ref	RNA400000_adapter	RNA855092_adapter	P2_RNA060530_CU_HFD14_Prox_rep1	P2_RNA240430_CU_HFD14_Prox_rep2	P2_RNA240430_CU_HFD14_Prox_rep3	P2_RNA240430_CU_SFD14_Prox_rep1_rep3	P2_RNA240430_CU_SFD14_Prox_rep2	P2_RNA241007_CU_SFD14_Prox_rep4	P2_RNA241011_CU_HFD14_Prox_rep4	P2_RNA241012_CU_SFD14_Prox_rep5	P2_RNA241013_CU_HFD14_Prox_rep5	P2_RNA241014_CU_HFD14_Prox_rep6	P2_RNA241014_CU_SFD14_Prox_rep6	P2_RNA090530_CU_HFD14_Dist_rep1	P2_RNA090530_CU_HFD14_Dist_rep2	P2_RNA240430_CU_HFD14_Dist_rep3	P2_RNA240430_CU_SFD14_Dist_rep1_rep3	P2_RNA240430_CU_SFD14_Dist_rep3	P2_RNA241007_CU_HFD14_Dist_rep4	P2_RNA241008_CU_HFD14_Dist_rep5	P2_RNA241008_CU_HFD14_Dist_rep6	P2_RNA241008_CU_HFD14_Dist_rep7	P2_RNA241008_CU_SFD14_Dist_rep5	P2_RNA241008_CU_SFD14_Dist_rep6	P2_RNA241008_CU_SFD14_Dist_rep7	P2_RNA241009_CU_SFD14_Dist_rep4	P2_RNA241011_CU_HFD14_Dist_rep8
5S	4802	5633	82057	156960	75570	53135	67750	109500	133655	74476	65333	72297	38574	211595	114648	214559	88059	185076	27404	180726	207683	133885	124557	115129	363533	208371	147284
5.8S	25149	30836	75570	181991	57246	47292	56860	67793	92105	51490	52555	56440	22181	208893	157305	149440	128379	291069	365826	589363	379698	280636	301848	197514	483566	306664	309965
18S	39290	47445	83370	135426	61057	119394	88551	121442	102514	115537	75514	87643	55003	69468	111866	52129	65038	222570	324695	263010	217752	384214	322158	172493	165867	161447	486897
28S	192492	215780	198461	269916	120989	192233	178913	164005	208322	182114	135242	127799	87264	320631	572013	242661	390894	1107122	1043298	962111	681027	1514083	1527892	816998	507741	532523	1711288
12S	1523	2004	1478	3288	2053	1561	1964	1944	2926	2137	1876	2012	824	13147	11228	17229	10250	22723	58019	71593	48554	29773	34546	22808	66929	31984	37469
16S	3097	4211	3814	8288	5231	3616	4808	3849	6251	4578	3636	4504	1764	34390	24036	47137	24821	55129	124193	150670	114052	64178	69105	49407	143093	70504	77058
Ala-AGC	46	63	13	52	80	20	51	145	95	62	88	89	37	52	22	524	15	8	7	21	37	9	65	13	75	35	15
Ala-CGC	80	51	8	85	64	9	64	89	91	175	177	66	61	16	25	303	22	17	4	59	41	14	127	17	56	12	43
Arg-ACG	898	1308	353	538	1079	476	826	2313	2043	693	993	1082	917	346	149	4008	241	246	50	331	620	292	951	256	1597	474	424
Arg-CCG	685	971	1620	5394	6973	4056	8053	14029	12744	9120	13034	11330	6258	3012	1262	8432	1098	2251	290	3568	5738	1836	4904	2169	5949	4287	3929
Arg-CCT	75	89	62	475	441	130	545	398	644	1180	1444	767	464	184	168	953	163	231	25	1205	893	286	791	270	329	266	702
Arg-TCG	128	182	80	101	195	97	226	266	302	132	133	166	126	69	34	619	28	45	17	87	123	48	156	68	206	75	125
Arg-TCT	56	75	33	96	126	35	118	130	192	101	126	127	98	60	25	476	33	34	10	47	86	30	127	30	139	52	57
Asn-GTT	46	83	45	82	71	32	72	115	178	101	191	125	49	41	17	379	20	25	11	81	63	15	149	35	82	20	44
Asp-GTC	2723	3753	3270	12397	11331	5469	15098	21629	47614	19897	33935	40176	8905	5685	1920	18434	2050	2931	865	5889	9752	3782	6341	3641	10507	3993	5546
Cys-GCA	3	2	4	2	0	1	4	1	8	2	0	5	1	3	1	7	1	2	1	2	2	3	2	1	5	1	2
Gln-CTG	160	225	35	228	476	57	128	1198	1415	738	976	722	502	103	118	1399	33	48	21	166	449	87	443	130	893	327	263
Glu-CTC	3155	4060	7576	13399	16912	10425	16947	65278	82134	46080	52810	46312	24078	5726	2462	8705	2578	6320	1348	11428	17747	7305	10267	7234	16916	11705	12542
