeline::817.129*5.54] mapped 4000 sequences
[M::worker_pipeline::823.218*5.54] mapped 4000 sequences
[M::worker_pipeline::829.732*5.54] mapped 4000 sequences
[M::worker_pipeline::835.853*5.54] mapped 4000 sequences
[M::worker_pipeline::841.998*5.54] mapped 4000 sequences
[M::worker_pipeline::848.488*5.54] mapped 4000 sequences
[M::worker_pipeline::855.207*5.54] mapped 4000 sequences
[M::worker_pipeline::862.165*5.54] mapped 4000 sequences
[M::worker_pipeline::868.719*5.54] mapped 4000 sequences
[M::worker_pipeline::875.054*5.55] mapped 4000 sequences
[M::worker_pipeline::880.950*5.55] mapped 4000 sequences
[M::worker_pipeline::887.575*5.55] mapped 4000 sequences
[M::worker_pipeline::893.860*5.55] mapped 4000 sequences
[M::worker_pipeline::899.605*5.55] mapped 4000 sequences
[M::worker_pipeline::906.313*5.55] mapped 4000 sequences
[M::worker_pipeline::913.150*5.55] mapped 4000 sequences
[M::worker_pipeline::919.540*5.55] mapped 4000 sequences
[M::worker_pipeline::926.297*5.55] mapped 4000 sequences
[M::worker_pipeline::932.832*5.55] mapped 4000 sequences
[M::worker_pipeline::939.313*5.55] mapped 4000 sequences
[M::worker_pipeline::945.625*5.55] mapped 4000 sequences
[M::worker_pipeline::951.926*5.56] mapped 4000 sequences
[M::worker_pipeline::958.043*5.56] mapped 4000 sequences
[M::worker_pipeline::963.972*5.56] mapped 4000 sequences
[M::worker_pipeline::970.001*5.56] mapped 4000 sequences
[M::worker_pipeline::977.631*5.56] mapped 4000 sequences
[M::worker_pipeline::983.932*5.56] mapped 4000 sequences
[M::worker_pipeline::990.003*5.56] mapped 4000 sequences
[M::worker_pipeline::996.399*5.56] mapped 4000 sequences
[M::worker_pipeline::1002.662*5.56] mapped 4000 sequences
[M::worker_pipeline::1008.943*5.56] mapped 4000 sequences
[M::worker_pipeline::1015.389*5.56] mapped 4000 sequences
[M::worker_pipeline::1021.890*5.57] mapped 4000 sequences
[M::worker_pipeline::1027.780*5.57] mapped 4000 sequences
[M::worker_pipeline::1034.126*5.57] mapped 4000 sequences
[M::worker_pipeline::1040.206*5.57] mapped 4000 sequences
[M::worker_pipeline::1046.729*5.57] mapped 4000 sequences
[M::worker_pipeline::1052.916*5.57] mapped 4000 sequences
[M::worker_pipeline::1055.395*5.57] mapped 1357 sequences
[M::worker_pipeline::1061.854*5.57] mapped 4000 sequences
[M::worker_pipeline::1068.203*5.57] mapped 4000 sequences
[M::worker_pipeline::1074.793*5.57] mapped 4000 sequences
[M::worker_pipeline::1081.112*5.58] mapped 4000 sequences
[M::worker_pipeline::1087.247*5.58] mapped 4000 sequences
[M::worker_pipeline::1093.331*5.58] mapped 4000 sequences
[M::worker_pipeline::1099.427*5.58] mapped 4000 sequences
[M::worker_pipeline::1105.868*5.58] mapped 4000 sequences
[M::worker_pipeline::1111.737*5.58] mapped 4000 sequences
[M::worker_pipeline::1117.925*5.58] mapped 4000 sequences
[M::worker_pipeline::1124.187*5.58] mapped 4000 sequences
[M::worker_pipeline::1130.457*5.58] mapped 4000 sequences
[M::worker_pipeline::1136.963*5.58] mapped 4000 sequences
[M::worker_pipeline::1143.822*5.58] mapped 4000 sequences
[M::worker_pipeline::1150.051*5.59] mapped 4000 sequences
[M::worker_pipeline::1156.157*5.59] mapped 4000 sequences
[M::worker_pipeline::1162.119*5.59] mapped 4000 sequences
[M::worker_pipeline::1168.327*5.59] mapped 4000 sequences
[M::worker_pipeline::1174.564*5.59] mapped 4000 sequences
[M::worker_pipeline::1180.931*5.59] mapped 4000 sequences
[M::worker_pipeline::1186.816*5.59] mapped 4000 sequences
[M::worker_pipeline::1192.867*5.59] mapped 4000 sequences
[M::worker_pipeline::1199.224*5.59] mapped 4000 sequences
[M::worker_pipeline::1205.474*5.59] mapped 4000 sequences
[M::worker_pipeline::1211.455*5.59] mapped 4000 sequences
[M::worker_pipeline::1218.011*5.59] mapped 4000 sequences
[M::worker_pipeline::1223.946*5.59] mapped 4000 sequences
[M::worker_pipeline::1230.531*5.59] mapped 4000 sequences
[M::worker_pipeline::1236.452*5.59] mapped 4000 sequences
[M::worker_pipeline::1242.559*5.59] mapped 4000 sequences
[M::worker_pipeline::1248.309*5.59] mapped 4000 sequences
[M::worker_pipeline::1255.011*5.60] mapped 4000 sequences
[M::worker_pipeline::1261.270*5.60] mapped 4000 sequences
[M::worker_pipeline::1267.505*5.60] mapped 4000 sequences
[M::worker_pipeline::1273.069*5.60] mapped 4000 sequences
[M::worker_pipeline::1278.950*5.60] mapped 4000 sequences
[M::worker_pipeline::1285.173*5.60] mapped 4000 sequences
