Left reads: Input : 33519548 Mapped : 32642893 (97.4% of input) of these: 2456859 ( 7.5%) have multiple alignments (62198 have >20) Right reads: Input : 33519548 Mapped : 32482663 (96.9% of input) of these: 2441421 ( 7.5%) have multiple alignments (62312 have >20) 97.1% overall read mapping rate. Aligned pairs: 32034973 of these: 2407420 ( 7.5%) have multiple alignments 587227 ( 1.8%) are discordant alignments 93.8% concordant pair alignment rate.