Glu-TTC	1591	2073	594	1254	1178	821	1391	6373	8981	4161	4469	5461	1530	610	295	3487	253	809	651	1762	2100	1135	1580	1111	2714	1020	1571
Gly-CCC	493	736	108	168	209	181	106	1111	1311	242	411	449	279	252	37	2342	68	111	25	139	308	95	488	108	1124	260	176
Gly-GCC	1701	2449	6086	10658	16019	7468	10304	42775	45460	30156	34276	22793	15582	7015	1696	25235	2735	3395	1319	8795	13030	3064	8416	3662	14399	7756	6091
Gly-TCC	517	705	254	466	513	291	304	3726	3365	1322	1880	1898	1230	645	212	6584	152	213	164	824	1110	288	1393	485	3193	1108	683
His-GTG	276	341	130	600	2092	207	456	6423	9207	2581	6902	7011	3489	369	164	6123	126	144	125	543	1812	339	1990	645	2524	1026	983
Ile-AAT	392	476	35	160	131	34	203	423	282	337	391	335	176	52	76	1451	58	24	10	196	191	29	655	70	261	75	93
Ile-TAT	76	131	75	98	111	55	101	644	546	249	395	397	245	58	38	1015	33	37	26	146	180	34	375	115	345	196	141
Leu-AAG	347	486	277	2924	2214	325	2585	930	550	1122	1853	3446	2034	272	458	6709	387	887	132	1518	2975	247	3357	881	698	278	1544
Leu-CAG	78	110	53	116	85	40	151	145	80	69	130	116	56	20	40	314	22	29	5	84	62	10	226	22	92	34	26
Leu-TAA	14	18	4	4	9	7	16	27	9	7	23	6	7	2	3	26	0	1	0	6	5	0	16	0	20	4	3
Lys-CTT	691	797	756	8534	13053	1837	8202	14835	13667	38368	42746	17767	10415	1073	2128	8117	1109	1597	559	14079	12409	3393	8741	3163	3370	2734	7092
Lys-TTT	264	306	127	1296	1114	297	1300	3639	3579	7011	8255	3198	2474	212	360	2283	183	176	69	1799	1129	440	2175	566	741	515	1101
Met-CAT	45	68	48	164	114	46	344	274	236	181	211	179	126	73	76	820	66	56	14	96	196	53	290	83	193	103	137
Phe-GAA	118	158	23	38	59	19	50	314	268	120	193	237	134	34	40	1017	13	12	7	60	74	13	268	37	154	43	64
Pro-AGG	312	374	66	1018	395	183	735	838	670	387	648	694	356	173	114	1604	99	107	15	181	275	51	1244	134	343	94	176
SeC-TCA	2186	3023	3099	6209	11298	5839	6032	30515	34539	13177	15811	21471	13119	9890	2943	34740	2507	3732	1436	11174	16449	7688	10768	6766	31821	14835	11104
Ser-AGA	220	333	31	82	272	68	132	678	566	202	374	628	334	102	40	1096	37	73	26	165	369	85	332	156	570	198	368
Ser-CGA	78	120	20	57	188	36	77	356	382	162	233	225	148	37	12	270	4	29	6	72	123	28	110	26	189	101	65
Ser-GCT	60	55	139	277	444	134	289	629	632	359	552	770	452	165	85	792	60	177	19	264	547	84	398	162	377	234	367
Thr-AGT	27	59	10	17	21	10	24	91	58	43	65	48	27	7	5	195	7	3	1	24	31	6	72	10	51	10	30
Thr-CGT	10	8	6	74	71	8	81	65	75	257	353	194	95	7	45	118	20	12	3	173	167	13	188	31	42	23	86
Thr-TGT	8	14	10	16	21	9	22	43	36	26	33	18	12	6	4	48	2	3	1	14	11	3	13	6	38	8	5
Trp-CCA	159	186	24	182	115	46	236	625	503	460	518	338	205	76	327	953	191	177	43	426	328	182	1003	132	404	177	286
Tyr-GTA	153	176	131	769	2170	193	595	3795	4902	10482	12503	6078	3832	131	341	2632	137	185	176	3973	3373	784	1863	956	550	635	1890
Val-AAC	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Val-CAC	467	704	69	125	147	65	101	843	868	272	347	363	233	250	104	3153	74	138	44	285	451	201	557	287	968	376	476
Val-TAC	65	79	9	25	39	11	36	188	132	52	68	108	39	37	16	322	9	20	7	41	64	32	100	44	126	42	62
iMet-CAT	1008	1268	264	593	619	290	474	1804	2740	704	1732	1145	731	847	236	11062	175	219	79	895	1016	243	1958	333	2342	791	713
