nextflow run -with-report -bg main.nf --config /users/bi/thermoso/projects/Adorsata/params.full.last.conf
16f1f9f42bbdc6ce44090f33c76c47d7
4af38849-bf3e-4b62-b679-cb5dde5cde59
These plots give an overview of the distribution of resource usage for each process.
This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.
task_id | process | tag | status | hash | allocated cpus | %cpu | allocated memory | %mem | vmem | rss | peak_vmem | peak_rss | allocated time | duration | realtime | script | exit | submit | start | complete | rchar | wchar | syscr | syscw | read_bytes | write_bytes | native_id | name | module | container | disk | attempt | scratch | workdir |
---|
task_id | process | tag | status | hash | allocated cpus | %cpu | allocated memory | %mem | vmem | rss | peak_vmem | peak_rss | allocated time | duration | realtime | script | exit | submit | start | complete | rchar | wchar | syscr | syscw | read_bytes | write_bytes | native_id | name | module | container | disk | attempt | scratch | workdir |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cleanGFF | - | COMPLETED | e2/bacaf3 | 1 | 97.1 | 24.000 GB | 0.1 | 1.243 GB | 1.215 GB | 1.243 GB | 1.215 GB | 6h 0m | 4m 11s | 2m 57s |
| 0 | 2021-06-18T14:35:40+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:39:51+00:00 | 52.375 MB | 53.706 MB | 6.944 kB | 6.730 kB | 53.240 MB | 53.711 MB | 74311441 | cleanGFF | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-agat-0.1.0--pl526r35_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/e2/bacaf30b44f58068e98b340902acb3 |
2 | diamond | - | COMPLETED | e0/b5a18f | 8 | 612.0 | 24.000 GB | 5.7 | 7.637 GB | 7.204 GB | 7.679 GB | 7.204 GB | 2d 0h | 44m 49s | 44m 24s |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:36:26+00:00 | 2021-06-18T15:20:32+00:00 | 155.254 GB | 3.096 GB | 4.854 MB | 105.053 kB | 152.767 GB | 3.098 GB | 74311465 | diamond (1) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/e0/b5a18fa796c1afc2208f6e3f863d67 |
3 | diamond | - | COMPLETED | 19/472a5f | 8 | 125.8 | 24.000 GB | 5.7 | 7.554 GB | 7.213 GB | 7.767 GB | 7.256 GB | 2d 0h | 3h 47m | 3h 41m |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:41:26+00:00 | 2021-06-18T18:23:12+00:00 | 155.023 GB | 2.870 GB | 4.847 MB | 97.807 kB | 152.783 GB | 2.871 GB | 74311472 | diamond (2) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/19/472a5f7cfa9ee97577babaa5e1d548 |
4 | kofamscan | - | COMPLETED | f1/14d5e3 | 8 | 276.2 | 24.000 GB | 0.3 | 1.088 GB | 459.270 MB | 1.212 GB | 459.270 MB | 6h 0m | 10m 12s | 9m 49s |
| 0 | 2021-06-18T14:35:39+00:00 | 2021-06-18T14:36:11+00:00 | 2021-06-18T14:45:51+00:00 | 11.652 GB | 2.469 GB | 1.014 MB | 746.170 kB | 6.014 GB | 3.719 GB | 74311428 | kofamscan (1) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/f1/14d5e3b6f339a119dd05774cb1d2e7 |
5 | kofamscan | - | COMPLETED | ee/025d5a | 8 | 233.8 | 24.000 GB | 0.1 | 765.246 MB | 185.379 MB | 1.136 GB | 185.379 MB | 6h 0m | 10m 51s | 10m 18s |
