Left reads: Input : 33885097 Mapped : 32944647 (97.2% of input) of these: 2354181 ( 7.1%) have multiple alignments (28875 have >20) Right reads: Input : 33885097 Mapped : 32847296 (96.9% of input) of these: 2340379 ( 7.1%) have multiple alignments (28910 have >20) 97.1% overall read mapping rate. Aligned pairs: 32353149 of these: 2305828 ( 7.1%) have multiple alignments 378779 ( 1.2%) are discordant alignments 94.4% concordant pair alignment rate.