mtAla-TGC	228	367	740	582	912	460	318	633	734	191	333	522	395	974	130	4077	292	262	96	448	1032	252	540	350	2017	744	515
mtArg-TCG	130	178	440	716	685	375	634	733	798	198	310	622	320	1458	213	5383	458	544	105	781	1434	378	1169	717	3296	1688	939
mtAsn-GTT	23	41	262	539	528	203	390	398	436	159	253	317	203	539	143	2546	192	238	43	403	796	184	402	330	1005	626	418
mtAsp-GTC	162	252	274	308	460	340	505	649	644	170	285	556	300	319	43	2183	109	189	19	197	487	83	273	277	1050	518	280
mtCys-GCA	79	143	225	211	431	169	196	457	472	92	172	288	200	403	57	2088	102	94	20	192	471	98	283	166	800	329	313
mtGln-TTG	74	167	152	115	194	103	81	162	164	53	81	89	80	275	55	1626	76	80	36	156	293	73	158	81	470	224	160
mtGlu-TTC	157	222	404	358	694	331	274	632	627	193	314	493	394	862	145	4697	237	262	67	494	1088	243	641	435	1729	864	653
mtGly-TCC	276	426	467	313	372	221	170	421	460	104	139	316	175	512	93	2584	158	166	27	202	575	172	311	159	1560	482	301
mtHis-GTG	324	507	421	334	418	196	216	525	449	109	186	371	156	5146	1006	26476	1681	1529	442	2750	4610	1341	5472	1585	15937	5085	2247
mtIle-GAT	60	86	135	198	240	133	178	214	235	55	88	189	135	405	88	2117	173	187	59	332	636	130	573	278	1045	581	389
mtLeu-TAA	175	262	497	667	773	310	385	725	531	164	298	416	266	1259	212	6286	359	328	81	498	902	179	726	340	2154	867	649
mtLeu-TAG	250	375	1144	884	1706	725	685	1478	1904	497	913	1231	701	1263	166	5353	356	429	84	994	1669	274	595	343	2765	1075	801
mtLys-TTT	286	375	600	795	1526	627	539	1882	1929	467	750	1272	721	2543	484	12825	766	965	281	2004	3873	1048	2860	1223	9684	3932	1786
mtMet-CAT	151	224	288	245	284	137	145	288	287	61	96	227	98	397	126	2355	161	191	40	236	564	140	443	219	1205	395	280
mtPhe-GAA	345	525	546	734	871	473	540	1170	1214	330	551	1034	712	1080	138	4707	248	260	59	538	1329	274	918	640	2667	1354	996
mtPro-TGG	206	260	518	427	702	275	278	578	703	168	271	453	240	874	141	3935	209	233	70	356	827	210	442	338	2104	712	579
mtSer-GCT	84	118	119	166	416	119	103	620	788	171	314	527	202	250	38	1789	66	52	13	120	309	61	180	89	907	281	150
mtSer-TGA	14	12	18	78	48	22	75	30	42	34	61	36	15	27	20	151	13	15	9	100	34	15	47	18	37	29	26
mtThr-TGT	103	146	200	441	309	119	296	288	267	83	218	213	128	545	129	2962	212	207	31	398	669	160	767	253	1327	574	404
mtTrp-TCA	269	435	325	350	470	320	233	495	597	131	220	413	190	713	96	4388	126	284	60	346	784	124	367	206	2075	541	399
mtTyr-GTA	5	5	2	17	10	0	7	10	3	4	15	11	4	4	1	118	6	1	0	18	8	1	36	3	17	6	6
mtVal-TAC	660	1025	3138	2328	3995	1739	1611	2991	4137	1027	1457	3161	1496	3489	594	12206	926	1020	185	1371	3577	878	1799	1297	7106	3115	2088
chr1	10623	13498	143445	132133	144694	136887	135601	178664	222017	132043	148350	146893	81744	60661	57010	83773	44613	64920	80462	110187	94365	86938	90839	43466	80614	82034	127311
chr2	10396	13262	118483	101445	100920	119801	109475	121614	156296	101733	109209	109713	63464	47783	52068	48563	37606	61065	76142	89095	70715	74649	83925	35270	63978	65233	109633
chr3	6449	8048	55145	49223	44963	61197	51080	62377	80008	50450	53259	55647	32474	34838	35447	29610	26962	35649	50065	57847	43205	50485	52976	22714	40892	43555	70224