| 0 | 2021-06-18T14:35:40+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:46:31+00:00 | 11.271 GB | 2.698 GB | 1014.749 kB | 813.034 kB | 6.014 GB | 4.055 GB | 74311436 | kofamscan (2) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/ee/025d5ac4b27cc789bf83044c85154d |
6 | kofamscan | - | COMPLETED | a2/4026d9 | 8 | 458.0 | 24.000 GB | 0.2 | 669.645 MB | 286.629 MB | 792.910 MB | 286.629 MB | 6h 0m | 5m 46s | 5m 12s |
| 0 | 2021-06-18T14:35:40+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:41:26+00:00 | 10.981 GB | 2.723 GB | 1014.748 kB | 815.143 kB | 6.014 GB | 4.099 GB | 74311440 | kofamscan (3) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/a2/4026d983c07a77794b1f1b3f00df62 |
7 | kofamscan | - | COMPLETED | 9a/3608bb | 8 | 477.4 | 24.000 GB | 0.3 | 1.007 GB | 397.762 MB | 1.110 GB | 398.379 MB | 6h 0m | 6m 50s | 5m 58s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:42:31+00:00 | 11.569 GB | 2.789 GB | 1.014 MB | 837.166 kB | 6.014 GB | 4.186 GB | 74311452 | kofamscan (4) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/9a/3608bb3252cc9d00162e791c97298e |
8 | kofamscan | - | COMPLETED | 33/a463ae | 8 | 362.2 | 24.000 GB | 0.2 | 1018.508 MB | 448.660 MB | 1.168 GB | 448.660 MB | 6h 0m | 11m 12s | 10m 43s |
| 0 | 2021-06-18T14:35:39+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:46:51+00:00 | 11.441 GB | 2.676 GB | 1.014 MB | 806.994 kB | 6.018 GB | 4.014 GB | 74311434 | kofamscan (5) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/33/a463aebf6c484075afe0960fa476c9 |
9 | kofamscan | - | COMPLETED | 29/4866cf | 8 | 424.4 | 24.000 GB | 0.2 | 718.270 MB | 331.617 MB | 976.590 MB | 331.617 MB | 6h 0m | 7m 46s | 6m 56s |
| 0 | 2021-06-18T14:35:40+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:43:26+00:00 | 12.180 GB | 2.572 GB | 1.036 MB | 791.455 kB | 6.021 GB | 3.831 GB | 74311438 | kofamscan (6) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/29/4866cff2e313ed4725ed2ec85487f6 |
10 | kofamscan | - | COMPLETED | 6e/7fd615 | 8 | 284.1 | 24.000 GB | 0.3 | 770.152 MB | 425.059 MB | 924.297 MB | 425.059 MB | 6h 0m | 10m 11s | 9m 39s |
| 0 | 2021-06-18T14:35:40+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:45:52+00:00 | 12.064 GB | 2.546 GB | 1.036 MB | 765.994 kB | 6.015 GB | 3.841 GB | 74311437 | kofamscan (7) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/6e/7fd6157d5fc9d79a7656a1f52e7d68 |
11 | kofamscan | - | COMPLETED | c2/37e42c | 8 | 409.4 | 24.000 GB | 0.4 | 1.055 GB | 534.605 MB | 1.117 GB | 534.605 MB | 6h 0m | 7m 51s | 7m 19s |
| 0 | 2021-06-18T14:35:40+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:43:31+00:00 | 11.634 GB | 2.228 GB | 1.014 MB | 697.332 kB | 6.014 GB | 3.348 GB | 74311442 | kofamscan (8) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-kofamscan-1.2.0--0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/c2/37e42c8e345b407a9f2005201e28ce |
