guppy_basecaller --disable_pings --device cuda:0 -c rna_r9.4.1_70bps_hac.cfg --fast5_out -ri /no_backup_isis/enovoa/data/ont/viral_RNA_coronavirus/8F6N9_OSF_Covid19_Korea/Vero_Control/ -s /no_backup_isis/enovoa/analysis/basecalling/guppy3/viral_RNA_coronavirus/8F6N9_OSF_Covid19_Korea/Vero_Control/ ONT Guppy basecalling software version 3.1.5+781ed57 config file: /home/lpryszcz/src/ont-guppy_3.1.5/data/rna_r9.4.1_70bps_hac.cfg model file: /home/lpryszcz/src/ont-guppy_3.1.5/data/template_rna_r9.4.1_70bps_hac.jsn input path: /no_backup_isis/enovoa/data/ont/viral_RNA_coronavirus/8F6N9_OSF_Covid19_Korea/Vero_Control/ save path: /no_backup_isis/enovoa/analysis/basecalling/guppy3/viral_RNA_coronavirus/8F6N9_OSF_Covid19_Korea/Vero_Control/ chunk size: 1000 chunks per runner: 1000 records per file: 4000 num basecallers: 4 gpu device: cuda:0 kernel path: runners per device: 2 Found 360 fast5 files to process. Init time: 2293 ms 0% 10 20 30 40 50 60 70 80 90 100% |----|----|----|----|----|----|----|----|----|----| *************************************************** Caller time: 51606778 ms, Samples called: 75218832401, samples/s: 1.45754e+06 Finishing up any open output files. Basecalling completed successfully.