chr4	9007	11530	120393	105148	108084	111320	107249	126231	153312	95293	102344	105599	60372	43603	43515	61074	33932	52854	57591	77695	66999	63969	70280	32709	60231	58886	95075
chr5	8755	10935	109306	95853	92729	104711	97797	108674	127605	82217	89166	91221	54401	41504	42549	47821	31241	52470	58499	74810	61777	63934	68818	32501	58550	55335	92589
chr6	7216	9320	62172	54636	52394	67131	59749	67341	82762	54529	58170	59777	35112	34287	36754	29426	26902	41884	56017	63414	47714	55916	59113	25700	46775	45570	79300
chr7	7971	9806	86152	73478	70115	83991	77789	85370	108244	74633	78825	77540	45612	32330	36956	33159	26889	45262	52553	66451	52726	53877	62474	26621	48002	46314	80771
chr8	7008	9195	75664	58821	60145	75105	65108	73838	92537	57462	62604	65731	39311	31364	35449	29746	25531	40628	45772	55411	44858	50848	56246	23715	41658	42658	72670
chr9	8000	10016	131159	114689	127652	119767	121788	156778	180973	106459	121269	122884	70012	42662	40404	67908	32281	51486	55076	75104	70528	59137	65642	32808	62283	58697	92719
chr10	6947	8715	73906	63364	63887	77192	69740	81710	99309	67470	69769	70542	42386	31839	35240	29170	26968	38630	51143	59918	46956	51513	56581	24294	42007	43136	75419
chr11	9822	12742	121487	95215	100282	111877	106472	119585	150277	97873	102679	102541	60314	39222	44507	44162	31836	58860	68857	84907	68700	65985	76980	32369	60757	59448	101372
chr12	6124	7357	58024	71725	51125	58155	60928	56508	71581	53393	59872	51235	29731	27249	30615	26179	22469	33336	42371	56005	38787	40883	47671	19712	34135	34687	60670
chr13	5722	7100	44670	42322	37190	48998	44415	49104	59193	41949	42784	43560	26049	25425	28331	22109	21290	31536	47334	53532	40857	41397	52524	20569	31901	34051	63854
chr14	5314	6814	54596	48393	44982	59189	52673	59889	74316	49393	51622	53341	31552	25924	27848	21999	20731	29703	40047	44522	34003	40400	42473	18297	32284	34493	56359
chr15	5373	6883	59209	48535	48226	60011	52830	61816	76159	47549	51246	52971	31363	24893	26365	26051	20110	30566	37888	46103	35388	38395	42091	18226	33909	33598	54746
chr16	4917	6375	54313	48465	44320	56016	50466	56331	67790	44976	47785	48278	29634	25165	30082	24816	22106	32483	39440	55930	36227	40141	44942	17290	32577	32705	55324
chr17	14481	17758	139525	103911	91347	132231	118073	112683	144481	94531	105138	88789	72611	28946	37728	30031	29351	56510	47480	57197	47565	63263	84804	34157	43182	43821	98371
chr18	4347	5410	44743	47010	39450	49014	47406	49548	61287	43174	46738	44068	26648	20651	22488	18587	16712	23747	34575	38798	28739	33897	35811	14685	25326	29556	48117
chr19	5605	7279	60980	50814	52935	60717	55825	65615	84466	53737	58521	59199	33257	22285	26771	28556	17881	34792	39476	47371	40699	39356	46666	18806	32626	35101	61518
chrX	5438	7147	49542	45300	43265	54644	45157	60784	78602	48907	53524	53896	30545	32275	33269	26807	24177	31524	50706	52025	40720	49630	51595	20533	36085	40942	69623
chrY	124	168	1092	1087	833	1348	1007	1269	1878	1058	1220	1268	670	970	879	638	548	693	1226	1337	891	1145	1060	506	1231	1228	1634
chrM	87	65	448	741	369	372	426	397	458	304	429	407	152	1298	1006	942	525	1574	2384	2840	2282	1322	1316	835	1739	1707	1619
GL456210.1	0	0	0	0	1	1	0	1	1	0	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
GL456211.1	0	0	2	0	0	0	0	2	1	1	0	0	2	2	0	0	0	0	0	1	0	0	0	1	2	2	0