12 | diamond | - | COMPLETED | 0b/e51432 | 8 | 510.3 | 24.000 GB | 5.8 | 7.739 GB | 7.240 GB | 7.841 GB | 7.295 GB | 2d 0h | 1h 24m | 1h 15m |
| 0 | 2021-06-18T14:35:43+00:00 | 2021-06-18T14:45:41+00:00 | 2021-06-18T16:00:22+00:00 | 155.664 GB | 3.518 GB | 4.867 MB | 118.547 kB | 152.753 GB | 3.520 GB | 74311475 | diamond (3) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/0b/e51432de11311008453ea33c6308bc |
13 | diamond | - | COMPLETED | b6/be3900 | 8 | 142.4 | 24.000 GB | 5.8 | 7.629 GB | 7.341 GB | 7.889 GB | 7.413 GB | 2d 0h | 4h 8m | 3h 59m |
| 0 | 2021-06-18T14:35:43+00:00 | 2021-06-18T14:44:57+00:00 | 2021-06-18T18:43:57+00:00 | 156.419 GB | 4.283 GB | 4.891 MB | 143.051 kB | 152.816 GB | 4.285 GB | 74311474 | diamond (4) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/b6/be39005a3443c7e8b137f2f48836bc |
14 | diamond | - | COMPLETED | c3/343969 | 8 | 619.7 | 24.000 GB | 5.8 | 7.854 GB | 7.301 GB | 7.916 GB | 7.302 GB | 2d 0h | 44m 59s | 44m 27s |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:36:26+00:00 | 2021-06-18T15:20:42+00:00 | 155.597 GB | 3.441 GB | 4.865 MB | 116.084 kB | 152.756 GB | 3.443 GB | 74311467 | diamond (5) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/c3/343969f58e5b3619cbdb5d6273d4dc |
15 | diamond | - | COMPLETED | 16/cf2675 | 8 | 589.7 | 24.000 GB | 5.8 | 7.723 GB | 7.276 GB | 7.790 GB | 7.308 GB | 2d 0h | 54m 49s | 45m 53s |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:44:36+00:00 | 2021-06-18T15:30:32+00:00 | 154.993 GB | 2.829 GB | 4.846 MB | 96.499 kB | 152.726 GB | 2.831 GB | 74311473 | diamond (6) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/16/cf2675aa2bf7959dbfe3e6ae0f7886 |
16 | diamond | - | COMPLETED | 0b/4523fc | 8 | 621.7 | 24.000 GB | 5.8 | 7.721 GB | 7.312 GB | 7.805 GB | 7.313 GB | 2d 0h | 45m 20s | 45m 3s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T15:21:02+00:00 | 155.626 GB | 3.478 GB | 4.866 MB | 117.269 kB | 75.010 GB | 3.480 GB | 74311451 | diamond (7) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/0b/4523fc6db610448a7c0fdc7c34e7fe |
17 | diamond | - | COMPLETED | d0/42b442 | 8 | 613.4 | 24.000 GB | 5.7 | 7.539 GB | 7.139 GB | 7.784 GB | 7.299 GB | 2d 0h | 45m 19s | 45m 5s |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:36:26+00:00 | 2021-06-18T15:21:02+00:00 | 155.209 GB | 3.059 GB | 4.853 MB | 103.861 kB | 78.426 GB | 3.061 GB | 74311471 | diamond (8) | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/singularity/quay.io-biocontainers-diamond-0.9.30--h56fc30b_0.img | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/d0/42b44227ad2acb1a590e7c8fa8f86c |
18 | ipscn | - | COMPLETED | 0f/6a0df0 | 8 | 226.2 | 24.000 GB | 3.3 | 13.622 GB | 4.215 GB | 19.195 GB | 4.395 GB | 6h 0m | 18m 19s | 17m 46s |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:36:26+00:00 | 2021-06-18T14:54:02+00:00 | 60.276 GB | 482.080 MB | 7.888 MB | 94.366 kB | 17.352 GB | 531.887 MB | 74311464 | ipscn (1) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/0f/6a0df0f918f9adbca8cf219e84ac08 |