[M::worker_pipeline::1291.279*5.60] mapped 4000 sequences
[M::worker_pipeline::1297.298*5.60] mapped 4000 sequences
[M::worker_pipeline::1303.473*5.60] mapped 4000 sequences
[M::worker_pipeline::1309.549*5.60] mapped 4000 sequences
[M::worker_pipeline::1315.614*5.60] mapped 4000 sequences
[M::worker_pipeline::1321.969*5.60] mapped 4000 sequences
[M::worker_pipeline::1327.978*5.60] mapped 4000 sequences
[M::worker_pipeline::1334.290*5.60] mapped 4000 sequences
[M::worker_pipeline::1340.579*5.60] mapped 4000 sequences
[M::worker_pipeline::1347.242*5.60] mapped 4000 sequences
[M::worker_pipeline::1353.028*5.60] mapped 4000 sequences
[M::worker_pipeline::1359.102*5.60] mapped 4000 sequences
[M::worker_pipeline::1365.198*5.60] mapped 4000 sequences
[M::worker_pipeline::1370.906*5.61] mapped 4000 sequences
[M::worker_pipeline::1376.773*5.61] mapped 4000 sequences
[M::worker_pipeline::1382.627*5.61] mapped 4000 sequences
[M::worker_pipeline::1388.440*5.61] mapped 4000 sequences
[M::worker_pipeline::1394.476*5.61] mapped 4000 sequences
[M::worker_pipeline::1401.234*5.61] mapped 4000 sequences
[M::worker_pipeline::1407.647*5.61] mapped 4000 sequences
[M::worker_pipeline::1415.648*5.60] mapped 4000 sequences
[M::worker_pipeline::1421.479*5.60] mapped 4000 sequences
[M::worker_pipeline::1427.757*5.60] mapped 4000 sequences
[M::worker_pipeline::1433.609*5.60] mapped 4000 sequences
[M::worker_pipeline::1439.917*5.60] mapped 4000 sequences
[M::worker_pipeline::1445.928*5.60] mapped 4000 sequences
[M::worker_pipeline::1452.315*5.61] mapped 4000 sequences
[M::worker_pipeline::1459.300*5.60] mapped 4000 sequences
[M::worker_pipeline::1465.406*5.60] mapped 4000 sequences
[M::worker_pipeline::1471.799*5.61] mapped 4000 sequences
[M::worker_pipeline::1477.895*5.61] mapped 4000 sequences
[M::worker_pipeline::1483.617*5.61] mapped 4000 sequences
[M::worker_pipeline::1489.357*5.61] mapped 4000 sequences
[M::worker_pipeline::1495.302*5.61] mapped 4000 sequences
[M::worker_pipeline::1501.182*5.61] mapped 4000 sequences
[M::worker_pipeline::1507.843*5.61] mapped 4000 sequences
[M::worker_pipeline::1513.682*5.61] mapped 4000 sequences
[M::worker_pipeline::1519.675*5.61] mapped 4000 sequences
[M::worker_pipeline::1525.868*5.61] mapped 4000 sequences
[M::worker_pipeline::1532.245*5.61] mapped 4000 sequences
[M::worker_pipeline::1538.332*5.61] mapped 4000 sequences
[M::worker_pipeline::1544.912*5.61] mapped 4000 sequences
[M::worker_pipeline::1550.914*5.61] mapped 4000 sequences
[M::worker_pipeline::1574.696*5.56] mapped 4000 sequences
[M::worker_pipeline::1581.047*5.56] mapped 4000 sequences
[M::main] Version: 2.17-r941
[M::main] CMD: minimap2 -t6 -axsplice -k13 /no_backup_isis/enovoa/reference_fasta/zebrafish/reference/Danio_rerio.GRCz11.dna_sm.primary_assembly.fa /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch0.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch1.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch10.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch100.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch101.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch102.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch103.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch104.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch105.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch106.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch107.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch108.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch109.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch11.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch110.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch111.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch112.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch113.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch114.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch115.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch116.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch117.fast5.fastm.gz /nfs/no_backup/enovoa/nextflow_outputs/zebrafish_garvan/modPhred_ythdf23KO/ModPhred_RawOutput/reads/ythdf23KO_2hpf_Rep1/batch118.fast5.fastm.gz 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[M::main] Real time: 1581.204 sec; CPU: 8789.289 sec; Peak RSS: 8.880 GB