GL456212.1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
GL456219.1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
GL456221.1	0	0	0	1	1	1	0	1	1	2	0	2	1	0	0	0	0	0	0	0	1	0	3	0	0	1	1
GL456233.2	3	9	45	45	33	41	45	60	69	31	51	77	31	30	47	21	14	41	61	59	38	62	50	15	54	27	91
GL456239.1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	2	1	0	0	0	0	0	1	0	0	3	4	2
GL456354.1	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	1	3	0	1	0	1	1	2	0	0	0
GL456359.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
GL456360.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
GL456366.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
GL456367.1	0	0	1	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1
GL456368.1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0
GL456370.1	0	1	20	6	3	9	1	11	119	10	20	11	4	18	6	9	10	5	13	9	9	50	12	9	10	115	24
GL456372.1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	2	0	1
GL456378.1	0	3	0	0	1	2	2	1	3	1	1	3	1	3	4	3	0	2	1	3	1	2	2	2	2	1	5
GL456379.1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2
GL456381.1	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1
GL456382.1	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1
GL456383.1	0	0	0	2	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0
GL456385.1	0	0	0	2	0	1	1	1	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1
GL456387.1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	2	1	0	1	0	1	0	0
GL456389.1	0	0	0	0	0	2	0	0	1	1	0	1	0	0	0	1	0	0	0	2	0	0	2	0	0	1	2
GL456390.1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	0	0	0	0	0
GL456392.1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	0
GL456394.1	0	0	1	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0
GL456396.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0
JH584295.1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1
JH584296.1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
JH584297.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
JH584298.1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
JH584299.1	0	0	2	2	2	1	1	3	3	0	2	2	1	1	2	1	2	1	3	4	1	2	3	1	4	3	5
JH584300.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
JH584301.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
JH584302.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
JH584303.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
JH584304.1	7	4	38	29	39	42	29	48	48	30	39	36	43	7	9	9	25	16	26	25	22	26	21	21	18	9	28
MU069434.1	0	0	1	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
MU069435.1	346	335	4725	3500	3009	4043	3525	3993	5397	3176	3937	2765	2394	543	817	459	596	1669	1107	1327	859	1450	2200	824	578	811	2595
antisense	36	42	424	449	333	454	316	439	483	262	372	355	446	277	163	386	440	179	328	466	309	539	291	174	772	440	855
not_unique	1792143	2371891	7257862	8916446	5960543	8526744	4297448	9505757	17143631	8058512	7604380	10282387	4691066	12660481	9582912	8825428	9417497	6130967	8885801	12574547	9458386	14941669	10120123	5733577	11504408	12547518	13164965
*	436739	615425	991238	613831	456955	386243	297902	366562	592700	292181	327339	572008	334420	781884	574330	679376	384127	328407	163033	353542	334680	563408	563529	373401	672388	524579	604634