Left reads: Input : 35459988 Mapped : 34009125 (95.9% of input) of these: 2587728 ( 7.6%) have multiple alignments (41360 have >20) Right reads: Input : 35459988 Mapped : 34035177 (96.0% of input) of these: 2584672 ( 7.6%) have multiple alignments (41435 have >20) 95.9% overall read mapping rate. Aligned pairs: 33479529 of these: 2536428 ( 7.6%) have multiple alignments 414037 ( 1.2%) are discordant alignments 93.2% concordant pair alignment rate.