Reading file annot.gff Number of genes 15775 Number of transcripts 17568 Number of mrnas with utr both sides 4850 Number of mrnas with at least one utr 7834 Number of cdss 17568 Number of exons 89027 Number of five_prime_utrs 5745 Number of three_prime_utrs 6939 Number of exon in cds 86089 Number of exon in five_prime_utr 7828 Number of exon in three_prime_utr 7723 Number of intron in cds 68521 Number of intron in exon 71459 Number of intron in five_prime_utr 2083 Number of intron in three_prime_utr 784 Number of single exon gene 3689 Number of single exon transcript 3698 mean transcripts per gene 1.1 mean cdss per transcript 1.0 mean exons per transcript 5.1 mean five_prime_utrs per transcript 0.3 mean three_prime_utrs per transcript 0.4 mean exons per cds 4.9 mean exons per five_prime_utr 1.4 mean exons per three_prime_utr 1.1 mean introns in cdss per transcript 3.9 mean introns in exons per transcript 4.1 mean introns in five_prime_utrs per transcript0.1 mean introns in three_prime_utrs per transcript0.0 Total gene length 58951903 Total transcript length 74068061 Total cds length 22440554 Total exon length 28999126 Total five_prime_utr length 1814797 Total three_prime_utr length 4743775 Total intron length per cds 40185860 Total intron length per exon 45140394 Total intron length per five_prime_utr 4453682 Total intron length per three_prime_utr 371105 mean gene length 3737 mean transcript length 4216 mean cds length 1277 mean exon length 325 mean five_prime_utr length 315 mean three_prime_utr length 683 mean cds piece length 260 mean five_prime_utr piece length 231 mean three_prime_utr piece length 614 mean intron in cds length 586 mean intron in exon length 631 mean intron in five_prime_utr length 2138 mean intron in three_prime_utr length 473 Longest genes 214391 Longest transcripts 214391 Longest cdss 44004 Longest exons 11283 Longest five_prime_utrs 6790 Longest three_prime_utrs 7350 Longest cds piece 11283 Longest five_prime_utr piece 6790 Longest three_prime_utr piece 7350 Longest intron into cds part 90267 Longest intron into exon part 96982 Longest intron into five_prime_utr part 96982 Longest intron into three_prime_utr part 24118 Shortest genes 150 Shortest transcripts 150 Shortest cdss 150 Shortest exons 2 Shortest five_prime_utrs 1 Shortest three_prime_utrs 1 Shortest cds piece 1 Shortest five_prime_utr piece 1 Shortest three_prime_utr piece 1 Shortest intron into cds part 22 Shortest intron into exon part 22 Shortest intron into five_prime_utr part 41 Shortest intron into three_prime_utr part 57 Apparently we have isoforms : Number of level1 features: 15775 / Number of level2 features: 17568 We will proceed to the statistics analysis using only the mRNA with the longest cds Number of genes 15775 Number of transcripts 15775 Number of mrnas with utr both sides 3567 Number of mrnas with at least one utr 6055 Number of cdss 15775 Number of exons 73454 Number of five_prime_utrs 4336 Number of three_prime_utrs 5286 Number of exon in cds 72015 Number of exon in five_prime_utr 5472 Number of exon in three_prime_utr 5539 Number of intron in cds 56240 Number of intron in exon 57679 Number of intron in five_prime_utr 1136 Number of intron in three_prime_utr 253 Number of single exon gene 3695 Number of single exon transcript 3695 mean transcripts per gene 1.0 mean cdss per transcript 1.0 mean exons per transcript 4.7 mean five_prime_utrs per transcript 0.3 mean three_prime_utrs per transcript 0.3 mean exons per cds 4.6 mean exons per five_prime_utr 1.3 mean exons per three_prime_utr 1.0 mean introns in cdss per transcript 3.6 mean introns in exons per transcript 3.7 mean introns in five_prime_utrs per transcript0.1 mean introns in three_prime_utrs per transcript0.0 Total gene length 58951903 Total transcript length 58390303 Total cds length 19004867 Total exon length 23547249 Total five_prime_utr length 1204340 Total three_prime_utr length 3338042 Total intron length per cds 32003533 Total intron length per exon 34900733 Total intron length per five_prime_utr 2631020 Total intron length per three_prime_utr 174900 mean gene length 3737 mean transcript length 3701 mean cds length 1204 mean exon length 320 mean five_prime_utr length 277 mean three_prime_utr length 631 mean cds piece length 263 mean five_prime_utr piece length 220 mean three_prime_utr piece length 602 mean intron in cds length 569 mean intron in exon length 605 mean intron in five_prime_utr length 2316 mean intron in three_prime_utr length 691 Longest genes 214391 Longest transcripts 214391 Longest cdss 44004 Longest exons 11283 Longest five_prime_utrs 6790 Longest three_prime_utrs 7350 Longest cds piece 11283 Longest five_prime_utr piece 6790 Longest three_prime_utr piece 7350 Longest intron into cds part 90267 Longest intron into exon part 94317 Longest intron into five_prime_utr part 94317 Longest intron into three_prime_utr part 24118 Shortest genes 150 Shortest transcripts 150 Shortest cdss 150 Shortest exons 2 Shortest five_prime_utrs 1 Shortest three_prime_utrs 1 Shortest cds piece 1 Shortest five_prime_utr piece 1 Shortest three_prime_utr piece 1 Shortest intron into cds part 22 Shortest intron into exon part 22 Shortest intron into five_prime_utr part 41 Shortest intron into three_prime_utr part 57 Parsing Finished Bye Bye.