19 | ipscn | - | COMPLETED | c7/726038 | 8 | 287.2 | 24.000 GB | 3.5 | 13.562 GB | 4.446 GB | 19.122 GB | 4.610 GB | 6h 0m | 10m 15s | 9m 28s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:45:56+00:00 | 60.456 GB | 401.520 MB | 7.979 MB | 68.505 kB | 15.234 GB | 435.352 MB | 74311447 | ipscn (2) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/c7/726038c0b60eb35db2b5f0459ceb9a |
20 | ipscn | - | COMPLETED | 79/7a2062 | 8 | 198.1 | 24.000 GB | 3.2 | 13.235 GB | 4.136 GB | 18.986 GB | 4.231 GB | 6h 0m | 29m 35s | 28m 31s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T15:05:17+00:00 | 63.239 GB | 639.856 MB | 8.356 MB | 138.153 kB | 17.448 GB | 716.633 MB | 74311456 | ipscn (3) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/79/7a206228706b9dc338c5ff3d219e1e |
21 | ipscn | - | COMPLETED | cc/30b275 | 8 | 217.6 | 24.000 GB | 0.4 | 13.467 GB | 4.102 GB | 18.982 GB | 4.280 GB | 6h 0m | 20m 21s | 19m 39s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:56:02+00:00 | 61.933 GB | 383.572 MB | 8.201 MB | 76.098 kB | 4.644 GB | 406.555 MB | 74311453 | ipscn (4) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/cc/30b2756478f2e4e87c835f5007bd4d |
22 | ipscn | - | COMPLETED | 2a/f927bc | 8 | 245.7 | 24.000 GB | 0.4 | 13.286 GB | 4.045 GB | 18.924 GB | 4.203 GB | 6h 0m | 19m 20s | 18m 23s |
| 0 | 2021-06-18T14:35:42+00:00 | 2021-06-18T14:36:26+00:00 | 2021-06-18T14:55:02+00:00 | 64.525 GB | 483.188 MB | 8.613 MB | 87.578 kB | 12.942 GB | 531.980 MB | 74311461 | ipscn (5) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/2a/f927bc9f74e059416b9ba0ae02d623 |
23 | ipscn | - | COMPLETED | 97/d535a1 | 8 | 258.1 | 24.000 GB | 3.2 | 13.383 GB | 4.141 GB | 18.865 GB | 4.250 GB | 6h 0m | 13m 20s | 12m 58s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:49:02+00:00 | 58.593 GB | 469.479 MB | 7.737 MB | 87.005 kB | 215.414 MB | 526.848 MB | 74311458 | ipscn (6) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/97/d535a11851aa37292f3b804ed2f61d |
24 | ipscn | - | COMPLETED | b8/8d4808 | 8 | 219.5 | 24.000 GB | 3.4 | 13.508 GB | 4.374 GB | 19.176 GB | 4.508 GB | 6h 0m | 20m 17s | 19m 27s |
| 0 | 2021-06-18T14:35:39+00:00 | 2021-06-18T14:36:11+00:00 | 2021-06-18T14:55:56+00:00 | 59.729 GB | 577.975 MB | 7.898 MB | 102.971 kB | 247.787 MB | 659.594 MB | 74311429 | ipscn (7) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/b8/8d4808aff1060c3f90d68137e7949e |
25 | ipscn | - | COMPLETED | cc/ac2355 | 8 | 238.8 | 24.000 GB | 3.2 | 13.153 GB | 4.188 GB | 18.876 GB | 4.258 GB | 6h 0m | 15m 20s | 14m 51s |
| 0 | 2021-06-18T14:35:41+00:00 | 2021-06-18T14:36:12+00:00 | 2021-06-18T14:51:02+00:00 | 58.920 GB | 418.109 MB | 7.743 MB | 69.772 kB | 233.248 MB | 464.738 MB | 74311457 | ipscn (8) | - | /software/bi/biocore_tools/git/singularity/iprscan/iprscan-5.48-83.0.sif | - | 1 | - | /nfs/users2/bi/thermoso/projects/Adorsata/FA-nf/work/cc/ac23559695a83bb2963249903ffafc |