FastQCFastQC Report
Mon 23 Mar 2020
8F6N9_OSF_Covid19_Korea_Vero_Control.reads_U2T.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename8F6N9_OSF_Covid19_Korea_Vero_Control.reads_U2T.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1439291
Sequences flagged as poor quality0
Sequence length1-72949
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATTGTGTTTGTTAGTCGCTATGGCTGTCTCTAAAGTTTACGCTAGATC90760.6305882549116196No Hit
CCAGCTAGATCCGAAAGATTGGCTAAGTTGAACCAATTGTTGAGAATCGA29440.20454515452399827No Hit
AGATTGTGTTTGTTAGTCGCTATGGCTGTCTAAAGTTTACGCTAGATCCG25750.17890753155546724No Hit
AGATTGTGTTTGTTAGTCGCTATGGCTGTCTTAAAGTTTACGCTAGATCC18110.12582584063959268No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)