skewer v0.2.2 [April 4, 2016]
COMMAND LINE:	skewer -t 8 -l 30 -n -u -o sim -z sim_read1.fastq.gz sim_read2.fastq.gz
Input file:	sim_read1.fastq.gz
Paired file:	sim_read2.fastq.gz
trimmed:	sim-trimmed-pair1.fastq.gz, sim-trimmed-pair2.fastq.gz

Parameters used:
-- 3' end adapter sequence (-x):	AGATCGGAAGAGCACACGTCTGAACTCCAGTCAC
-- paired 3' end adapter sequence (-y):	AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTA
-- maximum error ratio allowed (-r):	0.100
-- maximum indel error ratio allowed (-d):	0.030
-- minimum read length allowed after trimming (-l):	30
-- file format (-f):		Unknown format (auto detected)
-- number of concurrent threads (-t):	8
Tue Sep 19 14:19:02 2017 >> started

Tue Sep 19 14:19:18 2017 >> done (16.003s)
1000000 read pairs processed; of these:
      0 ( 0.00%) degenerative read pairs filtered out
      0 ( 0.00%) undetermined read pairs filtered out by contaminant control
      0 ( 0.00%) short read pairs filtered out after trimming by size control
      0 ( 0.00%) empty read pairs filtered out after trimming by size control
1000000 (100.00%) read pairs available; of these:
      8 ( 0.00%) trimmed read pairs available after processing
 999992 (100.00%) untrimmed read pairs available after processing

Length distribution of reads after trimming:
length	count	percentage
 48	      5	  0.00%
 49	      3	  0.00%
 50	 999992	100.00%